ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl11e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 260 bits (131), Expect = 3e-66 Identities = 230/263 (87%) Strand = Plus / Plus Query: 121 agatgtccgggaggaagggcggcaagaagaagaaggcggtgagccggtccgcgaaggccg 180 ||||| |||| |||||||||||| ||| |||||||||||||| ||| |||| |||||||| Sbjct: 82 agatggccggaaggaagggcggcgagaggaagaaggcggtgacccgctccgtgaaggccg 141 Query: 181 ggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctacgcgcagc 240 |||| || ||||||||||||||||||| || | |||||| || ||| ||||||||||| Sbjct: 142 ggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcgcagg 201 Query: 241 gagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccgtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 261 Query: 301 tcctggagctggtcggcaatgcgaccaagggacacaagaagagccgcgtcgtgtcgcggc 360 |||||||||| | |||||| ||| |||||| ||||||||| ||| || | |||| | Sbjct: 262 tcctggagctcgccggcaacgcggccaaggacaacaagaagacgcgcatcatcccgcgcc 321 Query: 361 acctgctgctggccgtccgcaac 383 ||||||||||||||||||||||| Sbjct: 322 acctgctgctggccgtccgcaac 344
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 252 bits (127), Expect = 7e-64 Identities = 229/263 (87%) Strand = Plus / Plus Query: 121 agatgtccgggaggaagggcggcaagaagaagaaggcggtgagccggtccgcgaaggccg 180 ||||| |||| |||||||||||| | | |||||||||||||| ||| |||| ||||||| Sbjct: 84 agatggccggaaggaagggcggcgacaggaagaaggcggtgacccgctccgtcaaggccg 143 Query: 181 ggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctacgcgcagc 240 |||| || ||||||||||||||||||| || | |||||| || ||| ||||||| |||| Sbjct: 144 ggctgcagttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccagc 203 Query: 241 gagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 300 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 gcgtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 263 Query: 301 tcctggagctggtcggcaatgcgaccaagggacacaagaagagccgcgtcgtgtcgcggc 360 |||||||||| | |||||| ||| |||||| ||||||||| ||| || | |||| | Sbjct: 264 tcctggagcttgccggcaacgcggccaaggacaacaagaagacgcgcatcatcccgcgcc 323 Query: 361 acctgctgctggccgtccgcaac 383 ||||||||||||||||||||||| Sbjct: 324 acctgctgctggccgtccgcaac 346
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 244 bits (123), Expect = 2e-61 Identities = 228/263 (86%) Strand = Plus / Plus Query: 121 agatgtccgggaggaagggcggcaagaagaagaaggcggtgagccggtccgcgaaggccg 180 ||||| |||| |||||||||||| | | |||||||||||||| ||| |||| |||||||| Sbjct: 61 agatggccggaaggaagggcggcgacaggaagaaggcggtgacccgctccgtgaaggccg 120 Query: 181 ggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctacgcgcagc 240 |||| || ||||||||||||||||||| || | |||||| || ||| ||||||| |||| Sbjct: 121 ggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccagc 180 Query: 241 gagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 300 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcgtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 240 Query: 301 tcctggagctggtcggcaatgcgaccaagggacacaagaagagccgcgtcgtgtcgcggc 360 | |||||||| | |||||| ||| |||||| ||||||||| |||| || | |||| | Sbjct: 241 tgctggagcttgccggcaacgcggccaaggacaacaagaagacccgcatcatcccgcgcc 300 Query: 361 acctgctgctggccgtccgcaac 383 |||||||||| || ||||||||| Sbjct: 301 acctgctgctcgctgtccgcaac 323
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 200 bits (101), Expect = 2e-48 Identities = 161/181 (88%) Strand = Plus / Plus Query: 121 agatgtccgggaggaagggcggcaagaagaagaaggcggtgagccggtccgcgaaggccg 180 ||||| |||| |||||||||||| | | |||||||||||||| | |||||| |||||||| Sbjct: 1788 agatggccggaaggaagggcggcgacaggaagaaggcggtgaccaggtccgtgaaggccg 1847 Query: 181 ggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctacgcgcagc 240 |||| || ||||||||||||||||||| || | |||||| || ||| ||||||| |||| Sbjct: 1848 ggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccagc 1907 Query: 241 gagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1908 gcatcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 1967 Query: 301 t 301 | Sbjct: 1968 t 1968 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 334 acaagaagagccgcgtcgtgtcgcggcacctgctgctggccgtccgcaac 383 ||||||||| |||| || | |||| ||||||||||| |||||||||||| Sbjct: 2096 acaagaagacccgcatcatcccgcgccacctgctgctcgccgtccgcaac 2145
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 200 bits (101), Expect = 2e-48 Identities = 161/181 (88%) Strand = Plus / Plus Query: 121 agatgtccgggaggaagggcggcaagaagaagaaggcggtgagccggtccgcgaaggccg 180 ||||| |||| |||||||||||| | | |||||||||||||| | |||||| |||||||| Sbjct: 1788 agatggccggaaggaagggcggcgacaggaagaaggcggtgaccaggtccgtgaaggccg 1847 Query: 181 ggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctacgcgcagc 240 |||| || ||||||||||||||||||| || | |||||| || ||| ||||||| |||| Sbjct: 1848 ggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccagc 1907 Query: 241 gagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1908 gcatcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 1967 Query: 301 t 301 | Sbjct: 1968 t 1968 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 334 acaagaagagccgcgtcgtgtcgcggcacctgctgctggccgtccgcaac 383 ||||||||| |||| || | |||| ||||||||||| |||||||||||| Sbjct: 2096 acaagaagacccgcatcatcccgcgccacctgctgctcgccgtccgcaac 2145
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 165 bits (83), Expect = 1e-37 Identities = 197/235 (83%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||| |||||| |||||| |||||||||||| || ||||||||||||||||||| Sbjct: 125 gaagaagtcggtgacgaggtccgtgaaggccgggctccagttccccgtcggccgcatcgg 184 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||||||||| |||||| ||| |||||||||||||| Sbjct: 185 gcgctacctcaagaagggccgctacgcgcagcgcgtcggcagcggtgcccccgtctacct 244 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaa 328 ||| |||||||| |||||||||||||| |||||||||||||| | |||||| || |||| Sbjct: 245 cgcggccgtcctggagtacctcgccgctgaggtcctggagctcgccggcaacgctgccaa 304 Query: 329 gggacacaagaagagccgcgtcgtgtcgcggcacctgctgctggccgtccgcaac 383 || ||||||||| ||| |||| |||| ||| |||||||||| |||||||| Sbjct: 305 ggacaacaagaagacgcgcatcgtcccgcgccacgtgctgctggcgatccgcaac 359
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 163 bits (82), Expect = 5e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 75 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 134 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 135 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 194 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 195 cgccgccgtcctcgagtacctcgccgccgaggtgctggagct 236
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| || ||| ||||| Sbjct: 168 aaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgctac 227 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 gcccagcgcgtcggcaccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 287 Query: 294 gccgaggtcctggagct 310 || ||||| |||||||| Sbjct: 288 gcagaggtgctggagct 304
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 5e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 17416714 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 17416773 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 17416774 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 17416833 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggt 301 ||||||||||||||||||||||||||||||||| Sbjct: 17416834 cgccgccgtcctcgagtacctcgccgccgaggt 17416866 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccccgtctacctcgccgccg 276 |||||||||||||||||||| Sbjct: 31905196 ccccgtctacctcgccgccg 31905177 Score = 40.1 bits (20), Expect = 5.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 24 gcaggagaagaaccgggtcgcggtcatcgcgctaaacgcagagatccg 71 ||||||||||||||| | | |||| ||||||| ||||| |||||||| Sbjct: 28239027 gcaggagaagaaccgcgccacggtggtcgcgctgaacgcggagatccg 28238980
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 153 bits (77), Expect = 5e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 70106 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 70165 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 70166 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 70225 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggt 301 ||||||||||||||||||||||||||||||||| Sbjct: 70226 cgccgccgtcctcgagtacctcgccgccgaggt 70258
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 149 bits (75), Expect = 8e-33 Identities = 114/127 (89%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| || ||| ||||| Sbjct: 91 aaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgctac 150 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 gcccagcgcgtcggcaccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 210 Query: 294 gccgagg 300 || |||| Sbjct: 211 gcagagg 217
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 149 bits (75), Expect = 8e-33 Identities = 147/171 (85%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||| |||||| |||||| ||||||||||| || || |||||||||||||||| Sbjct: 168 gaagaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgg 227 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 |||| ||| || || ||| | ||||||||||| |||||| | ||||||||||||||||| Sbjct: 228 gcggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 287 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaa 319 |||||||||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 288 ggccgccgtcctcgagtacctggccgccgaggtgctggagctggccggcaa 338
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 8e-33 Identities = 114/127 (89%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| || ||| ||||| Sbjct: 707026 aaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgctac 707085 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707086 gcccagcgcgtcggcaccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 707145 Query: 294 gccgagg 300 || |||| Sbjct: 707146 gcagagg 707152 Score = 143 bits (72), Expect = 5e-31 Identities = 135/156 (86%) Strand = Plus / Minus Query: 146 gaagaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcat 205 |||||||||| ||||| ||| |||| ||||||||||| || |||||||||||||| || Sbjct: 22512730 gaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgtcggccgtat 22512671 Query: 206 cgatcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtcta 265 || || | |||||| ||||| ||||| | ||||| ||||| |||||||||||||||| Sbjct: 22512670 cggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgcccccgtcta 22512611 Query: 266 cctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||||||||||||||||||||||| Sbjct: 22512610 cctcgccgccgtcctcgagtacctcgccgccgaggt 22512575 Score = 40.1 bits (20), Expect = 5.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 24 gcaggagaagaaccgggtcgcggtcatcgcgctaaacgcagagatccg 71 ||||||||||||||| | | |||| ||||||| ||||| |||||||| Sbjct: 27310348 gcaggagaagaaccgcgccacggtggtcgcgctcaacgcggagatccg 27310395
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 149 bits (75), Expect = 8e-33 Identities = 147/171 (85%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||| |||||| |||||| ||||||||||| || || |||||||||||||||| Sbjct: 168 gaagaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgg 227 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 |||| ||| || || ||| | ||||||||||| |||||| | ||||||||||||||||| Sbjct: 228 gcggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 287 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaa 319 |||||||||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 288 ggccgccgtcctcgagtacctggccgccgaggtgctggagctggccggcaa 338
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 149 bits (75), Expect = 8e-33 Identities = 114/127 (89%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| || ||| ||||| Sbjct: 52225 aaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgctac 52284 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52285 gcccagcgcgtcggcaccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 52344 Query: 294 gccgagg 300 || |||| Sbjct: 52345 gcagagg 52351
