Clone Information

BLAST Search Result

Clone Name	bastl11g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocy...	141	5e-34
2	VGLC_BHV1C (P14378) Glycoprotein GIII precursor	33	0.18
3	NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p...	33	0.23
4	NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4...	33	0.23
5	E2F1_CHICK (Q90977) Transcription factor E2F1 (E2F-1)	33	0.23
6	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	32	0.39
7	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	32	0.39
8	CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding...	32	0.51
9	CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding p...	32	0.51
10	CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding...	32	0.51
11	CD2_RAT (P08921) T-cell surface antigen CD2 precursor (T-cell su...	31	0.67
12	MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)	31	0.67
13	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	31	0.87
14	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	31	0.87
15	CF015_MACMU (Q9BGL9) Protein C6orf15 homolog precursor (rmSTG)	30	1.1
16	ERF_HUMAN (P50548) ETS domain-containing transcription factor ER...	29	2.5
17	XYLT1_CANFA (Q5QQ56) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyl...	29	3.3
18	SELD_PSESM (Q889F7) Selenide, water dikinase (EC 2.7.9.3) (Selen...	28	4.3
19	DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein...	28	4.3
20	FA84A_BOVIN (Q3ZCA1) Protein FAM84A	28	4.3
21	CD123_YEAST (Q05791) Cell division cycle protein 123	28	4.3
22	BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated ...	28	4.3
23	KIF3C_MOUSE (O35066) Kinesin-like protein KIF3C	28	5.6
24	RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase rad...	28	5.6
25	GCSH_STRAW (Q82JI1) Glycine cleavage system H protein	28	7.4
26	PPK_STRGR (Q9EUS8) Polyphosphate kinase (EC 2.7.4.1) (Polyphosph...	28	7.4
27	PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain...	28	7.4
28	GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondri...	28	7.4
29	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	28	7.4
30	BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-b...	28	7.4
31	YNL4_SCHPO (Q9P6S3) Hypothetical protein C27.04 in chromosome II	28	7.4
32	RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)	27	9.6
33	CBID_METMA (Q8PWA9) Putative cobalt-precorrin-6A synthase [deace...	27	9.6
34	INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase...	27	9.6
35	AFAD_HUMAN (P55196) Afadin (AF-6 protein)	27	9.6
36	SH22A_HUMAN (Q9NP31) SH2 domain protein 2A (T cell-specific adap...	27	9.6
37	CF136_RAT (Q6MG12) Protein C6orf136 homolog	27	9.6
38	LARP1_HUMAN (Q6PKG0) La-related protein 1 (La ribonucleoprotein ...	27	9.6
39	Y1732_AQUAE (O67622) UPF0144 protein aq_1732	27	9.6
40	RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)	27	9.6
41	B3AT_RAT (P23562) Band 3 anion transport protein (Anion exchange...	27	9.6
42	QUEA_GLOVI (Q7NFD9) S-adenosylmethionine:tRNA ribosyltransferase...	27	9.6

>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex|
           component Sec8)
          Length = 1053

 Score =  141 bits (355), Expect = 5e-34
 Identities = 65/82 (79%), Positives = 74/82 (90%)
 Frame = +2

Query: 98  GIFDGLPIPPDKSYLEEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLI 277
           GIF+GLP+P DK+YL E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I  LKEQSD++
Sbjct: 2   GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61

Query: 278 EDVVDEVVHAYHHGFNKAIQNY 343
           E+VVDEVVHAYH GFNKAIQNY
Sbjct: 62  EEVVDEVVHAYHGGFNKAIQNY 83

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>VGLC_BHV1C (P14378) Glycoprotein GIII precursor|
          Length = 521

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
 Frame = +1

Query: 22  SPVSPDLAP---LPGSRLAVGNDEPP-------PAWHLRRPPNSARQILPGGRAVADRRG 171
           +P SPD  P    PG+   VG  EPP       P  +   PP       PGG   A R G
Sbjct: 57  TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116

Query: 172 MGSG 183
             SG
Sbjct: 117 RPSG 120

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>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 19   YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVAD--RRGMGSG 183
            YS  S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 891  YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947

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>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 19   YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVAD--RRGMGSG 183
            YS  S + AP P          P PA+   RPP      +P  RA AD  RR  G+G
Sbjct: 891  YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947

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>E2F1_CHICK (Q90977) Transcription factor E2F1 (E2F-1)|
          Length = 403

