ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl11e04 |
|---|---|
| Clone Library Name | barley_pub |
>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to| Peronospora parasitica protein 13) Length = 835 Score = 38.1 bits (87), Expect = 0.005 Identities = 27/110 (24%), Positives = 51/110 (46%) Frame = +2 Query: 29 LERDINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHRVR 208 ++ D+ +K E I ++D + R +EV KEW ++V + A+ +ED +D + ++ Sbjct: 27 VKEDLEELKTELTCIHGYLKDVEARE--REDEVSKEWSKLVLDFAYDVEDVLDTYHLKLE 84 Query: 209 MAKTGAGWLRRAVHRVKTVKARNEFAMAIQELKKISKDASKLRGAYSYCG 358 G LRR +++ I+ LK+ D ++ R Y G Sbjct: 85 ERSQRRG-LRRLTNKIGRKMDAYSIVDDIRILKRRILDITRKRETYGIGG 133
>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3| Length = 847 Score = 37.7 bits (86), Expect = 0.007 Identities = 25/103 (24%), Positives = 49/103 (47%) Frame = +2 Query: 38 DINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHRVRMAK 217 D+ +K E I ++D + R +EV KEW ++V ++A+ IED +D + ++ Sbjct: 30 DLEELKTELTCIHGYLKDVEARE--REDEVSKEWTKLVLDIAYDIEDVLDTYFLKLEERS 87 Query: 218 TGAGWLRRAVHRVKTVKARNEFAMAIQELKKISKDASKLRGAY 346 G L R +++ + I+ LK+ D ++ R + Sbjct: 88 LRRG-LLRLTNKIGKKRDAYNIVEDIRTLKRRILDITRKRETF 129
>PCP_ERWCT (Q6D7H1) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 215 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -3 Query: 205 HSVHEAVDAVFNGVRHLTYHPDPLLMHLFTPSMATVLLILDDGRNHAKLILDEIDVTL 32 H +H+ D V G H+ Y P+ H PSM T L+ +L++ ++DV + Sbjct: 152 HQLHQQGDVVRGGFVHIPYSPEQAARHPGEPSMPTPLVTAALEVMIKQLLVQQVDVAI 209
>Y492_PASMU (Q9CNE0) Hypothetical protein PM0492| Length = 104 Score = 33.1 bits (74), Expect = 0.17 Identities = 15/61 (24%), Positives = 31/61 (50%) Frame = -3 Query: 184 DAVFNGVRHLTYHPDPLLMHLFTPSMATVLLILDDGRNHAKLILDEIDVTLQVLPKLVIF 5 D N +R + YH + + L+ ++ ++LL D+ N L+ + + L + P+ +F Sbjct: 45 DRTINSLRIIIYHGNKICFDLYKENLKSILL--DENGNFISFFLECMQIELSIYPEFSVF 102 Query: 4 I 2 I Sbjct: 103 I 103
>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2| Length = 847 Score = 32.7 bits (73), Expect = 0.22 Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 2/100 (2%) Frame = +2 Query: 38 DINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHRV--RM 211 D+ +K E I +++ + + +EV KEW ++V ++A+ +ED +D + ++ R+ Sbjct: 30 DLEELKTELTCIQVYLKNVEVC--DKEDEVSKEWTKLVLDIAYDVEDVLDTYFLKLEKRL 87 Query: 212 AKTGAGWLRRAVHRVKTVKARNEFAMAIQELKKISKDASK 331 + G L R + + K I+ LK+ + D ++ Sbjct: 88 HRLG---LMRLTNIISDKKDAYNILDDIKTLKRRTLDVTR 124
>RPOC_CLOPE (Q93R87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1178 Score = 32.0 bits (71), Expect = 0.37 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 5 KNHELRKNLERDINFIK--YEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIED 178 K +EL K + ++ I+ Y G+IS +DE R E V ++W EVA + + Sbjct: 645 KKYELLKEADETVDKIEKMYRRGLIS---EDE------RYERVIEKWTETTEEVADTLMN 695 Query: 179 CIDRFMHRVRMAKTGA 226 +D+F MA +GA Sbjct: 696 SLDKFNPIFMMADSGA 711
>TPP1_RAT (Q9EQV6) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) Length = 563 Score = 30.8 bits (68), Expect = 0.83 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -3 Query: 289 HGELVTGLHRLHPVDSPSEPPGPCLGHPHSVHEAV 185 H +LV GLHR P+ SP + P P P +H V Sbjct: 166 HVDLVAGLHRFPPLSSPRQRPEPQGVGPVGLHLGV 200
