Clone Information

BLAST Search Result

Clone Name	bastl11f12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein)	34	0.073
2	SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor	33	0.13
3	HIS42_SILPO (Q5LR59) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam...	32	0.48
4	KGUA_ACIAD (Q6F7H0) Guanylate kinase (EC 2.7.4.8) (GMP kinase)	31	0.81
5	RS14_RAT (P13471) 40S ribosomal protein S14	30	1.1
6	RS14_MOUSE (P62264) 40S ribosomal protein S14	30	1.1
7	RS14_HUMAN (P62263) 40S ribosomal protein S14	30	1.1
8	RS14_CRIGR (P62265) 40S ribosomal protein S14	30	1.1
9	K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297	30	1.4
10	ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase...	30	1.8
11	RS14_KLULA (P27069) 40S ribosomal protein S14 (RP59)	30	1.8
12	YM2A_CAEEL (P34447) Hypothetical protein F54F2.2, isoform a	29	3.1
13	WOX4_ARATH (Q6X7J9) WUSCHEL-related homeobox 4	29	3.1
14	RS14_CHLRE (P46295) 40S ribosomal protein S14	29	3.1
15	TRAM4_ECOLI (Q00186) Protein traM	28	4.0
16	RS14_PROCL (P48855) 40S ribosomal protein S14	28	4.0
17	RS14_PODCA (Q08699) 40S ribosomal protein S14	28	4.0
18	GALT9_MACFA (Q9GM01) Polypeptide N-acetylgalactosaminyltransfera...	28	4.0
19	DPOE_CRYNE (Q5K9M7) DNA polymerase epsilon, catalytic subunit A ...	28	4.0
20	TNR6B_HUMAN (O95407) Tumor necrosis factor receptor superfamily ...	28	4.0
21	RS14A_YEAST (P06367) 40S ribosomal protein S14-A (RP59A)	28	4.0
22	RS14B_YEAST (P39516) 40S ribosomal protein S14-B (RP59B)	28	4.0
23	MURG_CAUCR (Q9A5A1) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	28	5.3
24	RS14_CAEEL (P48150) 40S ribosomal protein S14	28	5.3
25	SYMPK_HUMAN (Q92797) Symplekin	28	5.3
26	RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)	28	5.3
27	RS14_CANAL (Q96W53) 40S ribosomal protein S14	28	5.3
28	RS143_ARATH (P42036) 40S ribosomal protein S14-3	28	5.3
29	RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)	28	5.3
30	RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2	28	5.3
31	RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1	28	5.3
32	UBP2_YEAST (Q01476) Ubiquitin carboxyl-terminal hydrolase 2 (EC ...	28	6.9
33	SYE2_HELPY (O25360) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1...	28	6.9
34	SYE2_HELPJ (Q9ZLJ1) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1...	28	6.9
35	HORN_HUMAN (Q86YZ3) Hornerin	28	6.9
36	DHRS3_HUMAN (O75911) Short-chain dehydrogenase/reductase 3 (EC 1...	28	6.9
37	DHRS3_BOVIN (O77769) Short-chain dehydrogenase/reductase 3 (EC 1...	28	6.9
38	RS14_NEUCR (P19115) 40S ribosomal protein S14 (CRP2)	28	6.9
39	GCC7_CAEEL (Q21770) Germ cell expressed protein R06C7.1	23	8.2
40	CP126_MYCTU (P63711) Putative cytochrome P450 126 (EC 1.14.-.-)	27	9.0
41	CP126_MYCBO (P63712) Putative cytochrome P450 126 (EC 1.14.-.-)	27	9.0
42	SYI_XANOR (Q5H2E1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	27	9.0
43	SYI_XANC5 (Q3BW42) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	27	9.0
44	DHRS3_MOUSE (O88876) Short-chain dehydrogenase/reductase 3 (EC 1...	27	9.0
45	SIPA1_MOUSE (P46062) Signal-induced proliferation-associated pro...	27	9.0
46	PDXH_WOLPM (Q73G09) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3....	27	9.0
47	ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disinteg...	27	9.0
48	TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC...	27	9.0
49	LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa...	27	9.0

>REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein)|
          Length = 619

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 168 LPSSSWTSLAD*SPNSPQIPPLS----REIPNLAHGRRPWCRAP 287
           LPSSSW+S+A  +P S    PLS    R +P+ + G  P+ R P
Sbjct: 407 LPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLRIP 450