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 147 bits (74), Expect = 3e-32 Identities = 140/162 (86%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 165 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 224 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 225 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 284 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 285 cgccgccgtcctcgagtacctcgctgccgaggtgctggagct 326
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 145 bits (73), Expect = 1e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 146 gaagaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcat 205 |||||||||| ||||| ||| |||| ||||||||||| || |||||||||||||| || Sbjct: 66 gaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgtcggccgtat 125 Query: 206 cgatcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtcta 265 || || | |||||| ||||| ||||| | ||||| ||||| |||||||||||||||| Sbjct: 126 cggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgcccccgtcta 185 Query: 266 cctcgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 186 cctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagct 230
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 145 bits (73), Expect = 1e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 146 gaagaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcat 205 |||||||||| ||||| ||| |||| ||||||||||| || |||||||||||||| || Sbjct: 137 gaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgtcggccgtat 196 Query: 206 cgatcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtcta 265 || || | |||||| ||||| ||||| | ||||| ||||| |||||||||||||||| Sbjct: 197 cggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgcccccgtcta 256 Query: 266 cctcgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 257 cctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagct 301
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 143 bits (72), Expect = 5e-31 Identities = 135/156 (86%) Strand = Plus / Minus Query: 146 gaagaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcat 205 |||||||||| ||||| ||| |||| ||||||||||| || |||||||||||||| || Sbjct: 7780 gaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgtcggccgtat 7721 Query: 206 cgatcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtcta 265 || || | |||||| ||||| ||||| | ||||| ||||| |||||||||||||||| Sbjct: 7720 cggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgcccccgtcta 7661 Query: 266 cctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||||||||||||||||||||||| Sbjct: 7660 cctcgccgccgtcctcgagtacctcgccgccgaggt 7625
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 143 bits (72), Expect = 5e-31 Identities = 135/156 (86%) Strand = Plus / Minus Query: 146 gaagaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcat 205 |||||||||| ||||| ||| |||| ||||||||||| || |||||||||||||| || Sbjct: 102137 gaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgtcggccgtat 102078 Query: 206 cgatcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtcta 265 || || | |||||| ||||| ||||| | ||||| ||||| |||||||||||||||| Sbjct: 102077 cggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgcccccgtcta 102018 Query: 266 cctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||||||||||||||||||||||| Sbjct: 102017 cctcgccgccgtcctcgagtacctcgccgccgaggt 101982
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 143 bits (72), Expect = 5e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||| |||||| ||||||| ||||||||||| || |||||||||||||| |||| Sbjct: 286 gaagaagtcggtgacgcggtccgtcaaggccgggctgcagttccccgtcggccggatcgg 345 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| | ||||||||||| || ||| | ||||||||||||||||| Sbjct: 346 gcgctacctcaagaagggccggtacgcgcagcgcgtgggcactggcgcccccgtctacct 405 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggag 308 |||||||||||| |||||||||||||||||||| |||||| Sbjct: 406 cgccgccgtcctggagtacctcgccgccgaggttctggag 445
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 3e-29 Identities = 132/153 (86%) Strand = Plus / Minus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 9471648 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 9471589 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 9471588 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 9471529 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||||||||||| |||||||| Sbjct: 9471528 cgccgccgtcctcgagtacctcgctgccgaggt 9471496 Score = 119 bits (60), Expect = 7e-24 Identities = 111/128 (86%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| ||| ||| Sbjct: 28997940 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 28997999 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 ||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 28998000 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 28998059 Query: 294 gccgaggt 301 |||||||| Sbjct: 28998060 gccgaggt 28998067 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 279 ctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaagg 330 ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 3353514 ctcgagtacctaaccgccgaggtcctggagctggccggcaacgcgagcaagg 3353565 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcg 207 |||||||||||||| || |||| ||||||||||| ||||||||||||||||| |||| Sbjct: 2463947 gaagaaggcggtgacgcgctccgtcaaggccgggctccaattccccgtcggccgtatcg 2464005
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 137 bits (69), Expect = 3e-29 Identities = 132/153 (86%) Strand = Plus / Minus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 169048 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 168989 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 168988 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 168929 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||||||||||| |||||||| Sbjct: 168928 cgccgccgtcctcgagtacctcgctgccgaggt 168896
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 3e-29 Identities = 132/153 (86%) Strand = Plus / Minus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 9469769 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 9469710 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| ||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 9469709 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 9469650 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||||||||||| |||||||| Sbjct: 9469649 cgccgccgtcctcgagtacctcgctgccgaggt 9469617 Score = 119 bits (60), Expect = 7e-24 Identities = 111/128 (86%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| ||| ||| Sbjct: 29089362 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 29089421 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 ||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 29089422 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 29089481 Query: 294 gccgaggt 301 |||||||| Sbjct: 29089482 gccgaggt 29089489 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 279 ctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaagg 330 ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 3353625 ctcgagtacctaaccgccgaggtcctggagctggccggcaacgcgagcaagg 3353676 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcg 207 |||||||||||||| || |||| ||||||||||| ||||||||||||||||| |||| Sbjct: 2464057 gaagaaggcggtgacgcgctccgtcaaggccgggctccaattccccgtcggccgtatcg 2464115
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || |||||||||||||| |||| || | |||||| ||||| ||||| Sbjct: 164 aaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgctac 223 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tcccagcgcatcggcaccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 283 Query: 294 gccgaggtcctggagct 310 |||||||| || ||||| Sbjct: 284 gccgaggtgctcgagct 300
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full insert sequence Length = 724 Score = 137 bits (69), Expect = 3e-29 Identities = 123/141 (87%) Strand = Plus / Plus Query: 172 cgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgct 231 ||||||||||||| || ||||||||||||||||||| || | |||||| ||| | Sbjct: 175 cgaaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagt 234 Query: 232 acgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcg 291 ||||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 235 acgcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcg 294 Query: 292 ccgccgaggtcctggagctgg 312 |||||||||| |||||||||| Sbjct: 295 ccgccgaggtgctggagctgg 315
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 135 bits (68), Expect = 1e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcga 208 ||||||| |||||| ||||||| ||||||||||| || |||||||||||||| |||| Sbjct: 137 gaagaagtcggtgacgcggtccgtcaaggccgggctgcagttccccgtcggccggatcgg 196 Query: 209 tcggttcctcaacaaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacct 268 || | |||||| || ||| | ||||||||||| || ||| | ||||||||||||||||| Sbjct: 197 gcgctacctcaagaagggccggtacgcgcagcgcgtgggcactggcgcccccgtctacct 256 Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggag 308 ||||||||| || |||||||||||||||||||| |||||| Sbjct: 257 cgccgccgttctggagtacctcgccgccgaggttctggag 296
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 123 bits (62), Expect = 4e-25 Identities = 124/145 (85%) Strand = Plus / Plus Query: 166 ggtccgcgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaag 225 |||||| ||||||||| || || ||||||||||||||||||| || | | | || || | Sbjct: 160 ggtccgtgaaggccggtctccagttccccgtcggccgcatcgggcgctacttgaagaagg 219 Query: 226 gctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagt 285 || ||||||||||| |||||| ||||||||||||||||||||||||| |||||||| | Sbjct: 220 gccgctacgcgcagnyygtcggcaccggcgcccccgtctacctcgccgctgtcctcgaat 279 Query: 286 acctcgccgccgaggtcctggagct 310 |||||||||| ||||| |||||||| Sbjct: 280 acctcgccgctgaggttctggagct 304
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 119 bits (60), Expect = 7e-24 Identities = 111/128 (86%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| ||| ||| Sbjct: 38081 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 38140 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 ||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 38141 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 38200 Query: 294 gccgaggt 301 |||||||| Sbjct: 38201 gccgaggt 38208
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 119 bits (60), Expect = 7e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| ||| ||| Sbjct: 141351 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 141292 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 ||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141291 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 141232 Query: 294 gccgaggt 301 |||||||| Sbjct: 141231 gccgaggt 141224
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 119 bits (60), Expect = 7e-24 Identities = 111/128 (86%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || ||||||||||||||||||| || | |||||| ||| ||| Sbjct: 181235 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 181294 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 ||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 181295 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 181354 Query: 294 gccgaggt 301 |||||||| Sbjct: 181355 gccgaggt 181362
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 117 bits (59), Expect = 3e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 |||||||| || || ||||||||||||||||||| ||| |||||| ||| ||| Sbjct: 180 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaaggccggcaagtac 239 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 240 gccgagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 299 Query: 294 gccgaggtcctggagctgg 312 |||||||| |||||||||| Sbjct: 300 gccgaggtgctggagctgg 318