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 27/60 (45%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = -3

Query: 182 PLPIPRRSATALPPGKICLAELGGRRRCHAGGGSSLPTAR---RDPGRGARS-GETGLYE 15
           P P PRR A   PP K  L         H     SLP AR   R PGRGA+S GE   YE
Sbjct: 51  PGPAPRRPALGRPPVKRKL----NLETDHQYIAESLPAARGRARIPGRGAKSPGEKSRYE 106

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 25   PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 25   PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141
            P +P  AP P S L VG    PP+  +R PP  A ++LP
Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035

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>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
           (GTP-binding and GTPase activating protein 2) (GGAP2)
          Length = 1192

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
 Frame = +1

Query: 13  LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRGMGSGX 186
           LS +P SP   ++P PG RL++    P P       P+S     PGG   + RR      
Sbjct: 93  LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142

Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261
                     P L  P W  P P+G
Sbjct: 143 ----------PLLSSPSWGGPEPEG 157

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>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
 Frame = +1

Query: 13  LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRGMGSGX 186
           LS +P SP   ++P PG RL++    P P       P+S     PGG   + RR      
Sbjct: 93  LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142

Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261
                     P L  P W  P P+G
Sbjct: 143 ----------PLLSSPSWGGPEPEG 157

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>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
 Frame = +1

Query: 13  LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRGMGSGX 186
           LS +P SP   ++P PG RL++    P P       P+S     PGG   + RR      
Sbjct: 93  LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142

Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261
                     P L  P W  P P+G
Sbjct: 143 ----------PLLSSPSWGGPEPEG 157

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>CD2_RAT (P08921) T-cell surface antigen CD2 precursor (T-cell surface|
           antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (OX-34
           antigen)
          Length = 344

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +1

Query: 4   SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRG 171
           S P S +PV+    P PG  L      P P  H  R     ++  P G  V  ++G
Sbjct: 264 SAPASQNPVASQAPPPPGHHLQTPGHRPLPPSHRNREHQPKKRPPPSGTQVHQQKG 319

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>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)|
          Length = 489

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
 Frame = +2

Query: 44  RLSPGPASPSVTMNRHRRGIFDGLP-------IPPD---KSYLEEGLSRIDEGWAAARFD 193
           ++SP P  PS++M R    I+  LP       + P    KS     +S++      + F 
Sbjct: 83  KVSPRPTPPSLSMRRSEASIYT-LPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFS 141

Query: 194 SLPHV--VHILTSKDRDGEIQFLKEQSDLI 277
             PH+  VH L+ K +D +++ ++ +S  I
Sbjct: 142 EKPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171

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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 25   PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039

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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 25   PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141
            P +P  AP P S L VG    PP   +R PP  A ++LP
Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036

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>CF015_MACMU (Q9BGL9) Protein C6orf15 homolog precursor (rmSTG)|
          Length = 314

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +1

Query: 4   SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSAR-----QILPGGRAVADR 165
           SY  S + ++P   PLPG       D  P A HL +   S R      + PGG+ ++ R
Sbjct: 136 SYLSSAAALAPGSGPLPGESSPDATDLSPEASHLHQDSESRRLPRSNPLGPGGKILSQR 194

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>ERF_HUMAN (P50548) ETS domain-containing transcription factor ERF (Ets2|
           repressor factor)
          Length = 548

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +1

Query: 25  PVSPDLAPLPGSRLAVGNDEPPP-AWHLRRPPNSARQILPGGRAV--ADRRGMGSG 183
           P++P+  P+P S  +  +    P  + L+ PP   RQ   G +AV  AD+ G  +G
Sbjct: 352 PMAPETPPVPSSASSSSSSSSSPFKFKLQPPPLGRRQRAAGEKAVAGADKSGGSAG 407

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>XYLT1_CANFA (Q5QQ56) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)|
           (Peptide O-xylosyltransferase 1)
          Length = 950

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/41 (43%), Positives = 18/41 (43%)
 Frame = -3

Query: 182 PLPIPRRSATALPPGKICLAELGGRRRCHAGGGSSLPTARR 60
           P P PRR    LPPG    A LG    C  GGG   P   R
Sbjct: 61  PAPAPRRERRDLPPGP--AAPLGA---CCGGGGRGPPARAR 96

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>SELD_PSESM (Q889F7) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate|
           synthetase) (Selenium donor protein)
          Length = 344