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>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor|
          Length = 297

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/80 (28%), Positives = 28/80 (35%)
 Frame = +3

Query: 72  DTHPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPN 251
           +T PP+    P  C  +   C      PK    P +  T      P     PP  R  P 
Sbjct: 39  ETEPPRCETEPPRCETEPPRC--ETTTPKCETTPPTCRTE----PPTCKTEPPTCRTEPP 92

Query: 252 LAHGRRPWCRAPTPTCLTWP 311
               + P CR   PTC T P
Sbjct: 93  TCKTKPPTCRTEPPTCRTEP 112



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 23/79 (29%), Positives = 27/79 (34%)
 Frame = +3

Query: 75  THPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPNL 254
           T PP  +  P  C  +   C  R   P  +  P +  T      P     PP  R  P  
Sbjct: 89  TEPPTCKTKPPTCRTEPPTC--RTEPPTCKTKPPTCKTE----PPTCKTEPPTCRTEPPT 142

Query: 255 AHGRRPWCRAPTPTCLTWP 311
                P CR   PTC T P
Sbjct: 143 CKTEPPTCRTEPPTCKTEP 161



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/79 (27%), Positives = 27/79 (34%)
 Frame = +3

Query: 75  THPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPNL 254
           T PP+    P  C  +   C      P+    P    T+    +P     PP  R  P  
Sbjct: 26  TEPPRCETEPPRCETEPPRCETEP--PRCETEPPRCETT----TPKCETTPPTCRTEPPT 79

Query: 255 AHGRRPWCRAPTPTCLTWP 311
                P CR   PTC T P
Sbjct: 80  CKTEPPTCRTEPPTCKTKP 98



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/79 (27%), Positives = 26/79 (32%)
 Frame = +3

Query: 75  THPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPNL 254
           T PP  R  P  C  +   C      P  +  P +  T      P     PP  R  P  
Sbjct: 103 TEPPTCRTEPPTCKTKPPTCKTEP--PTCKTEPPTCRTE----PPTCKTEPPTCRTEPPT 156

Query: 255 AHGRRPWCRAPTPTCLTWP 311
                P C+   PTC T P
Sbjct: 157 CKTEPPTCKTEPPTCKTEP 175

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>HIS42_SILPO (Q5LR59) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase 2 (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase 2)
          Length = 247

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 179 GRREAPIFWHTVPGETVEGLGSAATR--HPPDL 87
           GR +AP+ WH  P ETV G  SA     H  DL
Sbjct: 20  GRLDAPMLWHVDPFETVSGWASAGAEWMHLTDL 52

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>KGUA_ACIAD (Q6F7H0) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 207

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 264 SREQDSGFREKGEGFGENWGFNQRAKSRRKKGGADILAHSSWR 136
           S+ +D+GF E  E FG  +G +Q    ++   G D+L    W+
Sbjct: 61  SQVEDNGFIEYAEVFGNYYGTSQATVKQQLAKGHDVLLEIDWQ 103

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>RS14_RAT (P13471) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_MOUSE (P62264) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_HUMAN (P62263) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_CRIGR (P62265) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297|
          Length = 1411

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +1

Query: 4   RVGLGLLG*AQRERERETD-----AVSKTHTHPRSGGCLVAAEPRPSTVSPGTVCQNIGA 168
           R GL + G ++R   ++ +      VS+T     S    VA+EPR  + S  +   + G+
Sbjct: 363 RDGLEMSGCSERVHVQQAEKLPGATVSETRLRGSSMASSVASEPRSRSSSLNST--DSGS 420

Query: 169 SLLPPGLRSLIE 204
            LLPPGL++  E
Sbjct: 421 GLLPPGLQATPE 432

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>ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase ATXR3 (EC|
           2.1.1.43) (Trithorax-related protein 3) (TRX-related
           protein 3) (Protein SET DOMAIN GROUP 2)
          Length = 2351

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 237 EKGEGFGENWGFNQRAKSRRK-KGGADILAHSSWRD 133
           EKGE  GE+W  ++  K+ +  KGG +     SWRD
Sbjct: 174 EKGEIVGESWKKDEPTKADKNWKGGKEEREFRSWRD 209