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 115 bits (58), Expect = 1e-22 Identities = 122/145 (84%) Strand = Plus / Plus Query: 166 ggtccgcgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaag 225 |||||| |||||||||||| || ||||||||||||||||||| || | | | || || | Sbjct: 179 ggtccgtgaaggccgggctccagttccccgtcggccgcatcgggcgctacttgaagaagg 238 Query: 226 gctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagt 285 || ||||||||||||| |||||| |||||| |||||||||||||| |||||||| | Sbjct: 239 gccgctacgcgcagcgtgtcggcaccggcgnnnnngtctacctcgccgctgtcctcgaat 298 Query: 286 acctcgccgccgaggtcctggagct 310 |||||||||| ||||| |||||||| Sbjct: 299 acctcgccgctgaggttctggagct 323
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 113 bits (57), Expect = 4e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 agcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 187 Query: 298 aggtcctggagct 310 |||| || ||||| Sbjct: 188 aggttcttgagct 200
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 113 bits (57), Expect = 4e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 243 agcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgccgccg 302 Query: 298 aggtcctggagct 310 |||| |||||||| Sbjct: 303 aggtgctggagct 315
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full insert sequence Length = 733 Score = 113 bits (57), Expect = 4e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 242 agcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgccgccg 301 Query: 298 aggtcctggagct 310 |||| |||||||| Sbjct: 302 aggtgctggagct 314
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20566187 agcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 20566246 Query: 298 aggt 301 |||| Sbjct: 20566247 aggt 20566250 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 232 acgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcg 291 ||||||| || |||||| | ||| |||||||||||||||| |||||||||| |||||| | Sbjct: 11503480 acgcgcaacgcgtcggcactggcacccccgtctacctcgctgccgtcctcgggtaccttg 11503421 Query: 292 ccgccgagg 300 |||| |||| Sbjct: 11503420 ccgcagagg 11503412 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ggcggcaagaagaagaaggcggtg 161 ||||||||||||||||||| |||| Sbjct: 1538565 ggcggcaagaagaagaaggtggtg 1538542
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70148 agcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 70207 Query: 298 aggt 301 |||| Sbjct: 70208 aggt 70211
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40559 agcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 40618 Query: 298 aggt 301 |||| Sbjct: 40619 aggt 40622
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 109 bits (55), Expect = 7e-21 Identities = 118/139 (84%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| | |||||||| |||||||||| |||| ||| || ||||| | ||| Sbjct: 150 aaggccgggctccttttccccgtgggccgcatcggacggtacctgaagaaagggcggtac 209 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 |||||||| || ||| | ||||| ||||| | ||| |||||||||||||||||||||||| Sbjct: 210 gcgcagcgcgtgggcacgggcgctcccgtgttcctggccgccgtcctcgagtacctcgcc 269 Query: 294 gccgaggtcctggagctgg 312 || |||||||||||||||| Sbjct: 270 gctgaggtcctggagctgg 288
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 168 tccgcgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggc 227 |||| ||||||||| || || |||||||| ||||| |||| || | |||||| | || Sbjct: 92 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 151 Query: 228 tgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtac 287 ||||| | ||||| |||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 152 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 211 Query: 288 ctcgccgccgaggtcct 304 |||||||||||| |||| Sbjct: 212 ctcgccgccgagctcct 228
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 168 tccgcgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggc 227 |||| ||||||||| || || |||||||| ||||| |||| || | |||||| | || Sbjct: 163 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 222 Query: 228 tgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtac 287 ||||| | ||||| |||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 223 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 282 Query: 288 ctcgccgccgaggtcct 304 |||||||||||| |||| Sbjct: 283 ctcgccgccgagctcct 299
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 103 bits (52), Expect = 4e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 |||||||| || || ||||||||||||||||||| ||| |||||| ||| ||| Sbjct: 20924830 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaaggccggcaagtac 20924771 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 20924770 gccgagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 20924711 Query: 294 gccgaggt 301 |||||||| Sbjct: 20924710 gccgaggt 20924703 Score = 103 bits (52), Expect = 4e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14468963 agcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgccgccg 14468904 Query: 298 aggt 301 |||| Sbjct: 14468903 aggt 14468900
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 103 bits (52), Expect = 4e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 |||||||| || || ||||||||||||||||||| ||| |||||| ||| ||| Sbjct: 20851044 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaaggccggcaagtac 20850985 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 20850984 gccgagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 20850925 Query: 294 gccgaggt 301 |||||||| Sbjct: 20850924 gccgaggt 20850917 Score = 103 bits (52), Expect = 4e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14423247 agcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgccgccg 14423188 Query: 298 aggt 301 |||| Sbjct: 14423187 aggt 14423184
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 103 bits (52), Expect = 4e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 |||||||| || || ||||||||||||||||||| ||| |||||| ||| ||| Sbjct: 10320 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaaggccggcaagtac 10261 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10260 gccgagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 10201 Query: 294 gccgaggt 301 |||||||| Sbjct: 10200 gccgaggt 10193
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 103 bits (52), Expect = 4e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 |||||||| || || ||||||||||||||||||| ||| |||||| ||| ||| Sbjct: 34165 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaaggccggcaagtac 34224 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 34225 gccgagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 34284 Query: 294 gccgaggt 301 |||||||| Sbjct: 34285 gccgaggt 34292
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 103 bits (52), Expect = 4e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 48329 agcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgccgccg 48388 Query: 298 aggt 301 |||| Sbjct: 48389 aggt 48392
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 277 agcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgccgctg 336 Query: 298 aggtcctggagct 310 |||| || ||||| Sbjct: 337 aggtgctcgagct 349
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full insert sequence Length = 823 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 277 agcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgccgctg 336 Query: 298 aggtcctggagct 310 |||| || ||||| Sbjct: 337 aggtgctcgagct 349
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full insert sequence Length = 1718 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 278 agcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgccgctg 337 Query: 298 aggtcctggagct 310 |||| || ||||| Sbjct: 338 aggtgctcgagct 350
>ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 830 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 243 gtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 288 gtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgccgctgaggtt 347 Query: 303 ctggagct 310 || ||||| Sbjct: 348 cttgagct 355
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 21536516 agcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgccgctg 21536575 Query: 298 aggt 301 |||| Sbjct: 21536576 aggt 21536579 Score = 93.7 bits (47), Expect = 4e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 243 gtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 21539201 gtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgccgctgaggt 21539259
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 74300 agcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgccgctg 74359 Query: 298 aggt 301 |||| Sbjct: 74360 aggt 74363 Score = 93.7 bits (47), Expect = 4e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 243 gtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76985 gtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgccgctgaggt 77043
>dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D11, full insert sequence Length = 830 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 243 gtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 288 gtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgccgctgaggtt 347 Query: 303 ctggagct 310 || ||||| Sbjct: 348 cttgagct 355
>gb|AY104828.1| Zea mays PCO072413 mRNA sequence Length = 741 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 231 tacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctc 290 |||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 178 tacgcggagcgcgtcggcgccggcgcccccgtgtacctcgccgccgtcctcgagtacctc 237 Query: 291 gccgccgaggt 301 || || ||||| Sbjct: 238 gcggctgaggt 248
>dbj|D38091.1|WHTPH2AE Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-10 Length = 691 Score = 93.7 bits (47), Expect = 4e-16 Identities = 172/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || |||||||||||| | |||| ||||||||||| ||| ||| Sbjct: 148 aaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagtac 207 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || || | |||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 208 gccgagagggtcggcgccggcgcccccgtctacctcgccgccgtgctggagtatctcgcc 267 Query: 294 gccgaggtcctggagctggtcggcaatgcgaccaagggac-acaagaagagccgcgtcgt 352 || ||||| |||||| ||| ||| || ||| | |||||| ||||||||| |||| |||| Sbjct: 268 gctgaggttctggagttggccgggaacgcg-gcgagggacaacaagaagacccgcatcgt 326 Query: 353 gtcgcggcacctgctgctggccgtccgcaac 383 | |||| ||| | | ||| |||||||||||| Sbjct: 327 gccgcgccacatccagctcgccgtccgcaac 357
>dbj|D38089.1|WHTPH2AC Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-4 Length = 725 Score = 93.7 bits (47), Expect = 4e-16 Identities = 172/211 (81%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaaggctgctac 233 ||||||||||| || |||||||||||| | |||| ||||||||||| ||| ||| Sbjct: 146 aaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagtac 205 Query: 234 gcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgcc 293 || || | |||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 206 gccgagagggtcggcgccggcgcccccgtctacctcgccgccgtgctggagtatctcgcc 265 Query: 294 gccgaggtcctggagctggtcggcaatgcgaccaagggac-acaagaagagccgcgtcgt 352 || ||||| |||||| ||| ||| || ||| | |||||| ||||||||| |||| |||| Sbjct: 266 gctgaggttctggagttggccgggaacgcg-gcgagggacaacaagaagacccgcatcgt 324 Query: 353 gtcgcggcacctgctgctggccgtccgcaac 383 | |||| ||| | | ||| |||||||||||| Sbjct: 325 gccgcgccacatccagctcgccgtccgcaac 355
>emb|AJ245999.1|BNA245999 Brassica napus H2A gene for Histone H2A Length = 971 Score = 89.7 bits (45), Expect = 6e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 245 cggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 cggcgccggtgctcccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 507
>gb|AY104826.1| Zea mays PCO099353 mRNA sequence Length = 793 Score = 89.7 bits (45), Expect = 6e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||| Sbjct: 239 ccggcgcccctgtctacctcgcagctgtcctcgagtacctcgccgctgaggtcctggagc 298 Query: 310 t 310 | Sbjct: 299 t 299
>gb|BT016168.1| Zea mays clone Contig1 mRNA sequence Length = 676 Score = 87.7 bits (44), Expect = 2e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 165 cggtccgcgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaa 224 |||||| | ||||| |||||||| ||||||||||| ||||||| |||| |||||| Sbjct: 153 cggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcggtacctcaaggcc 212 Query: 225 ggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgag 284 || || ||| |||| |||||| |||| |||||||| |||||| ||||||| |||||| Sbjct: 213 gggaagtatgcggagcgcgtcggcgccggggcccccgtgtacctctccgccgttctcgag 272 Query: 285 tacctcgccgccgaggtcctggagctgg 312 || |||||||||||||| |||||||||| Sbjct: 273 tatctcgccgccgaggtgctggagctgg 300