>INP5E_MOUSE (Q9JII1) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)| (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) Length = 647 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/59 (28%), Positives = 21/59 (35%) Frame = -3 Query: 364 PTATVGVCSSEXXXXXXXXXXXLDSHGELVTGLHRLHPVDSPSEPPGPCLGHPHSVHEA 188 P + + SS D + T L R H PS P P G HS+H A Sbjct: 199 PAMDLSIASSSLRTANKVDPEHTDYKLRMQTRLVRAHSNLGPSRPRSPLAGDDHSIHSA 257
>SNF6_YEAST (P18888) Transcription regulatory protein SNF6 (SWI/SNF complex| component SNF6) Length = 332 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 202 SVHEAVDAVFNGVRHLTYHPDPLLMHLFTPSM 107 S + +DAVF HL Y PD +++H P++ Sbjct: 182 STKDMIDAVFEQDSHLRYQPDGVVVHRDDPAL 213
>RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabaptin-5)| (Rabaptin-5alpha) Length = 862 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Frame = +2 Query: 59 EFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHR--VRMAKTGAGW 232 E I A+ +N++ +EV ++W V + +++ + + H+ +R+ + A W Sbjct: 84 EMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQW 143 Query: 233 LR---RAVHRVKTVKAR----NEFAMAIQELKKISKDASKLR 337 + A + ++ R E E+KK +DA KLR Sbjct: 144 AQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDAEKLR 185
>RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Rabaptin-5)| (Rabaptin-5alpha) Length = 862 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Frame = +2 Query: 59 EFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHR--VRMAKTGAGW 232 E I A+ +N++ +EV ++W V + +++ + + H+ +R+ + A W Sbjct: 84 EMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAIMKETVRDYEHQFHLRLEQERAQW 143 Query: 233 LR---RAVHRVKTVKAR----NEFAMAIQELKKISKDASKLR 337 + A + ++ R E E+KK +DA KLR Sbjct: 144 AQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLR 185
>SMUG1_BOVIN (Q59I47) Single-strand selective monofunctional uracil DNA| glycosylase (EC 3.2.2.-) Length = 272 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = -3 Query: 253 PVDSPSE--PPGPCLGHPHSVHEAVDAVFNGV-RHLTYHPDPLLMHLFTPSMATVLLILD 83 PV +P + P P LG E A F G R+L P+ H F ++ +LL+ Sbjct: 115 PVRTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFRHCFVHNLCPLLLLAP 174 Query: 82 DGRN 71 GRN Sbjct: 175 SGRN 178
>QUEA_PROMA (Q7VDH4) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 370 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +2 Query: 125 VHKEWIRMVREVAHAIEDCIDR 190 +H EW+ + EV AI++C DR Sbjct: 242 LHSEWVEVKEEVVSAIKECRDR 263
>LSTP_STAST (P10548) Lysostaphin precursor (EC 3.4.24.75) (Glycyl-glycine| endopeptidase) Length = 480 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +3 Query: 114 GVKRCIRSGSGWYVRWRTPLKTASTASCTE*GWPRQGPGGSDGL 245 G+ I G +++ TP+K S+ E GW G G GL Sbjct: 260 GINGGIHYGVDFFMNIGTPVKAISSGKIVEAGWSNYGGGNQIGL 303
>CH60_RALSO (Q8Y1P8) 60 kDa chaperonin (Protein Cpn60) (groEL protein)| Length = 547 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +2 Query: 221 GAGWLRRAVHRVKTVKARNEFAMAIQELKKISKDASKLRGAYSYCGSGSTT 373 GAG R RVK V+A+ E A + + +K+ + +KL G + G+ T Sbjct: 335 GAGDARNIEARVKQVRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAAT 385