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>RS14_KLULA (P27069) 40S ribosomal protein S14 (RP59)|
          Length = 137

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +RS TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 89  TRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133

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>YM2A_CAEEL (P34447) Hypothetical protein F54F2.2, isoform a|
          Length = 867

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +1

Query: 31  AQRERERETDAVSKTHTHPRSGGCLVAAEPRPSTV----SPGTVCQNIGASLLPPGLRSL 198
           A+R R+ + D + KTH  PR       A  RP  V    S G+    +G S     L++L
Sbjct: 433 AKRIRDSKNDMMDKTHKRPR-------ANARPPAVLGSMSSGSSGGTVGKSPSMQRLQNL 485

Query: 199 IEAPILPKSLPFLAKSRI 252
           + API+ +++    + R+
Sbjct: 486 V-APIVSETVTDFQRDRV 502

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>WOX4_ARATH (Q6X7J9) WUSCHEL-related homeobox 4|
          Length = 251

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 9   RPWPTGVSTKRERERDGRSEQDTHPPQVRWMP 104
           RP  TG  TK E +RD   + +THP   RW P
Sbjct: 63  RPDQTG-PTKFEHKRDPPHQLETHPGGTRWNP 93

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>RS14_CHLRE (P46295) 40S ribosomal protein S14|
          Length = 153

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 105 NRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRR 149

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>TRAM4_ECOLI (Q00186) Protein traM|
          Length = 144

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 279 DTMASSREQDSGFREKGEGFGENWGFNQRAKSRRKKGGA 163
           D+ A   E  + F+E+ EG    WG + +AK+ R    A
Sbjct: 38  DSAAKQEEILAAFKEELEGIAHRWGEDAKAKAERMLNAA 76

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>RS14_PROCL (P48855) 40S ribosomal protein S14|
          Length = 151

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 103 NKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDSTRRKGGRR 147

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>RS14_PODCA (Q08699) 40S ribosomal protein S14|
          Length = 151

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       S   R  GGRR
Sbjct: 103 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCTRRKGGRR 147

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>GALT9_MACFA (Q9GM01) Polypeptide N-acetylgalactosaminyltransferase 9 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           9) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 9) (Polypeptide GalNAc
           transferase 9) (GalNAc-T9) (pp-GaNTase 9)
          Length = 606

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 67  SKTHTHPRSGGCLVAAEPRPSTVSPGTVCQNIGASLLPPGLRSLIEAPILP 219
           S+    P SGGC     PRP+T +PG+  ++ G   +  G   L+    LP
Sbjct: 34  SQELVRPLSGGC----RPRPATPAPGSPLRSGGPRAVVAGRAELVLKGQLP 80

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>DPOE_CRYNE (Q5K9M7) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
           (DNA polymerase II subunit A)
          Length = 2250

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 243 FREKGEGFGENWGFNQRAKSRRK-KGGADILAHSSWRDS*RPGLSSNKAS 97
           FR +G G G  +G N R   RR+ +GG       ++    RP  S+N+A+
Sbjct: 7   FRGRGRGSGSGFGSNTRFTGRRRGRGGGGGGGGVAYGIDRRPATSTNQAN 56

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>TNR6B_HUMAN (O95407) Tumor necrosis factor receptor superfamily member 6B|
           precursor (Decoy receptor for Fas ligand) (Decoy
           receptor 3) (DcR3) (M68)
          Length = 300

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 11/60 (18%)
 Frame = +1

Query: 40  ERERETDAVSKTHTHP---------RSGGCLVAAE--PRPSTVSPGTVCQNIGASLLPPG 186
           ERE E  A   TH             +G CL  A   P    ++PGT  QN      PPG
Sbjct: 97  EREEEARACHATHNRACRCRTGFFAHAGFCLEHASCPPGAGVIAPGTPSQNTQCQPCPPG 156

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>RS14A_YEAST (P06367) 40S ribosomal protein S14-A (RP59A)|
          Length = 136

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 88  TRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 132

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>RS14B_YEAST (P39516) 40S ribosomal protein S14-B (RP59B)|
          Length = 137

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 89  TRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133

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>MURG_CAUCR (Q9A5A1) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 361

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 151 CQNIGASLLPPGLRSLIEAPILPKSLPFLAKSRILLTGGGHGVELL 288
           C ++  + + P +R+L + P L   +      R+L+TGG  G  LL
Sbjct: 157 CAHVVGNPVRPPVRALFDVPYLAPEVQL----RVLVTGGSQGARLL 198

