ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... 30 2.2
2MUC1_YEAST (P08640) Mucin-like protein 1 precursor 29 3.7
3PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... 28 4.8
4FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 28 6.3
5Y220_SILPO (Q5LX20) UPF0247 protein SPO0220 28 6.3

>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)|
           (Carboxypeptidase H) (CPH) (Enkephalin convertase)
           (Prohormone-processing carboxypeptidase)
          Length = 476

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 18  SLAACVWRLQAIREARGRPARHCRGQRRLRQ 110
           +LAAC W L A  +  G PA   R +RRL+Q
Sbjct: 15  ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45



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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +2

Query: 77  APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 205
           AP+P P+SSS + +  PSS  F                 S+ P
Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906



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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%)
 Frame = -2

Query: 117 VATVEDDAGRGSGAPA----------GLELHVLPAAA 37
           +A+V D  GRG G PA          GL L+++PAAA
Sbjct: 17  IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53



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>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 59  SSRPAGAPLPRPASSSTVATRHPSSFS 139
           +++PA  P+P PA++   AT+ PSS S
Sbjct: 207 AAQPAPVPVPAPAATPKAATQAPSSRS 233



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>Y220_SILPO (Q5LX20) UPF0247 protein SPO0220|
          Length = 156

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 120 RVATVEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 7
           RV  VED    G GA A L    LPA A    L+ + K
Sbjct: 40  RVVEVEDKKNAGMGAEAALLRKALPAGAVLCTLDERGK 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,303,993
Number of Sequences: 219361
Number of extensions: 267796
Number of successful extensions: 1202
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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