Clone Name | bastl11e03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDde... | 30 | 0.008 | 2 | PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLD... | 28 | 4.2 | 3 | PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLD... | 28 | 7.2 |
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>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD| delta) Length = 868 Score = 30.4 bits (67), Expect(2) = 0.008 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 Query: 305 HMDMFSEHIRRCFASC 352 +MDMFSEH+RR F +C Sbjct: 28 NMDMFSEHLRRLFTAC 43 Score = 26.2 bits (56), Expect(2) = 0.008 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3 Query: 252 VLLHGDLDLWVLEARLL 302 +LLHGDLDL +++AR L Sbjct: 10 MLLHGDLDLKIVKARRL 26
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 225 DESPSPPKPVLLHGDLDLWVLEARLL 302 D S + LLHG+LD+WV EA+ L Sbjct: 33 DTSSGSLRVELLHGNLDIWVKEAKHL 58
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 Query: 255 LLHGDLDLWVLEARLL 302 LLHG+LD+WV EA+ L Sbjct: 39 LLHGNLDIWVKEAKHL 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,559,991 Number of Sequences: 219361 Number of extensions: 153791 Number of successful extensions: 597 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 591 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 597 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)