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>RS14_CAEEL (P48150) 40S ribosomal protein S14|
          Length = 152

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +R+ TP P   S +R  AR G  +GRI       S   R  GGRR
Sbjct: 104 TRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCTRRKGGRR 148

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>SYMPK_HUMAN (Q92797) Symplekin|
          Length = 1274

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 290  SRSSTPWPPPVSKIRDFARKGRDLGRIGASISERSPGGRREAPIFWHTVPG 138
            S S+ P PPP  +  DF  +G +    G  IS     G  EA +   ++ G
Sbjct: 1175 SPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLEG 1225

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>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)|
          Length = 149

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 101 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 145

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>RS14_CANAL (Q96W53) 40S ribosomal protein S14|
          Length = 134

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 86  TKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDSTRRKGGRR 130

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>RS143_ARATH (P42036) 40S ribosomal protein S14-3|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146

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>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 146

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>RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146

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>RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 290 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 171
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146

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>UBP2_YEAST (Q01476) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing
            protease 2) (Deubiquitinating enzyme 2)
          Length = 1272

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 238  RERGGIWGELGLQSASEVQEEE 173
            R R GIW +   ++ SEVQEEE
Sbjct: 1217 RNRNGIWRKYNDETISEVQEEE 1238

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>SYE2_HELPY (O25360) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1.-) (GluGlnRS)|
           (Glutamyl-tRNA synthetase 2) (Glutamate--tRNA ligase 2)
           (GluRS 2)
          Length = 439

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 220 KSLPFLAKSRILLTGGGHGVELLL 291
           K   F    RILLTG  HGVEL L
Sbjct: 399 KGKDFFKPLRILLTGNSHGVELPL 422

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>SYE2_HELPJ (Q9ZLJ1) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1.-) (GluGlnRS)|
           (Glutamyl-tRNA synthetase 2) (Glutamate--tRNA ligase 2)
           (GluRS 2)
          Length = 439

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 220 KSLPFLAKSRILLTGGGHGVELLL 291
           K   F    RILLTG  HGVEL L
Sbjct: 399 KGKDFFKPLRILLTGNSHGVELPL 422

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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = -1

Query: 267  SSREQDSGFREKGEGFGENWGFNQRAKSRRKKGGADILAHSSWRDS*RPGLSSNKAST*P 88
            S   Q SG+  +G G G++ G  QR    R+       + S  R     G SS+     P
Sbjct: 2047 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ-------SPSYGRHGSGSGRSSSSGQHGP 2099

Query: 87   GVG 79
            G+G
Sbjct: 2100 GLG 2102

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>DHRS3_HUMAN (O75911) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1) (DD83.1)
          Length = 302

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 211 ILPKSLPFLAKSRILLTGGGHGV 279
           +LP  L  L++  +L+TGGG G+
Sbjct: 28  VLPAKLRDLSRENVLITGGGRGI 50

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>DHRS3_BOVIN (O77769) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 211 ILPKSLPFLAKSRILLTGGGHGV 279
           +LP  L  L++  +L+TGGG G+
Sbjct: 28  VLPAKLRDLSRENVLITGGGRGI 50

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>RS14_NEUCR (P19115) 40S ribosomal protein S14 (CRP2)|
          Length = 150

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
 Frame = -2

Query: 278 TPWPPPVSKIRDFARKGRDLGRI-----GASISERSPGGRR 171
           TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 106 TPGPGAQSALRALARSGMKIGRIEDVTPTPSDSTRRKGGRR 146

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>GCC7_CAEEL (Q21770) Germ cell expressed protein R06C7.1|
          Length = 945

 Score = 23.1 bits (48), Expect(2) = 8.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 281 STPWPPPVSKIRDFARKGRDL 219
           ST  P P+    ++A++GRDL
Sbjct: 884 STSIPTPLYVANEYAKRGRDL 904



 Score = 22.7 bits (47), Expect(2) = 8.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 223 IWGELGLQSASEVQEEEGRR 164
           +WGEL  +   E +E +G R
Sbjct: 904 LWGELTTKGPIEAKESQGER 923

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>CP126_MYCTU (P63711) Putative cytochrome P450 126 (EC 1.14.-.-)|
          Length = 414