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 112 PPNSARQILPGGRAVADRRGM 174
           PP  AR+++ GGRAV D  G+
Sbjct: 113 PPEVAREVIRGGRAVCDAAGI 133

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>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 662

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -1

Query: 169 LVDPRQPFLQV-RFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 41
           ++ PR  F  + RFV R+WE +ED++ +AV  Y  R   RG+ R
Sbjct: 59  VLSPRNTFSNLKRFVGRDWEELEDSS-LAV-PYTVRANDRGQVR 100

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>FA84A_BOVIN (Q3ZCA1) Protein FAM84A|
          Length = 297

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +2

Query: 110 GLPIPPDKSYLEEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 283
           G   P  + YL+  L+  D     ARF SL  ++      D  G ++ L+E +DL++D
Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295

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>CD123_YEAST (Q05791) Cell division cycle protein 123|
          Length = 360

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 212 HILTSKDRD-GEIQFLKEQSDLIEDVVDEVVH 304
           HI+ +  RD     +L E SD  +D++DE+VH
Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237

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>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein|
          Length = 653

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 7   YPLSYSPV--SPDLAPL-PGSRLAVGNDEPPPAWHLRRPPNSARQILPGGR 150
           +P + SP    P   PL PG + A+    PP  W+LR  P SAR +   GR
Sbjct: 422 FPRTVSPFPGEPFRFPLSPGPQPAL---MPPNLWNLRAKPGSARLVAGAGR 469

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>KIF3C_MOUSE (O35066) Kinesin-like protein KIF3C|
          Length = 796

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -3

Query: 140 GKICLAELGGRRRCH------AGGGSSLPTARRDPGRGARSGETGLYER 12
           GK+ L +L G  R +      AGG ++ PTA    G G+ SG     ER
Sbjct: 240 GKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGER 288

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>RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase radical fringe|
           (EC 2.4.1.222) (O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase)
          Length = 372

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   TSYPLSYSPVSPDLAPLP-GSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRGMG 177
           T + LS +  +  L  LP G   A     PPPA   R  P+  R+  P G  V   RG G
Sbjct: 11  TCFLLSVTAAAVLLLLLPRGQPPAAPRRRPPPAGPSR--PSPKREARPAGSDVPGDRGGG 68

Query: 178 SG 183
           SG
Sbjct: 69  SG 70

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>GCSH_STRAW (Q82JI1) Glycine cleavage system H protein|
          Length = 125

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 197 LPHVVHILTSKDRDGEIQFLKEQSDLIEDVVDEVVHA 307
           LP V   +T+ +  GE++  K  SDL   V  EVV A
Sbjct: 44  LPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVVEA 80

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>PPK_STRGR (Q9EUS8) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid|
           kinase) (ATP-polyphosphate phosphotransferase)
           (Fragment)
          Length = 703

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = -1

Query: 202 RQRVEPRRCPSLVDPRQPFLQVRFVWRNWEAVEDATPVAVHRYRRR 65
           RQRV P   P  VDP  PF  +  +  N  AV    PV+ HR+  R
Sbjct: 148 RQRVFPVLTPLAVDPAHPFPYISGLSLNL-AVVVRNPVSGHRHFAR 192

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>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Activated in prostate cancer protein)
          Length = 2839

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = -3

Query: 170  PRRSATALPPGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 39
            PRRS    P G +   E GG R C  G G     +  P++  D G  A+
Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565

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>GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondrial precursor|
          Length = 165

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
 Frame = +2

Query: 14  SRIAQSLQISRLSPGPASPSVTMNRHRRGIFDGLPIPPDKSYLEEGLSRIDEGWAAARFD 193
           S  A +L++S  S    SP+ +++R    + DGL   P   +++   S    G      D
Sbjct: 8   SSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQD 67

Query: 194 SLPHVVHI--------LTSKDRDGEIQFLKEQSDLIEDVVDEVV 301
            L  VV +        +T     G ++ +K  SD+   +  EV+
Sbjct: 68  HLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVI 111

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 4   SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPN 120
           S P +YSP  P   PLP S +      PPP +    PP+
Sbjct: 325 SPPPTYSPPPPTYLPLPSSPI---YSPPPPVYSPPPPPS 360

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>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding|
           protein) (AtBCB) (Stellacyanin) (Phytocyanin 1)
          Length = 196

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 46  PLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRG 171
           P PGS  + G   PP A     P  S+    P G A +   G
Sbjct: 140 PAPGSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAASSLGG 181