>RPOC_CLOAB (Q97EH0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1182 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 113 RGEEVHKEWIRMVREVAHAIEDCIDRFMHRVRMAKTGA 226 R E V W + +VA A+ D +DRF MA +GA Sbjct: 673 RYERVISTWTKTTEKVADALMDNLDRFNPIFMMADSGA 710
>SPI1_HUMAN (P17947) Transcription factor PU.1 (31 kDa transforming protein)| Length = 270 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -3 Query: 268 LHRLHPVDSPSEPPGPCLGH 209 L ++H +D+P PP P LGH Sbjct: 90 LEQMHVLDTPMVPPHPSLGH 109
>Y1262_METJA (Q58658) Hypothetical protein MJ1262| Length = 389 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +2 Query: 41 INFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHA--IEDCIDRFM 196 I+F Y G +S + HGRGE+V K + ++ H IED I R+M Sbjct: 83 ISFSFYGVGAVSFI--------HGRGEKVKKAKEEYIFDITHPLDIEDRIRRYM 128
>INP5E_RAT (Q9WVR1) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)| (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) (5-phosphatase that induces arborization) (Pharbin) Length = 647 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/59 (27%), Positives = 20/59 (33%) Frame = -3 Query: 364 PTATVGVCSSEXXXXXXXXXXXLDSHGELVTGLHRLHPVDSPSEPPGPCLGHPHSVHEA 188 P + + SS D + L R H PS P P G HS+H A Sbjct: 198 PAMDLNIASSSLRTANKVDPEHTDYKLRMQNRLVRAHSNLGPSRPRSPLAGDDHSIHSA 256
>T2S1_STRAH (O31074) Type II restriction enzyme SacI (EC 3.1.21.4)| (Endonuclease SacI) (R.SacI) Length = 358 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -1 Query: 324 ASFDIFLSSWIAMANSLRAFTVFTRWTARRSHPAPVLAILTR 199 AS D+FL WI +A SLR +TA A V A+L R Sbjct: 22 ASDDVFLEDWIFLATSLREVDAPRTYTA-----ALVTALLAR 58
>R1A6_SOLDE (Q6L438) Putative late blight resistance protein homolog R1A-6| Length = 1247 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/104 (16%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Frame = +2 Query: 29 LERDINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHRVR 208 L+ + I+ EF + ++ H + + ++++ + A+ +E +D +++ Sbjct: 413 LKNQLQVIQTEFESLQPFLKVVAEEPHNKLKTLNEDCATQIIRKAYEVEYVVDACINKEA 472 Query: 209 MAKTGAGWLRRAVHRVKTVKARNEFAMAIQELKK--ISKDASKL 334 + WL + + +KA+ + +++ K I++ +SKL Sbjct: 473 LHWCLERWLLDIIEEITCIKAKIQEKNTVEDTMKTVIARTSSKL 516
>SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2| Length = 2061 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -3 Query: 256 HPVDSPSEPPGPCLGHPHSVHEAVD 182 HP P EPP P + PH H + D Sbjct: 1938 HPHPHPREPPPPPIRQPHLHHHSSD 1962
>SIF1_DROME (P91621) Protein still life, isoform SIF type 1| Length = 2072 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -3 Query: 256 HPVDSPSEPPGPCLGHPHSVHEAVD 182 HP P EPP P + PH H + D Sbjct: 1949 HPHPHPREPPPPPIRQPHLHHHSSD 1973
>RECR_METCA (Q609A9) Recombination protein recR| Length = 198 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -1 Query: 207 LTRCMKRSMQSSMACATSRTILIHSLCTSSPLPWR---LFCSSWMTAEIM 67 L+ ++++++ CA RT+ HSLC P R L C AE++ Sbjct: 43 LSEALRQALEKVGLCAQCRTLTEHSLCEYCASPGRDRSLLCIVESPAEVL 92
>ROR1_MOUSE (Q9Z139) Tyrosine-protein kinase transmembrane receptor ROR1| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 1) (mROR1) Length = 937 Score = 27.7 bits (60), Expect = 7.0 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +1 Query: 67 HDFCRHPG*AKQSPW 111 H +CR+PG K++PW Sbjct: 359 HSYCRNPGNQKEAPW 373