>emb|X94693.1|TAH2A254 T.aestivum histone H2A gene Length = 2241 Score = 87.7 bits (44), Expect = 2e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 ||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1242 ccggcgcccccgtctacctcgccgccgtccttgagtacctcgccgctgaggt 1293
>gb|L75824.1|WHTHIH2AA Triticum aestivum histone H2A gene, complete cds Length = 2241 Score = 87.7 bits (44), Expect = 2e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 ||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1242 ccggcgcccccgtctacctcgccgccgtccttgagtacctcgccgctgaggt 1293
>gb|AY105006.1| Zea mays PCO108932 mRNA sequence Length = 841 Score = 87.7 bits (44), Expect = 2e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 165 cggtccgcgaaggccgggcttcaattccccgtcggccgcatcgatcggttcctcaacaaa 224 |||||| | ||||| |||||||| ||||||||||| ||||||| |||| |||||| Sbjct: 141 cggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcggtacctcaaggcc 200 Query: 225 ggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgag 284 || || ||| |||| |||||| |||| |||||||| |||||| ||||||| |||||| Sbjct: 201 gggaagtatgcggagcgcgtcggcgccggggcccccgtgtacctctccgccgttctcgag 260 Query: 285 tacctcgccgccgaggtcctggagctgg 312 || |||||||||||||| |||||||||| Sbjct: 261 tatctcgccgccgaggtgctggagctgg 288
>emb|CR709561.2|CNS0GAG5 Tetraodon nigroviridis full-length cDNA Length = 613 Score = 77.8 bits (39), Expect = 2e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||||||| |||| || ||||||||||| || |||||||| Sbjct: 161 caaaggcaactacgcggagcgagtcggcgccggggcgcccgtctacctggctgccgtcct 220 Query: 281 cgagtacctcgccgccgaggtcctggagctggtcggcaa 319 ||||| || |||||||| |||||||| ||| |||||| Sbjct: 221 ggagtatctgaccgccgagatcctggagttggccggcaa 259
>emb|CR705345.2|CNS0G771 Tetraodon nigroviridis full-length cDNA Length = 1250 Score = 77.8 bits (39), Expect = 2e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||||||| |||| || ||||||||||| || |||||||| Sbjct: 162 caaaggcaactacgcggagcgagtcggcgccggggcgcccgtctacctggctgccgtcct 221 Query: 281 cgagtacctcgccgccgaggtcctggagctggtcggcaa 319 ||||| || |||||||| |||||||| ||| |||||| Sbjct: 222 ggagtatctgaccgccgagatcctggagttggccggcaa 260
>gb|AY104637.1| Zea mays PCO070433 mRNA sequence Length = 767 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 241 gagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgagg 300 |||||||| |||||||||| ||||||||||| ||||| |||||||| || || || |||| Sbjct: 241 gagtcggcgccggcgcccctgtctacctcgctgccgtgctcgagtatcttgctgctgagg 300 Query: 301 tcctggagctggtcggcaatgcg 323 | || ||||||| |||||||||| Sbjct: 301 ttcttgagctggccggcaatgcg 323
>gb|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds Length = 2396 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||||||| | ||||| || |||||||| ||| |||||||| ||||||||| Sbjct: 1364 ccggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagc 1423 Query: 310 tggtcggcaatgc 322 ||| ||||||||| Sbjct: 1424 tggccggcaatgc 1436
>gb|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds Length = 2120 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||||||| | ||||| || |||||||| ||| |||||||| ||||||||| Sbjct: 942 ccggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagc 1001 Query: 310 tggtcggcaatgc 322 ||| ||||||||| Sbjct: 1002 tggccggcaatgc 1014
>gb|U70133.1|BBU70133 Bufo bufo gagarizans replication-dependent histone H2A mRNA, complete cds Length = 466 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||||||| | ||||| || |||||||| ||| |||||||| ||||||||| Sbjct: 158 ccggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagc 217 Query: 310 tggtcggcaatgc 322 ||| ||||||||| Sbjct: 218 tggccggcaatgc 230
>gb|AY389710.1| Hyacinthus orientalis histone H2A mRNA, partial cds Length = 677 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 243 gtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||||| |||| ||||| || ||||||||||||||| | |||||||||||||| |||||| Sbjct: 221 gtcggcgccggagccccggtgtacctcgccgccgtcttggagtacctcgccgctgaggtc 280 Query: 303 ctggagct 310 ||||||| Sbjct: 281 ttggagct 288 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 174 aaggccgggcttcaattccccgtcggccg 202 ||||||||||| || |||||||||||||| Sbjct: 152 aaggccgggctacagttccccgtcggccg 180
>gb|BT018361.1| Zea mays clone EL01N0311D03.c mRNA sequence Length = 675 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaa 319 ||||||| |||||||||||||| ||||||||||||| ||||||| |||||| Sbjct: 309 cgccgccatcctcgagtacctcaccgccgaggtcctcgagctggccggcaa 359
>ref|XM_391803.1| Gibberella zeae PH-1 H2A_NEUCR Histone H2A (FG11627.1) partial mRNA Length = 405 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| ||||| ||||| |||| || |||||||||||||| ||||||||||||||||| Sbjct: 123 ctacgctcagcgtgtcggtgccggtgctcccgtctacctcgctgccgtcctcgagtacct 182 Query: 290 cgc 292 ||| Sbjct: 183 cgc 185
>emb|CR700361.2|CNS0G3CL Tetraodon nigroviridis full-length cDNA Length = 547 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| ||||| |||||| |||||||||| |||||||| || ||||| || |||||||| Sbjct: 146 ctacgcccagcgtgtcggcgccggcgccccggtctacctggcggccgtgctggagtacct 205 Query: 290 cgccgccgaggtcctggagctgg 312 |||| ||| |||||||||||| Sbjct: 206 gaccgctgagatcctggagctgg 228 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 355 cgcggcacctgctgctggccgtccgcaac 383 |||||||||||| ||||||||| |||||| Sbjct: 271 cgcggcacctgcagctggccgtgcgcaac 299
>gb|AY104725.1| Zea mays PCO121651 mRNA sequence Length = 716 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 269 cgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaa 319 ||||||| |||||||||||||| ||||||||||||| ||||||| |||||| Sbjct: 307 cgccgccatcctcgagtacctcaccgccgaggtcctcgagctggccggcaa 357
>ref|XM_569065.1| Cryptococcus neoformans var. neoformans JEC21 histone H2A-1 (CNB00550) partial mRNA Length = 544 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| |||||| |||| ||||| || |||||||||||||| |||||||| |||||||| Sbjct: 177 ctacgcccagcgaatcggttccggtgctcccgtctacctcgctgccgtccttgagtacct 236 Query: 290 cgccgc 295 ||||| Sbjct: 237 tgccgc 242
>ref|XM_481315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 232 acgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcg 291 ||||||| || |||||| | ||| |||||||||||||||| |||||||||| |||||| | Sbjct: 422 acgcgcaacgcgtcggcactggcacccccgtctacctcgctgccgtcctcgggtaccttg 481 Query: 292 ccgccgagg 300 |||| |||| Sbjct: 482 ccgcagagg 490
>ref|XM_954349.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 143 ccggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 191
>ref|XM_331212.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 143 ccggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 191
>gb|AY062171.1| Neurospora crassa histone H2A (hh2A) and histone H2B (hh2B) genes, complete cds Length = 6309 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 829 ccggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 781
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 232 acgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcg 291 ||||||| || |||||| | ||| |||||||||||||||| |||||||||| |||||| | Sbjct: 57614 acgcgcaacgcgtcggcactggcacccccgtctacctcgctgccgtcctcgggtaccttg 57555 Query: 292 ccgccgagg 300 |||| |||| Sbjct: 57554 ccgcagagg 57546
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 232 acgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcg 291 ||||||| || |||||| | ||| |||||||||||||||| |||||||||| |||||| | Sbjct: 117469 acgcgcaacgcgtcggcactggcacccccgtctacctcgctgccgtcctcgggtaccttg 117410 Query: 292 ccgccgagg 300 |||| |||| Sbjct: 117409 ccgcagagg 117401
>gb|BC060324.1| Homo sapiens histone 2, H2ac, mRNA (cDNA clone MGC:74460 IMAGE:3892650), complete cds Length = 446 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| || || ||||||| ||||||||| | || || ||||| Sbjct: 143 caaaggcaactacgcggagcgggtgggggccggcgcgcccgtctacatggcggcggtcct 202 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 ||||||||| |||||||| |||||||||||| Sbjct: 203 cgagtacctgaccgccgagatcctggagctgg 234
>ref|NM_187762.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 417 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 279 ctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaagg 330 ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 214 ctcgagtacctaaccgccgaggtcctggagctggccggcaacgcgagcaagg 265
>ref|NM_003517.2| Homo sapiens histone 2, H2ac (HIST2H2AC), mRNA Length = 437 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| || || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgggtgggggccggcgcgcccgtctacatggcggcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 ||||||||| |||||||| |||||||||||| Sbjct: 168 cgagtacctgaccgccgagatcctggagctgg 199
>gb|AY648852.1| Homo sapiens histone H2A/r gene, complete cds Length = 1119 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| || || ||||||| ||||||||| | || || ||||| Sbjct: 481 caaaggcaactacgcggagcgggtgggggccggcgcgcccgtctacatggcggcggtcct 540 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 ||||||||| |||||||| |||||||||||| Sbjct: 541 cgagtacctgaccgccgagatcctggagctgg 572
>gb|BC019308.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:4205 IMAGE:2823572), complete cds Length = 567 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 146 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 205 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 206 cgagtatctgaccgccgagatcctggagctgg 237
>gb|BC001629.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:2238 IMAGE:3536984), complete cds Length = 567 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 146 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 205 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 206 cgagtatctgaccgccgagatcctggagctgg 237
>ref|NM_003516.2| Homo sapiens histone 2, H2aa (HIST2H2AA), mRNA Length = 534 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 161 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 220 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 221 cgagtatctgaccgccgagatcctggagctgg 252
>emb|AL591493.14| Human DNA sequence from clone RP11-196G18 on chromosome 1 Contains a ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1) pseudogene, the FCGR1A gene for Fc fragment of IgG, high affinity Ia, receptor for (CD64), a novel gene similar to histone 2, H2be (HIST2H2BE), a novel gene similar to histone 2, H3c (HIST2H3C), the HIST2H4 gene for histone 2, H4, the HIST2H3C gene for histone 2, H3c, the HIST2H2AA gene for histone 2, H2aa, a histone 2, H2bd pseudogene (HIST2H2BD), a histone 2, H2bc pseudogene (HIST2H2BC), a novel gene similar to histone 2, H2aa (HIST2H2AA), a novel gene similar to histone 2, H3c (HIST2H3C), a novel gene similar to histone 1, H4 (HIST2H4), the HIST2H2BE gene for histone 2, H2be, the HIST2H2AC gene for histone 2, H2ac, the HIST2H2AB gene for histone 2, H2ab, a novel protein similar to histone 2, a novel gene, the SV2A gene for synaptic vesicle glycoprotein 2A, the 3' end of the SF3B4 gene for splicing factor 3b, subunit 4, 49kDa and five CpG islands, complete sequence Length = 188956 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| || || ||||||| ||||||||| | || || ||||| Sbjct: 148792 caaaggcaactacgcggagcgggtgggggccggcgcgcccgtctacatggcggcggtcct 148851 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 ||||||||| |||||||| |||||||||||| Sbjct: 148852 cgagtacctgaccgccgagatcctggagctgg 148883 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 112948 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 113007 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 113008 cgagtatctgaccgccgagatcctggagctgg 113039 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 104318 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 104259 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 104258 cgagtatctgaccgccgagatcctggagctgg 104227 Score = 42.1 bits (21), Expect = 1.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| ||||| | |||||||| || ||||| || || ||||| Sbjct: 149519 caaaggcaactacgcggagcgggtcggggcaggcgccccggtgtacctggcggcggtcct 149460 Query: 281 cgagtacct 289 ||||||||| Sbjct: 149459 cgagtacct 149451