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 176 RREAPIFWHTVPGETVEGLG 117
           RREAP++WH     T +G G
Sbjct: 31  RREAPVYWHRPTEHTPDGEG 50

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>CP126_MYCBO (P63712) Putative cytochrome P450 126 (EC 1.14.-.-)|
          Length = 414

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 176 RREAPIFWHTVPGETVEGLG 117
           RREAP++WH     T +G G
Sbjct: 31  RREAPVYWHRPTEHTPDGEG 50

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>SYI_XANOR (Q5H2E1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 943

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -2

Query: 260 VSKIRDFARKGRDLGRIGASISERSPGGRREAPIFWHTVP 141
           VS   D A   RD G + A+     PGG   A   W T P
Sbjct: 207 VSPTVDIAYPARDPGAVAAAFGATLPGGVGVAVPIWTTTP 246

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>SYI_XANC5 (Q3BW42) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 943

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -2

Query: 260 VSKIRDFARKGRDLGRIGASISERSPGGRREAPIFWHTVP 141
           VS   D A   RD G + A+   R P G   A   W T P
Sbjct: 207 VSPTVDIAYPARDPGAVAAAFGARLPAGVGVAVPIWTTTP 246

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>DHRS3_MOUSE (O88876) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 211 ILPKSLPFLAKSRILLTGGGHGV 279
           +LP  L  L++  +L+TGGG G+
Sbjct: 28  VLPPKLRDLSRESVLITGGGRGI 50

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>SIPA1_MOUSE (P46062) Signal-induced proliferation-associated protein 1 (Sipa-1)|
           (GTPase-activating protein Spa-1)
          Length = 1037

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
 Frame = +1

Query: 109 AAEPRPSTVSPGTVCQNIGASLLPPGLRSLIEAPILPKS--------LPFLAKSRILLTG 264
           A  P P +VSP  + +++   L P  LR    +P +P+         L F  K  IL   
Sbjct: 277 ALPPGPPSVSPRKLLEHVAPRLSPTCLRLGSASPKVPRQLLTLDEQVLSFQRKGGILYCR 336

Query: 265 GGHGVE 282
            G G E
Sbjct: 337 AGQGSE 342

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>PDXH_WOLPM (Q73G09) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP|
           oxidase) (PNPOx)
          Length = 216

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = -3

Query: 214 ELGLQSASEVQEEEGRRRYFGTQFLARQLKAWAQQQQGIHLTW 86
           ++ ++   ++  +E   +YF ++ L  Q+ AW  +Q  I   W
Sbjct: 108 QVRIEGEVKLLNDERTDKYFSSRALGSQISAWCSKQSSILKDW 150

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>ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase domain 19) (Meltrin beta)
          Length = 920

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
 Frame = +3

Query: 60   RSEQDTHPPQVRWMPC---CC*AQAFN-------CLARNCVPKYRRLPSSSWTSLAD*SP 209
            R E    PP  R MP    C  +Q F+        L  N VP  R  P S  TSL     
Sbjct: 829  RKESARRPPPSRPMPPAPNCLLSQDFSRPRPPQKALPANPVPGQRTGPRSGGTSLLQPPT 888

Query: 210  NSPQIP-PLSREIPNLAHGR 266
            + PQ P P +  +P L   R
Sbjct: 889  SGPQPPRPPAVPVPKLPEYR 908

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>TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC 2.7.13.3)|
           (NHK1 protein) (SLN1 homolog)
          Length = 1070

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 3   SSRPWPTGVSTKRERERDGRSEQDTHPPQVR 95
           SSRP      T  +R RDG  E+ T PP +R
Sbjct: 745 SSRP-----KTSLDRPRDGGDEETTRPPNLR 770

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>LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa autoantigen|
           D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3)
           (Thyroid-associated ophthalmopathy autoantigen) (Smooth
           muscle leiomodin) (SM-Lmod)
          Length = 572

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 85  PRSGGCLVAAEPRPSTVSPGTVCQNIGASLLPPGLRSL 198
           P+ GG   A  P P  ++P  + +N+  SL P   R +
Sbjct: 497 PKKGGAPAAPPPPPPPLAPPLIMENLKNSLSPATQRKM 534


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,585,385
Number of Sequences: 219361
Number of extensions: 1066262
Number of successful extensions: 3755
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3741
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result