>ROR1_HUMAN (Q01973) Tyrosine-protein kinase transmembrane receptor ROR1| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 1) Length = 937 Score = 27.7 bits (60), Expect = 7.0 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +1 Query: 67 HDFCRHPG*AKQSPW 111 H +CR+PG K++PW Sbjct: 359 HSYCRNPGNQKEAPW 373
>RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Rabaptin-5)| (Rabaptin-5alpha) (Rabaptin-4) (NY-REN-17 antigen) Length = 862 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Frame = +2 Query: 59 EFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHR--VRMAKTGAGW 232 E I A+ +N++ +EV ++W V + +++ + + H+ +R+ + W Sbjct: 84 EMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQW 143 Query: 233 LRR---AVHRVKTVKAR----NEFAMAIQELKKISKDASKLR 337 + A + ++ R E E+KK +DA KLR Sbjct: 144 AQYREYAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLR 185
>PIST_ARATH (P48007) Floral homeotic protein PISTILLATA (Transcription factor| PI) Length = 208 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = +2 Query: 2 DKNHELRKNLERDINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDC 181 D HE NL +I+ IK E + + RH +GE++ ++ + V HAIE Sbjct: 81 DAKHE---NLSNEIDRIKKENDSLQLEL------RHLKGEDIQSLNLKNLMAVEHAIEHG 131 Query: 182 IDR 190 +D+ Sbjct: 132 LDK 134
>LSTP_STASI (P10547) Lysostaphin precursor (EC 3.4.24.75) (Glycyl-glycine| endopeptidase) Length = 493 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +3 Query: 114 GVKRCIRSGSGWYVRWRTPLKTASTASCTE*GWPRQGPGGSDGL 245 G+ + G +++ TP+K S+ E GW G G GL Sbjct: 273 GINGGMHYGVDFFMNIGTPVKAISSGKIVEAGWSNYGGGNQIGL 316
>R1A10_SOLDE (Q60CZ8) Putative late blight resistance protein homolog R1A-10| Length = 1306 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/104 (16%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Frame = +2 Query: 29 LERDINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDCIDRFMHRVR 208 L+ + I+ EF + ++ H + + ++++ + A+ +E +D +++ Sbjct: 413 LKNQLQVIQTEFESLQPFLKVVAEEPHNKLKTLNEDCATQIIRKAYEVEYVVDACINKEA 472 Query: 209 MAKTGAGWLRRAVHRVKTVKARNEFAMAIQELKK--ISKDASKL 334 + WL + + +KA+ + +++ K I++ +SKL Sbjct: 473 LHWCLERWLLDIIEEITCIKAKIQEKNTVEDTMKTVIARTSSKL 516
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = -1 Query: 345 YAPLSLDAS--FDIFLSSWIAMANSLRAFTVFTRWTARRSHPAPVLAILTRCMKRSMQSS 172 Y L +D+ F+ +L+ + + N F + TR HP VLA + + Q + Sbjct: 547 YQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVLASKRKTVDIENQEN 606 Query: 171 MAC 163 + C Sbjct: 607 IVC 609
>QUEA_PSEPK (Q88PL8) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 349 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +2 Query: 23 KNLERDINFIKYEFGMISAVIQDEQNSRHGRGEEVHKEWIRMVREVAHAIEDC 181 K +ER + G V D+ H +HKEW+ + ++V AIE C Sbjct: 192 KGVERAFVTLHVGAGTFQPVRVDKIEDHH-----MHKEWLEVGQDVVDAIEAC 239
>SSI2_STRLO (P35706) Trypsin inhibitor STI2 precursor| Length = 144 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -1 Query: 342 APLSLDASFDIFLS----SWIAMANSLRAFTVFTRWTARRSHPAPVLA 211 AP SL A + L+ + A A+ LRA T+ TA +HPAP LA Sbjct: 33 APASLYAPSALVLTVGHGTSAAAASPLRAVTLNCAPTASGTHPAPALA 80
>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2330 Score = 27.3 bits (59), Expect = 9.2 Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Frame = -3 Query: 232 PPGPCLGHPHSVHEAVDA--VFNGVR-HLTY-HPDPLLMHLFTPSMATVLLILDDGRN-- 71 PP GH HEA D+ VF G R H+ P P L L P LL G Sbjct: 1209 PPTGLYGHSAVYHEATDSLYVFGGFRFHVELAAPSPELYSLHCPDRTWSLLAPSQGAKPR 1268 Query: 70 ----HAKLILDEIDVTL 32 HA +L + V L Sbjct: 1269 PRLFHASALLGDTMVVL 1285