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 279 ctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaagg 330 ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 75700 ctcgagtacctaaccgccgaggtcctggagctggccggcaacgcgagcaagg 75649
>ref|XM_928387.1| PREDICTED: Homo sapiens similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC653610), mRNA Length = 962 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 315 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 374 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 375 cgagtatctgaccgccgagatcctggagctgg 406
>emb|CR541872.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0133D for gene HIST2H2AA, histone 2, H2aa; complete cds, without stopcodon Length = 390 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 168 cgagtatctgaccgccgagatcctggagctgg 199
>emb|CR536525.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0422D for gene HIST2H2AA, histone 2, H2aa; complete cds, incl. stopcodon Length = 393 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 168 cgagtatctgaccgccgagatcctggagctgg 199
>dbj|AK121533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P21, full insert sequence Length = 817 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 279 ctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaagg 330 ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 309 ctcgagtacctaaccgccgaggtcctggagctggccggcaacgcgagcaagg 360
>gb|AY894055.1| Synthetic construct Homo sapiens clone FLH131281.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 168 cgagtatctgaccgccgagatcctggagctgg 199
>gb|AY894054.1| Synthetic construct Homo sapiens clone FLH130836.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 168 cgagtatctgaccgccgagatcctggagctgg 199
>gb|BC098171.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120084 IMAGE:40021706), complete cds Length = 480 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 168 cgagtatctgaccgccgagatcctggagctgg 199
>gb|BC096739.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120085 IMAGE:40021707), complete cds Length = 480 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 168 cgagtatctgaccgccgagatcctggagctgg 199
>dbj|AK061605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C05, full insert sequence Length = 785 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 279 ctcgagtacctcgccgccgaggtcctggagctggtcggcaatgcgaccaagg 330 ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 304 ctcgagtacctaaccgccgaggtcctggagctggccggcaacgcgagcaagg 355
>gb|AY108339.1| Zea mays PCO070432 mRNA sequence Length = 811 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 243 gtcggctccggcgcccccgtctacctcgccgccgtcctcgagta 286 |||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 243 gtcggcgccggcgcccccgtctacctcgctgccgtgctcgagta 286
>gb|L19779.1|HUMH2A2A Homo sapiens histone H2A.2 mRNA, complete cds Length = 564 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 161 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 220 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 221 cgagtatctgaccgccgagatcctggagctgg 252
>gb|AY131973.1| Homo sapiens histone H2A (HIST2H2AC) gene, complete cds Length = 1119 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| || || ||||||| ||||||||| | || || ||||| Sbjct: 481 caaaggcaactacgcggagcgggtgggggccggcgcgcccgtctacatggcggcggtcct 540 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 ||||||||| |||||||| |||||||||||| Sbjct: 541 cgagtacctgaccgccgagatcctggagctgg 572
>gb|AY131971.1| Homo sapiens histone H2A (HIST2H2AA) gene, complete cds Length = 1173 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 499 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 558 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 559 cgagtatctgaccgccgagatcctggagctgg 590
>gb|AY389592.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 635 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 231 tacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctc 290 ||||| ||||| ||||| |||| || || |||||||| |||||||||||||||||||| Sbjct: 157 tacgctcagcgtgtcggtaccggagctccggtctaccttgccgccgtcctcgagtaccta 216 Query: 291 gccgccgaggt 301 ||||| ||||| Sbjct: 217 gccgcagaggt 227
>gb|AY389588.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 643 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 231 tacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctc 290 ||||| ||||| |||||| |||| || || |||||||||||||||||| | ||||||||| Sbjct: 172 tacgctcagcgtgtcggcaccggagctccggtctacctcgccgccgtcttggagtacctc 231 Query: 291 gccgccgaggt 301 || || ||||| Sbjct: 232 gctgctgaggt 242
>emb|CR673199.2|CNS0FIET Tetraodon nigroviridis full-length cDNA Length = 775 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaa 319 |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||||| Sbjct: 187 gtctacctggccgccgtgctggagtacctgaccgccgagatcctggagctggccggcaa 245
>emb|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene Length = 5705 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccg 297 |||||||||| |||| ||||||||||||||||||||||| ||||| || ||| |||| | Sbjct: 3383 agcgagtcggagccggtgcccccgtctacctcgccgccgtactcgaatatctctccgctg 3324 Query: 298 aggtcct 304 | ||||| Sbjct: 3323 aagtcct 3317
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcg 207 |||||||||||||| || |||| ||||||||||| ||||||||||||||||| |||| Sbjct: 36443 gaagaaggcggtgacgcgctccgtcaaggccgggctccaattccccgtcggccgtatcg 36501
>ref|XM_610233.2| PREDICTED: Bos taurus similar to Histone H2AFX (Histone H2A.X) (H2a/x) (LOC531733), mRNA Length = 1724 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| || |||||||| || || || |||||||||||| |||| ||| ||||||||| Sbjct: 626 ccggcgcgccggtctacctggcggcggtactcgagtacctcaccgctgagatcctggagc 685 Query: 310 tggtcggcaatgcg 323 ||| ||||||||| Sbjct: 686 tggcgggcaatgcg 699
>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II), histone H2B (ch2b-II) and histone H2A (ch2a-II) genes, complete cds Length = 3777 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||| ||||| ||||| || ||||||||||| |||| ||||| ||||||| Sbjct: 3356 ccggcgcgcccgtgtacctggccgctgtgctcgagtacctgaccgctgaggtgctggagc 3415 Query: 310 tggtcggcaa 319 ||| |||||| Sbjct: 3416 tggccggcaa 3425
>ref|XM_504426.1| Yarrowia lipolytica CLIB122, YALI0E26477g predicted mRNA Length = 408 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 255 gcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 299 |||||| |||||||||| |||||||| ||||||||||||| |||| Sbjct: 151 gcccccatctacctcgctgccgtccttgagtacctcgccgtcgag 195
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| ||||| ||||| |||| || ||||||||||||||||| || || |||||||| Sbjct: 20155 ctacgctcagcgtgtcggtgccggtgctcccgtctacctcgccgctgttcttgagtacct 20096 Query: 290 cgccgccga 298 ||| ||||| Sbjct: 20095 cgctgccga 20087
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 255 gcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 299 |||||| |||||||||| |||||||| ||||||||||||| |||| Sbjct: 3143137 gcccccatctacctcgctgccgtccttgagtacctcgccgtcgag 3143181
>gb|M11085.1|SUPHIS2A2 Sea urchin (P.miliaris) late histone H2A-2 late mRNA, complete cds Length = 430 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 255 gcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtc 314 ||||| || |||||||| |||||||||||||||||| |||| ||| |||| ||||| | | Sbjct: 154 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 213 Query: 315 ggcaa 319 ||||| Sbjct: 214 ggcaa 218
>gb|M14140.1|SUPH2B2 P.miliaris histone H2A-2.1 gene, complete cds Length = 375 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 255 gcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtc 314 ||||| || |||||||| |||||||||||||||||| |||| ||| |||| ||||| | | Sbjct: 139 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 198 Query: 315 ggcaa 319 ||||| Sbjct: 199 ggcaa 203
>gb|M14141.1|SUPH2A2 P.miliaris histone H2A-2.2 gene, complete cds Length = 375 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 255 gcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtc 314 ||||| || |||||||| |||||||||||||||||| |||| ||| |||| ||||| | | Sbjct: 139 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 198 Query: 315 ggcaa 319 ||||| Sbjct: 199 ggcaa 203
>emb|AL590462.1|CNS07EGJ DNA centromeric region sequence BAC 34F04 of chromosome 5 of Podospora anserina Length = 103568 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| ||||| ||||| |||| || ||||||||||||||||| || || |||||||| Sbjct: 84956 ctacgctcagcgtgtcggtgccggtgctcccgtctacctcgccgctgttcttgagtacct 85015 Query: 290 cgccgccga 298 ||| ||||| Sbjct: 85016 cgctgccga 85024
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 262 tctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||||| ||||| || |||||||||||||| Sbjct: 76229 tctacctcgccgccgttctcgaatatctcgccgccgaggt 76268
>ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880 mRNA, complete cds Length = 725 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctgg 312 ||||| ||| |||| || ||||||||||||||||||||||| ||||||||| Sbjct: 274 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctgg 325
>ref|XM_513764.1| PREDICTED: Pan troglodytes LOC457261 (LOC457261), mRNA Length = 789 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||| ||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 513 caaaggcaactatgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 572 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||||||| |||||||||||| Sbjct: 573 cgagtatctgaccgccgagatcctggagctgg 604
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagt 285 |||||| |||||| |||| ||||| || |||||||||||||| |||||||| |||| Sbjct: 161890 ctacgcccagcgaatcggttccggtgctcccgtctacctcgctgccgtccttgagt 161835
>gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds Length = 429 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctgg 312 ||||| ||| |||| || ||||||||||||||||||||||| ||||||||| Sbjct: 169 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctgg 220
>gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds Length = 687 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctgg 312 ||||| ||| |||| || ||||||||||||||||||||||| ||||||||| Sbjct: 271 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctgg 322
>dbj|AB168678.1| Macaca fascicularis testis cDNA clone: QtsA-14092, similar to human histone 2, H2aa (HIST2H2AA), mRNA, RefSeq: NM_003516.2 Length = 778 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| |||| || || ||||||| || |||||| | || || ||||| Sbjct: 307 caaaggcaactacgcggagcgggtgggggccggcgcgccagtctacatggcggcggtcct 366 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 ||||||||| |||||||| |||||||||||| Sbjct: 367 cgagtacctgaccgccgagatcctggagctgg 398
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 229 gctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccg 276 |||| |||||||| |||||| |||||| ||||||||||||||||||| Sbjct: 7508177 gctatgcgcagcgcgtcggcatcggcgcacccgtctacctcgccgccg 7508224
>emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctgg 312 ||||| ||| |||| || ||||||||||||||||||||||| ||||||||| Sbjct: 242 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctgg 293
>emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctgg 312 ||||| ||| |||| || ||||||||||||||||||||||| ||||||||| Sbjct: 237 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctgg 288
>gb|AY087924.1| Arabidopsis thaliana clone 39667 mRNA, complete sequence Length = 728 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctgg 312 ||||| ||| |||| || ||||||||||||||||||||||| ||||||||| Sbjct: 278 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctgg 329
