Clone Name | bastl11e09 |
---|---|
Clone Library Name | barley_pub |
>TNPO2_HUMAN (O14787) Transportin-2 (Karyopherin beta-2b)| Length = 897 Score = 49.3 bits (116), Expect = 2e-06 Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHISPNSDQARIWQ-QLQHYAQFPDFNNYLV 366 WQP E+GL+++ +L+ SPN+ RI Q +L+ QFPDFNNYL+ Sbjct: 3 WQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLI 49
>TNPO2_MOUSE (Q99LG2) Transportin-2 (Karyopherin beta-2b)| Length = 887 Score = 49.3 bits (116), Expect = 2e-06 Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHISPNSDQARIWQ-QLQHYAQFPDFNNYLV 366 WQP E+GL+++ +L+ SPN+ RI Q +L+ QFPDFNNYL+ Sbjct: 3 WQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLI 49
>TNPO1_MOUSE (Q8BFY9) Transportin-1 (Importin beta-2) (Karyopherin beta-2)| Length = 890 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHISPNSD-QARIWQQLQHYAQFPDFNNYLV 366 W+P E+GL++I +L+ SP++ Q + Q+L+ Q+PDFNNYL+ Sbjct: 5 WKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLI 51
>TNPO1_HUMAN (Q92973) Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9| region interaction protein) (MIP) Length = 890 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHISPNSD-QARIWQQLQHYAQFPDFNNYLV 366 W+P E+GL++I +L+ SP++ Q + Q+L+ Q+PDFNNYL+ Sbjct: 5 WKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLI 51
>IMB2_YEAST (P38217) Importin beta-2 subunit (Karyopherin beta-2 subunit)| (Importin 104) (Transportin) (TRN) Length = 918 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHISPNSD-QARIWQQLQHYAQFPDFNNYL 363 W+P E+ + ++ +L+ +SPN + + + ++++ P+F NYL Sbjct: 5 WKPAEDYVLQLATLLQNCMSPNPEIRNNAMEAMENFQLQPEFLNYL 50
>NAS2_HORVU (Q9ZQV7) Probable nicotianamine synthase 2 (EC 2.5.1.43)| (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S- adenosyl-methionine 3-amino-3-carboxypropyltransferase 2) (HvNAS2) Length = 335 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +1 Query: 232 QPQEEGLREICAVLEAHISPN-SDQARIWQQ-LQHYAQFPDFNNYL 363 Q EGL +C+ E + + SD + + L H FP +NNY+ Sbjct: 62 QEMREGLIRLCSEAEGKLEAHYSDMLAAFDKPLDHLGMFPYYNNYI 107
>TCPB_MOUSE (P80314) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)| Length = 534 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHISPNSDQARIWQQLQHYA 336 W+ + RE A+L + + SD+AR WQ L + A Sbjct: 129 WREATKAARE--ALLSSAVDHGSDEARFWQDLMNIA 162
>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9| Length = 378 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +1 Query: 229 WQPQEEGLREICAVLEAHI--SPNSDQARIWQQLQHYAQFPDFN 354 W P+ E +R + A+ + + P + RI QLQ Y Q D N Sbjct: 56 WNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDAN 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,665,885 Number of Sequences: 219361 Number of extensions: 148642 Number of successful extensions: 505 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 498 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 501 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)