>AG45_MYCLE (P46838) 46 kDa membrane protein| Length = 429 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -1 Query: 330 LDASFDIFLSSWIAMANSLRAFTVFTR---WTARRSHPAPVLAILTRCMKRSMQSSMACA 160 +D L S + + + LR VF WTA+RSH +P+ +L + ++ S++ Sbjct: 53 IDWEVIFLLLSMMIIVSVLRQTGVFEYVAIWTAKRSHGSPLRILLLLVLVMALGSALLDN 112 Query: 159 TSRTILI 139 + +LI Sbjct: 113 VTTVLLI 119
>MTHR_ORYSA (Q75HE6) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 594 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +2 Query: 83 IQDEQNSR-HGRGEEVHKEWIRMVREVAHAIEDCIDRFMHRVRMAKTGAGW 232 + D Q +R GRG+++ +EW V+ ++ED +RFM+ + T + W Sbjct: 365 LTDYQFTRPRGRGKKLQEEWAVPVK----SVEDINERFMNFCQGKLTSSPW 411
>ADA11_MOUSE (Q9R1V4) ADAM 11 precursor (A disintegrin and metalloproteinase| domain 11) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein) (MDC) Length = 773 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 224 PLSWPSSLGA*SGRCSLQWRAPPHVPS*STP 132 PL P LGA R +L WR+ HV S +P Sbjct: 16 PLLPPPGLGALGPRGALHWRSSAHVGSPESP 46
>RGL2_CANFA (Q5TJE5) Ral guanine nucleotide dissociation stimulator-like 2| (RAS-associated protein RAB2L) Length = 780 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 7/74 (9%) Frame = -1 Query: 312 IFLSSWIAMANSLRAFTVFTRWTARR-------SHPAPVLAILTRCMKRSMQSSMACATS 154 + +S W + S+ T W PAP+L L + MK SS+ A Sbjct: 531 LVVSQWTEVLGSVGGPTPLVSWDRPSVGGEEVPGTPAPLLTRLAQHMKWPSVSSLDSALE 590 Query: 153 RTILIHSLCTSSPL 112 T +HSL S L Sbjct: 591 STPYLHSLADPSHL 604
>EI2B2_PYRFU (Q8U4G6) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 324 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = +2 Query: 140 IRMVREVAHAIEDCIDRFMHRVRMAKTGAGWLRRAVHRVKTVKARNEFAMAIQELKKISK 319 +R V E+A I++ M GAG + RAV ++A A EL K K Sbjct: 6 VREVFEIAEKIKN----------MEIRGAGEIARAVAEALKIQAEKSKAKTSHELWKELK 55 Query: 320 DASKL 334 +ASK+ Sbjct: 56 EASKI 60
>TIM13_USTMA (Q4PGT2) Mitochondrial import inner membrane translocase subunit| TIM13 Length = 108 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%) Frame = -1 Query: 306 LSSWIAMANSLRAFTVFTRWTARRSHPAPVLAI-------LTRCMKRSMQS-SMACATSR 151 +SS +AMAN+ + T T + PAP ++ LTRCM+R ++ ++ +T Sbjct: 29 VSSELAMANAQQLITKATEKCYSKCIPAPGASLSGKEQTCLTRCMERYFEAFNIVSSTPY 88 Query: 150 TILIHSL 130 + H++ Sbjct: 89 VVEYHTI 95
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 259 LHPVDSPSEPPGPCLGHPHSVH 194 +HP P P GP +GHPH H Sbjct: 158 MHPHMHPHHPGGP-MGHPHGPH 178
>HIS3_METAC (Q8TS96) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)| Length = 120 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/21 (47%), Positives = 18/21 (85%) Frame = +2 Query: 38 DINFIKYEFGMISAVIQDEQN 100 D++ +KYE G+I AV+QD+++ Sbjct: 3 DLDTLKYENGLILAVVQDQKS 23 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,440,328 Number of Sequences: 219361 Number of extensions: 1270256 Number of successful extensions: 4132 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 4004 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4131 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