>gb|BC096705.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120083 IMAGE:40021705), complete cds Length = 480 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| ||||||| ||||||| || ||||||| ||||||||| | || || ||||| Sbjct: 108 caaaggcaactacgcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||| || |||| ||| |||||||||||| Sbjct: 168 cgagtatctgaccgctgagatcctggagctgg 199
>gb|AY110108.1| Zea mays CL14299_1 mRNA sequence Length = 712 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 258 cccgtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||| |||||||||||||||| ||||| || ||||| Sbjct: 487 cccgtctacctctccgccgtcctcgagtatctcgcggcagaggt 444 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 174 aaggccgggcttcaattccccgtcggccgcatcg 207 ||||||||||| || ||||||||||||||||||| Sbjct: 571 aaggccgggctgcagttccccgtcggccgcatcg 538
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 229 gctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccg 276 |||| |||||||| |||||| |||||| ||||||||||||||||||| Sbjct: 30650 gctatgcgcagcgcgtcggcatcggcgcacccgtctacctcgccgccg 30697
>ref|NM_122649.2| Arabidopsis thaliana DNA binding AT5G27670 mRNA, complete cds Length = 774 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 271 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagct 317
>ref|XM_361034.1| Magnaporthe grisea 70-15 hypothetical protein (MG03577.4) partial mRNA Length = 411 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| ||||| ||||| |||| || |||||||| || || ||||||||||||||||| Sbjct: 123 ctacgcccagcgtgtcggtgccggtgctcccgtctatctggctgccgtcctcgagtacct 182 Query: 290 cgc 292 ||| Sbjct: 183 cgc 185
>ref|XM_425469.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427895), mRNA Length = 390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 117 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 176 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 177 gacggccgagatcctggagctgg 199
>ref|XM_425467.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427893), mRNA Length = 390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 117 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 176 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 177 gacggccgagatcctggagctgg 199
>ref|XM_425465.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427891), mRNA Length = 390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 117 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 176 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 177 gacggccgagatcctggagctgg 199
>ref|XM_425459.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427885), mRNA Length = 918 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 117 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 176 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 177 gacggccgagatcctggagctgg 199
>ref|XM_425455.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427881), mRNA Length = 534 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 261 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 320 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 321 gacggccgagatcctggagctgg 343
>ref|XM_416195.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC417955), mRNA Length = 1220 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 947 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 1006 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 1007 gacggccgagatcctggagctgg 1029
>ref|XM_416193.1| PREDICTED: Gallus gallus similar to histone protein Hist2h3c1 (LOC417953), mRNA Length = 2271 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 1414 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 1355 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 1354 gacggccgagatcctggagctgg 1332
>ref|XM_416192.1| PREDICTED: Gallus gallus similar to germinal histone H4 gene (LOC417952), mRNA Length = 1374 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 973 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 914 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 913 gacggccgagatcctggagctgg 891
>ref|NM_178185.1| Mus musculus histone 1, H2ao (Hist1h2ao), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 137 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 196 Query: 310 tgg 312 ||| Sbjct: 197 tgg 199
>ref|XM_978341.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 2 (LOC665433), mRNA Length = 465 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 169 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 228 Query: 310 tgg 312 ||| Sbjct: 229 tgg 231
>ref|XM_978296.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 1 (LOC665433), mRNA Length = 467 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 171 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 230 Query: 310 tgg 312 ||| Sbjct: 231 tgg 233
>ref|XM_752558.1| Ustilago maydis 521 histone H2A (UM01504.1) partial mRNA Length = 411 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgag 299 ||||||||||||||||| ||||||||||| || |||||| Sbjct: 157 gtctacctcgccgccgttctcgagtacctggctgccgag 195
>emb|X07763.1|GGH2AB8 Chicken DNA for pCH3.5E histone H2A/H2B sequence Length = 1017 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 190 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 131 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 130 gacggccgagatcctggagctgg 108
>emb|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene Length = 8384 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 5048 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 5107 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 5108 gacggccgagatcctggagctgg 5130 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 2396 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 2337 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 2336 gacggccgagatcctggagctgg 2314
>emb|AL592149.8| Mouse DNA sequence from clone RP23-283N14 on chromosome 13 Contains a novel gene, the genes for three H1, four H2a, five H2b, four H3 and four H4 histone family members, the 3' end of a variant of the Hfe gene for hemochromatosis protein (Mr2) and ten CpG islands, complete sequence Length = 184730 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 164196 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 164137 Query: 310 tgg 312 ||| Sbjct: 164136 tgg 164134 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Minus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 51607 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 51548 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 51547 ggagtacctgacggccgagatcctggagctgg 51516 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 55213 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 55272 Query: 310 tgg 312 ||| Sbjct: 55273 tgg 55275 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 14649 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 14708 Query: 310 tgg 312 ||| Sbjct: 14709 tgg 14711
>ref|NM_178189.2| Mus musculus histone 1, H2ac (Hist1h2ac), mRNA Length = 2493 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 181 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 240 Query: 310 tgg 312 ||| Sbjct: 241 tgg 243
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 33506 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 33447 Query: 310 tgg 312 ||| Sbjct: 33446 tgg 33444 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 10770 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 10829 Query: 310 tgg 312 ||| Sbjct: 10830 tgg 10832
>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121, the Prss16 gene for thymus serine protease16, three novel genes, the genes for two H2a, two H2b and one H4 histone family members, a ribosomal protein L37A (Rpl37a) pseudogene, a novel pseudogene, three genes for novel vomeronasal 1 receptor H (V1rh) family members, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, six V1ri pseudogenes, a V1rh pseudogene and six CpG islands, complete sequence Length = 210845 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 60147 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 60088 Query: 310 tgg 312 ||| Sbjct: 60087 tgg 60085 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 52772 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 52713 Query: 310 tgg 312 ||| Sbjct: 52712 tgg 52710
>gb|BC065803.1| Mus musculus histone 1, H2ag, mRNA (cDNA clone MGC:73771 IMAGE:1263745), complete cds Length = 527 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 159 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 218 Query: 310 tgg 312 ||| Sbjct: 219 tgg 221
>dbj|AK145443.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0045N09 product:histone 1, H2ad, full insert sequence Length = 446 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 170 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 229 Query: 310 tgg 312 ||| Sbjct: 230 tgg 232
>gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds Length = 453 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 181 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagct 227
>dbj|AK146846.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920064A15 product:histone 1, H2ad, full insert sequence Length = 445 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 168 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 227 Query: 310 tgg 312 ||| Sbjct: 228 tgg 230
>gb|BC062251.1| Mus musculus cDNA clone MGC:73635 IMAGE:1224905, complete cds Length = 444 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 149 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 208 Query: 310 tgg 312 ||| Sbjct: 209 tgg 211
>ref|NM_178186.2| Mus musculus histone 1, H2ag (Hist1h2ag), mRNA Length = 527 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 159 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 218 Query: 310 tgg 312 ||| Sbjct: 219 tgg 221
>gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds Length = 759 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 270 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagct 316
>dbj|AK033518.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030420B16 product:histone 1, H2ac, full insert sequence Length = 2493 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 181 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 240 Query: 310 tgg 312 ||| Sbjct: 241 tgg 243
>gb|AY760064.1| Muntiacus muntjak vaginalis H2A histone family member X (H2AX) mRNA, partial cds Length = 300 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| || |||||||| || || || |||||||||||| |||| ||| ||||||||| Sbjct: 98 ccggcgcgccggtctacctggcggcggtactcgagtacctcaccgctgagatcctggagc 157 Query: 310 tgg 312 ||| Sbjct: 158 tgg 160
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcg 207 |||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 7800478 gaagaaggcggtgacacgctccgtcaaggccgggctccagttccccgtcggccgtatcg 7800536 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgggaggaagggcggcaaga 147 |||||||||||||||||||| Sbjct: 18151476 cgggaggaagggcggcaaga 18151495
>gb|AY158937.1| Mus musculus histone protein Hist1h2bc gene, complete cds Length = 1401 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 133 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 74 Query: 310 tgg 312 ||| Sbjct: 73 tgg 71
>gb|AY158919.1| Mus musculus histone protein Hist1h2ac gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 637 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 696 Query: 310 tgg 312 ||| Sbjct: 697 tgg 699
>gb|AY158915.1| Mus musculus histone protein Hist1h2ag gene, complete cds Length = 1392 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 636 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 695 Query: 310 tgg 312 ||| Sbjct: 696 tgg 698
