>dbj|AB168794.1| Macaca fascicularis testis cDNA, clone: QtsA-14815, similar to
          human zinc finger protein 451 (ZNF451), mRNA, RefSeq:
          NM_015555.1
          Length = 2330

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 2  atcgagtcggccttggcctactgg 25
          ||||||||||||||||||||||||
Sbjct: 3  atcgagtcggccttggcctactgg 26

>ref|NM_187597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2583

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 284 tcctactccaacctgcttgacctggcc 310
           ||||||||||||||||| |||||||||
Sbjct: 13  tcctactccaacctgctggacctggcc 39

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 284     tcctactccaacctgcttgacctggcc 310
               ||||||||||||||||| |||||||||
Sbjct: 6490712 tcctactccaacctgctggacctggcc 6490686

>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 284   tcctactccaacctgcttgacctggcc 310
             ||||||||||||||||| |||||||||
Sbjct: 33474 tcctactccaacctgctggacctggcc 33448

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 284     tcctactccaacctgcttgacctggcc 310
               ||||||||||||||||| |||||||||
Sbjct: 6489925 tcctactccaacctgctggacctggcc 6489899

>gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome 16, complete sequence
          Length = 156977

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     agacacacacccaccccaggt 91
              |||||||||||||||||||||
Sbjct: 147173 agacacacacccaccccaggt 147153

>gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome 16, complete
            sequence
          Length = 252926

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 71   agacacacacccaccccaggt 91
            |||||||||||||||||||||
Sbjct: 2063 agacacacacccaccccaggt 2043

>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence
          Length = 181705

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    cgggaggaggccatggtgtc 279
              ||||||||||||||||||||
Sbjct: 106586 cgggaggaggccatggtgtc 106567

>gb|AC091231.10| Homo sapiens chromosome 15, clone RP11-702L15, complete sequence
          Length = 187779

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    tggatgccttgttgctgctg 115
             ||||||||||||||||||||
Sbjct: 74265 tggatgccttgttgctgctg 74284

>emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C13 on chromosome 6q25.2-26
             Contains the 5' end of a novel gene, a hypothetical
             protein PNAS-131 pseudogene and a CpG island, complete
             sequence
          Length = 150336

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gcgcctcccttcttcctcct 183
             ||||||||||||||||||||
Sbjct: 12867 gcgcctcccttcttcctcct 12848

>dbj|AK125637.1| Homo sapiens cDNA FLJ43649 fis, clone SYNOV4001326
          Length = 3837

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gcgcctcccttcttcctcct 183
           ||||||||||||||||||||
Sbjct: 123 gcgcctcccttcttcctcct 142

>ref|XM_925812.1| PREDICTED: Homo sapiens hypothetical gene supported by AK125637
           (LOC401280), mRNA
          Length = 3823

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gcgcctcccttcttcctcct 183
           ||||||||||||||||||||
Sbjct: 117 gcgcctcccttcttcctcct 136

>gb|AC090425.15| Homo sapiens 3 BAC RP11-15L13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97868

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   cgcctcccttcttcctcctg 184
             ||||||||||||||||||||
Sbjct: 38628 cgcctcccttcttcctcctg 38609

>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174487

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   gcctcccttcttcctcctgg 185
             ||||||||||||||||||||
Sbjct: 85956 gcctcccttcttcctcctgg 85975

>ref|NM_001013682.1| Homo sapiens hypothetical gene supported by AK125637 (LOC401280),
           mRNA
          Length = 3837

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gcgcctcccttcttcctcct 183
           ||||||||||||||||||||
Sbjct: 123 gcgcctcccttcttcctcct 142

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     cgtggtcaccacgccggggc 395
               ||||||||||||||||||||
Sbjct: 2928350 cgtggtcaccacgccggggc 2928369

>emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chromosome 4, complete
           sequence
          Length = 206709

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 cccttcttcctcctggactt 189
           ||||||||||||||||||||
Sbjct: 786 cccttcttcctcctggactt 805

>emb|Z75742.1|HSLUCA10 Human DNA sequence from clone XXcos-10 on chromosome 3, complete
             sequence
          Length = 36016

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gctgctgagcccaggccttc 128
             ||||||||||||||||||||
Sbjct: 10812 gctgctgagcccaggccttc 10793

>emb|AL954151.8| Mouse DNA sequence from clone RP24-370P7 on chromosome 4, complete
            sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  cccttcttcctcctggactt 189
            ||||||||||||||||||||
Sbjct: 2780 cccttcttcctcctggactt 2799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,668,223
Number of Sequences: 3902068
Number of extensions: 2668223
Number of successful extensions: 60483
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60369
Number of HSP's gapped (non-prelim): 114
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)