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>YNL4_SCHPO (Q9P6S3) Hypothetical protein C27.04 in chromosome II|
          Length = 1052

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 218 LTSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQN 340
           L +  RD   + LKE  D+IE+    +   +  GF++A +N
Sbjct: 354 LLASVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAEN 394

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>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)|
          Length = 150

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 VEDATPVAVHRYRRRGGTRG 50
           +ED TPV     RR+GG RG
Sbjct: 128 IEDVTPVPTDSTRRKGGRRG 147

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>CBID_METMA (Q8PWA9) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 339

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 5   PTPSRIAQSLQISRLSPGPASPSVTMNRHRRGIFDGL 115
           PTP  +   L++S  SPG A     +N H   I  GL
Sbjct: 74  PTPVGLRAHLEVSESSPGRAVVKKILNDHESDITRGL 110

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>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 644

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 116 PIPPDKSYLEEGLSRIDEGWAAARF 190
           P PP +  LE  LS  D+GW   RF
Sbjct: 72  PRPPARPRLERALSLDDKGWRRRRF 96

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>AFAD_HUMAN (P55196) Afadin (AF-6 protein)|
          Length = 1816

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +2

Query: 8    TPSRIAQSLQISRLSPGPASPSVTMNRHRRGIFDG----LPIPPDKSYLEEGL 154
            TP  ++Q ++   L P P  P V    H  G FDG    LP+PP  S  + GL
Sbjct: 1335 TPVAVSQPIRTD-LPPPPPPPPV----HYAGDFDGMSMDLPLPPPPSANQIGL 1382

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>SH22A_HUMAN (Q9NP31) SH2 domain protein 2A (T cell-specific adapter protein)|
           (TSAd) (VEGF receptor-associated protein) (SH2
           domain-containing adapter protein)
          Length = 389

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 82  EPPPAWHLRRPPNSARQIL 138
           +PPPAW    P N +RQ+L
Sbjct: 357 QPPPAWRHTLPHNLSRQVL 375

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>CF136_RAT (Q6MG12) Protein C6orf136 homolog|
          Length = 172

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 16  SYSPVSPDLAPLPGSRLAVGNDEPPPAWHL 105
           S+SP +P    L G+ +A+G  EP P+ HL
Sbjct: 139 SHSPSTPVKKLLVGALVALGLSEPEPSLHL 168

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>LARP1_HUMAN (Q6PKG0) La-related protein 1 (La ribonucleoprotein domain family|
           member 1)
          Length = 1096

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = +1

Query: 16  SYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPGGRAVADRRGMGSG 183
           +Y PV+P   P P  +  +   +P PAWH +   +S +    GG A A  RG G G
Sbjct: 295 TYVPVAP---PTPAWQPEI---KPEPAWHDQDETSSVKSDGAGG-ARASFRGRGRG 343

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>Y1732_AQUAE (O67622) UPF0144 protein aq_1732|
          Length = 558

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = -1

Query: 220 EDVHDVRQRVEPRRCPSLVDPRQPFLQVRFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 41
           E+V  +++ VE R+            + R + R WEA+E      +HR R       E +
Sbjct: 92  EEVERIKEEVERRKKELKEREENVLAKERHLDRRWEALEKREEELLHRER-------ELK 144

Query: 40  DLER 29
           D ER
Sbjct: 145 DFER 148

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>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)|
          Length = 149

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 VEDATPVAVHRYRRRGGTRG 50
           +ED TPV     RR+GG RG
Sbjct: 127 IEDVTPVPTDSTRRKGGRRG 146

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>B3AT_RAT (P23562) Band 3 anion transport protein (Anion exchange protein 1)|
           (AE 1) (Solute carrier family 4 member 1) (CD233
           antigen)
          Length = 927

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 73  GNDEPPPAWHLRRPPNSARQILPGGRA 153
           G++EP P+  L+ PPNS   ++  GRA
Sbjct: 221 GSEEPSPSGILKIPPNSETTLVLVGRA 247

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>QUEA_GLOVI (Q7NFD9) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 352

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 124 RNWEAVEDATPVAVHRYRRRGG 59
           R W  + +AT +A+ R R RGG
Sbjct: 232 REWYEIPEATAIAIERTRSRGG 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.138    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,336,477
Number of Sequences: 219361
Number of extensions: 1035383
Number of successful extensions: 3148
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3145
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result