>gb|AY158913.1| Mus musculus histone protein Hist1h2ao gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| |||||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 637 ccggcgccccggtctacctggcggccgtgctggagtacctgacggccgagatcctggagc 696 Query: 310 tgg 312 ||| Sbjct: 697 tgg 699
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcg 207 |||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 14860 gaagaaggcggtgacacgctccgtcaaggccgggctccagttccccgtcggccgtatcg 14918
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 149 gaagaaggcggtgagccggtccgcgaaggccgggcttcaattccccgtcggccgcatcg 207 |||||||||||||| || |||| ||||||||||| || |||||||||||||| |||| Sbjct: 112976 gaagaaggcggtgacacgctccgtcaaggccgggctccagttccccgtcggccgtatcg 113034
>dbj|D11055.1|CHKH2A4H Gallus gallus gene for H2A histone, complete cds Length = 1028 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 448 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 507 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 508 gacggccgagatcctggagctgg 530
>dbj|D11054.1|CHKH2A3H Gallus gallus gene for H2A histone, complete cds Length = 1495 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 470 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 529 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 530 gacggccgagatcctggagctgg 552
>gb|U38933.1|GGU38933 Gallus gallus histone H2A (H2A-VIII) gene, complete cds Length = 740 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 295 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 354 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 355 gacggccgagatcctggagctgg 377
>gb|U38932.1|GGU38932 Gallus gallus histone H2A (H2A-VII) gene, complete cds Length = 827 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 278 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 337 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 338 gacggccgagatcctggagctgg 360
>gb|U38931.1|GGU38931 Gallus gallus histone H2A (H2A-VI) gene, complete cds Length = 743 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| |||||||||| || ||||| || ||||| || |||||||| Sbjct: 140 ctacgcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacct 199 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 200 gacggccgagatcctggagctgg 222
>gb|AY850346.1| Magnaporthe grisea histone H2A-like protein mRNA, complete cds Length = 736 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 |||||| ||||| ||||| |||| || |||||||| || || ||||||||||||||||| Sbjct: 240 ctacgcccagcgtgtcggtgccggtgctcccgtctatctggctgccgtcctcgagtacct 299 Query: 290 cgc 292 ||| Sbjct: 300 cgc 302
>ref|XM_525084.1| PREDICTED: Pan troglodytes similar to Histone H2A.1 (LOC469700), mRNA Length = 393 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| ||||| || ||||| || ||||||||||| | |||||| ||||||||| Sbjct: 137 ccggcgccccggtctatctggccgcggtgctcgagtacctgactgccgagatcctggagc 196 Query: 310 tggtcggcaa 319 | | |||||| Sbjct: 197 ttgccggcaa 206
>emb|CR722682.2|CNS0GKKG Tetraodon nigroviridis full-length cDNA Length = 824 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 258 cccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggc 317 ||||||||||| ||||| ||||| || ||||| |||||||| |||||||| ||| |||| Sbjct: 173 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 232 Query: 318 aa 319 || Sbjct: 233 aa 234
>ref|XM_761869.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_397_9413_9787) partial mRNA Length = 375 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 249 tccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||| ||| |||||||||||||| |||||||||||| || ||| ||| |||||| Sbjct: 127 tccgacgcgcccgtctacctcgcggccgtcctcgagaacgtcgtcgcagaggtc 180
>ref|XM_766102.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_12_46633_46109) partial mRNA Length = 525 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 249 tccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||| ||| |||||||||||||| |||||||||||| || ||| ||| |||||| Sbjct: 231 tccgacgcgcccgtctacctcgcggccgtcctcgagaacgtcgtcgcagaggtc 178
>ref|XM_766103.1| Giardia lamblia ATCC 50803 histone H2A (GLP_12_46277_46651) partial mRNA Length = 375 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 249 tccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||| ||| |||||||||||||| |||||||||||| || ||| ||| |||||| Sbjct: 127 tccgacgcgcccgtctacctcgcggccgtcctcgagaacgtcgtcgcagaggtc 180
>emb|CR673736.2|CNS0FITQ Tetraodon nigroviridis full-length cDNA Length = 767 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 258 cccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggc 317 ||||||||||| ||||| ||||| || ||||| |||||||| |||||||| ||| |||| Sbjct: 132 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 191 Query: 318 aa 319 || Sbjct: 192 aa 193
>emb|CR659269.2|CNS0F7NV Tetraodon nigroviridis full-length cDNA Length = 805 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 258 cccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggc 317 ||||||||||| ||||| ||||| || ||||| |||||||| |||||||| ||| |||| Sbjct: 171 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 230 Query: 318 aa 319 || Sbjct: 231 aa 232
>gb|AY849374.1| Emiliania huxleyi histone H2A mRNA, complete cds Length = 680 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagct 310 |||||||| |||||||||||||||||| | || |||||||| || ||||| Sbjct: 142 gtctacctggccgccgtcctcgagtacatggcggccgaggtgctcgagct 191
>emb|AJ494853.1|ODI494853 Oikopleura dioica mRNA for histone H2A.1a (H2A.1a gene) Length = 509 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcga 283 |||||||||| | ||||| || ||||||||||||||||||||||| Sbjct: 127 agcgagtcggagctggcgcaccagtctacctcgccgccgtcctcga 172
>gb|AF139873.1|AF139873 Giardia intestinalis histone H2A gene, complete cds Length = 1682 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 249 tccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtc 302 |||| ||| |||||||||||||| |||||||||||| || ||| ||| |||||| Sbjct: 1111 tccgacgcgcccgtctacctcgcggccgtcctcgagaacgtcgtcgcagaggtc 1164
>gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana Clone T1G16 From Chromosome V, complete sequence Length = 93672 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 13438 tacctcgccgccgttctcgaatacctagccgccgaggt 13401
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccgaggt 301 |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 102472 tacctcgccgccgttctcgaatacctagccgccgaggt 102435
>gb|AF149252.1|AF149252 Brassica napus fertility-related marker Length = 805 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 150 gtctatctcgcagccgttctagagtacctcgccgccgaggt 190
>ref|XM_576399.1| PREDICTED: Rattus norvegicus similar to Histone H2A.x (H2a/x) (LOC500987), mRNA Length = 1569 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Plus Query: 252 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctg 311 ||||| ||||| ||||| || || || |||||||||||| | |||||| ||||||||||| Sbjct: 418 ggcgcgcccgtgtacctggcggcggtgctcgagtacctcactgccgagatcctggagctg 477 Query: 312 g 312 | Sbjct: 478 g 478
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggt 301 ||||| ||| |||| || ||||||||||||||||||||||| Sbjct: 95679 gtctatctctccgctgttctcgagtacctcgccgccgaggt 95719
>gb|M31922.1|VVCH4AB V.carteri histone H2A-IV and H2B-IV genes, complete cds Length = 2132 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 252 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctg 311 ||||||||||||||||| ||||| || || |||||||| | || ||||| ||||||||| Sbjct: 692 ggcgcccccgtctacctggccgctgtgctggagtacctgactgctgaggttctggagctg 633 Query: 312 g 312 | Sbjct: 632 g 632
>gb|M11084.1|SUPHIS2A1 Sea urchin (P.miliaris) late histone H2A-1 late mRNA, complete cds Length = 465 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 255 gcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtc 314 ||||| || |||||||| ||||| |||||||||||| |||| ||| |||| ||||| | | Sbjct: 180 gccccagtgtacctcgcagccgtactcgagtacctcaccgctgagatcctcgagctcgcc 239 Query: 315 ggcaa 319 ||||| Sbjct: 240 ggcaa 244
>gb|BC046078.1| Danio rerio H2A histone family, member X, mRNA (cDNA clone MGC:56329 IMAGE:5603679), complete cds Length = 643 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| ||| |||| |||||||| || || |||||||| ||||||||||| Sbjct: 168 agcgagtgggcgccggtgcccccgtgtatctggccgccgtgctcgagtacct 219
>ref|NM_201073.1| Danio rerio H2A histone family, member X (h2afx), mRNA Length = 643 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| ||| |||| |||||||| || || |||||||| ||||||||||| Sbjct: 168 agcgagtgggcgccggtgcccccgtgtatctggccgccgtgctcgagtacct 219
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 64377 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 64436 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 64437 ggagtacctgacggccgagatcctggagctgg 64468 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 101331 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 101272 Query: 310 tgg 312 ||| Sbjct: 101271 tgg 101269 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 60771 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 60712 Query: 310 tgg 312 ||| Sbjct: 60711 tgg 60709
>gb|BC058544.1| Mus musculus cDNA clone IMAGE:5711765, with apparent retained intron Length = 497 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 139 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 198 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 199 ggagtacctgacggccgagatcctggagctgg 230
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Minus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 174710 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcagccgtgct 174651 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 174650 agagtacctgacggccgagatcctggagctgg 174619 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 208072 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 208013 Query: 310 tgg 312 ||| Sbjct: 208012 tgg 208010 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 142673 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 142614 Query: 310 tgg 312 ||| Sbjct: 142613 tgg 142611 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 137548 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 137607 Query: 310 tgg 312 ||| Sbjct: 137608 tgg 137610
>gb|BC076498.1| Mus musculus histone 1, H2ae, mRNA (cDNA clone MGC:90847 IMAGE:5713252), complete cds Length = 492 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 138 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 197 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 198 ggagtacctgacggccgagatcctggagctgg 229
>ref|NM_178187.2| Mus musculus histone 1, H2ae (Hist1h2ae), mRNA Length = 705 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 221 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 280 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 281 ggagtacctgacggccgagatcctggagctgg 312
>dbj|AK028026.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190022L06 product:HISTONE H2A homolog [Homo sapiens], full insert sequence Length = 705 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 221 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 280 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 281 ggagtacctgacggccgagatcctggagctgg 312
>emb|BX294169.10| Zebrafish DNA sequence from clone DKEY-151N15 in linkage group 5, complete sequence Length = 73230 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| ||| |||| |||||||| || || |||||||| ||||||||||| Sbjct: 6425 agcgagtgggcgccggtgcccccgtgtatctggccgccgtgctcgagtacct 6476
>ref|NM_178183.1| Mus musculus histone 1, H2ak (Hist1h2ak), mRNA Length = 393 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 108 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcagccgtgct 167 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 168 agagtacctgacggccgagatcctggagctgg 199
>gb|AY158929.1| Mus musculus histone protein Hist1h2bn gene, complete cds Length = 1375 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Minus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 95 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcagccgtgct 36 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 35 agagtacctgacggccgagatcctggagctgg 4
>gb|AY158917.1| Mus musculus histone protein Hist1h2ae gene, complete cds Length = 1390 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 608 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcggccgtgct 667 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 668 ggagtacctgacggccgagatcctggagctgg 699
>gb|AY158911.1| Mus musculus histone protein Hist1h2ak gene, complete cds Length = 1201 Score = 48.1 bits (24), Expect = 0.021 Identities = 75/92 (81%) Strand = Plus / Plus Query: 221 caaaggctgctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 ||||||| |||| || |||| || ||| |||||||||| || ||||| || ||||| || Sbjct: 642 caaaggcaactactcggagcgcgtgggcgccggcgccccggtgtacctggcagccgtgct 701 Query: 281 cgagtacctcgccgccgaggtcctggagctgg 312 |||||||| | |||||| |||||||||||| Sbjct: 702 agagtacctgacggccgagatcctggagctgg 733
>gb|DQ214188.1| Taeniopygia guttata clone 0058P0024E05 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 46.1 bits (23), Expect = 0.083 Identities = 68/83 (81%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| ||||||| || || ||||| || ||||| || |||||||| Sbjct: 200 ctacgcggagcgcgtgggcgccggcgcgccggtgtacctggcggccgtgctggagtacct 259 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 260 gacggccgagatcctggagctgg 282
>gb|DQ214187.1| Taeniopygia guttata clone 0058P0044E04 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 46.1 bits (23), Expect = 0.083 Identities = 68/83 (81%) Strand = Plus / Plus Query: 230 ctacgcgcagcgagtcggctccggcgcccccgtctacctcgccgccgtcctcgagtacct 289 ||||||| |||| || ||| ||||||| || || ||||| || ||||| || |||||||| Sbjct: 200 ctacgcggagcgcgtgggcgccggcgcgccggtgtacctggcggccgtgctggagtacct 259 Query: 290 cgccgccgaggtcctggagctgg 312 | |||||| |||||||||||| Sbjct: 260 gacggccgagatcctggagctgg 282
>gb|BC077427.1| Xenopus laevis MGC82198 protein, mRNA (cDNA clone MGC:82198 IMAGE:3402168), complete cds Length = 1591 Score = 46.1 bits (23), Expect = 0.083 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctggtcggcaa 319 ||||| |||||||| || ||||||||||| |||| ||| |||||||| ||| |||||| Sbjct: 156 gtctatctcgccgcagtgctcgagtacctgaccgctgagatcctggagttggccggcaa 214
>ref|NG_002734.1| Mus musculus histone 1, H2aj (Hist1h2aj) pseudogene on chromosome 13 Length = 1357 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 619 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 678 Query: 310 tgg 312 ||| Sbjct: 679 tgg 681
>ref|XM_540292.2| PREDICTED: Canis familiaris similar to histone 2, H2ac (LOC483174), mRNA Length = 485 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||||||| | || ||||| || |||||||| | |||||| ||||||||| Sbjct: 194 ccggcgctcccgtctacatggcggccgtgctggagtacctgacggccgagatcctggagc 253 Query: 310 tgg 312 ||| Sbjct: 254 tgg 256
>ref|XM_845715.1| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC608631), mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||||||| | || ||||| || |||||||| | |||||| ||||||||| Sbjct: 172 ccggcgctcccgtctacatggcggccgtgctggagtacctgacggccgagatcctggagc 231 Query: 310 tgg 312 ||| Sbjct: 232 tgg 234
>ref|XM_540286.2| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC483168), mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| ||||||||| | || ||||| || |||||||| | |||||| ||||||||| Sbjct: 172 ccggcgctcccgtctacatggcggccgtgctggagtacctgacggccgagatcctggagc 231 Query: 310 tgg 312 ||| Sbjct: 232 tgg 234
>ref|XM_848163.1| PREDICTED: Canis familiaris similar to Histone H2A.x (H2a/x) (LOC489372), mRNA Length = 841 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 ||||||| || || ||||| || ||||| ||||||||||| | |||||| ||||||||| Sbjct: 434 ccggcgcgccggtgtacctggcggccgtgctcgagtacctgacggccgagatcctggagc 493 Query: 310 tgg 312 ||| Sbjct: 494 tgg 496
>emb|X05863.1|MMHIS2BB Mouse H2B and H2A-pseudo histone genes (291B) Length = 1826 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 1085 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 1144 Query: 310 tgg 312 ||| Sbjct: 1145 tgg 1147
>emb|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) Length = 1797 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 1086 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 1145 Query: 310 tgg 312 ||| Sbjct: 1146 tgg 1148
>gb|BC099406.1| Mus musculus histone 1, H2ac, mRNA (cDNA clone MGC:117571 IMAGE:30789778), complete cds Length = 1075 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 147 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 206 Query: 310 tgg 312 ||| Sbjct: 207 tgg 209
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the Slc17a1 gene for solute carrier family 17 (vesicular glutamate transporter) member 1, two genes for novel solute carrier family 17 (Slc17) members, two novel genes, the gene for a novel C3HC4 type zinc finger (ring finger) protein, the gene for an H2a, an H2b, two genes for H3 and two genes for H4 histone family members, a H2a histone family pseudogene, the H1f1 and H1f2 genes for H1 histone family members 1 and 2, the H3f2 gene for H3 histone family, member 2 (H3.2), a novel pseudogene, the Hfe gene for hemochromatosis protein (Mr2) and two CpG islands, complete sequence Length = 186062 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 137109 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 137050 Query: 310 tgg 312 ||| Sbjct: 137049 tgg 137047
>emb|AJ494854.1|ODI494854 Oikopleura dioica partial mRNA for histone h2A.1b (H2a.1b gene) Length = 544 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 238 agcgagtcggctccggcgcccccgtctacctcgccgccgtcct 280 |||||||||| | ||||| || |||||||||||||||||||| Sbjct: 101 agcgagtcggagctggcgcaccagtctacctcgccgccgtcct 143
>dbj|AB226296.1| Aspergillus oryzae cDNA, contig sequence: AoEST3158 Length = 769 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 259 tacctcgccgctgtccttgagtatctcgccgccga 293
>dbj|AB223400.1| Aspergillus oryzae cDNA, contig sequence: AoEST0232 Length = 544 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 126 tacctcgccgctgtccttgagtatctcgccgccga 160
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 15210 tacctcgccgctgtccttgagtatctcgccgccga 15244
>dbj|AK146117.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730004H15 product:histone 1, H2ai, full insert sequence Length = 1396 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 149 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 208 Query: 310 tgg 312 ||| Sbjct: 209 tgg 211
>ref|NM_175660.2| Mus musculus histone 1, H2ab (Hist1h2ab), mRNA Length = 506 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 182 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 241 Query: 310 tgg 312 ||| Sbjct: 242 tgg 244
>gb|BC090402.1| Mus musculus cDNA clone MGC:103288 IMAGE:5150365, complete cds Length = 447 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 149 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 208 Query: 310 tgg 312 ||| Sbjct: 209 tgg 211
>gb|BC069947.1| Mus musculus cDNA clone IMAGE:6494016 Length = 2110 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 407 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 466 Query: 310 tgg 312 ||| Sbjct: 467 tgg 469
>gb|BC055904.1| Mus musculus cDNA clone IMAGE:4913108 Length = 2221 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 405 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 464 Query: 310 tgg 312 ||| Sbjct: 465 tgg 467
>ref|NM_178188.3| Mus musculus histone 1, H2ad (Hist1h2ad), mRNA Length = 393 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 137 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 196 Query: 310 tgg 312 ||| Sbjct: 197 tgg 199
>gb|U62669.1|MMU62669 Mus musculus histone H3.2-F (H3-F), histone H2a.1-F (H2a-F), histone H2b-F (H2b-F) genes, complete cds Length = 2822 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcctggagc 309 |||||||||| || ||||| || ||||| || |||||||| | |||||| ||||||||| Sbjct: 1692 ccggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagc 1633 Query: 310 tgg 312 ||| Sbjct: 1632 tgg 1630
>emb|AL116996.1|CNS01DM4 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 242 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 284
>emb|AL116730.1|CNS01DEQ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 235 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 277
>emb|AL116588.1|CNS01DAS Botrytis cinerea strain T4 cDNA library Length = 780 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 258 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 300
>emb|AL116474.1|CNS01D7M Botrytis cinerea strain T4 cDNA library Length = 696 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 113 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 155
>emb|AL116094.1|CNS01CX2 Botrytis cinerea strain T4 cDNA library Length = 756 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 246 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 288
>emb|AL115724.1|CNS01CMS Botrytis cinerea strain T4 cDNA library Length = 600 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 177 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 219
>emb|AL115329.1|CNS01CBT Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 258 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 300
>emb|AL115067.1|CNS01C4J Botrytis cinerea strain T4 cDNA library Length = 696 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 216 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 258
>emb|AL115020.1|CNS01C38 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 122 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 164
>emb|AL114627.1|CNS01BSB Botrytis cinerea strain T4 cDNA library Length = 710 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 228 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 270
>emb|AL114355.1|CNS01BKR Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 251 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 293
>emb|AL114111.1|CNS01BDZ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 248 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 290
>emb|AL113627.1|CNS01B0J Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 213 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 255
>emb|AL113553.1|CNS01AYH Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 256 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 298
>emb|AL113467.1|CNS01AW3 Botrytis cinerea strain T4 cDNA library Length = 636 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 170 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 212
>emb|AL113227.1|CNS01APF Botrytis cinerea strain T4 cDNA library Length = 636 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 247 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 289
>emb|AL112767.1|CNS01ACN Botrytis cinerea strain T4 cDNA library Length = 646 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 213 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 255
>emb|AL112265.1|CNS019YP Botrytis cinerea strain T4 cDNA library Length = 636 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 222 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 264
>emb|AL112443.1|CNS01A3N Botrytis cinerea strain T4 cDNA library Length = 636 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 188 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 230
>emb|AL110871.1|CNS018W0 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 235 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 277
>emb|AL110782.1|CNS018TJ Botrytis cinerea strain T4 cDNA library Length = 710 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 252 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 294
>emb|AL110738.1|CNS018SB Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 250 ccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 292 |||| ||||| ||||||||||| || || |||||||||||||| Sbjct: 253 ccggtgcccctgtctacctcgctgctgttctcgagtacctcgc 295
>emb|BX936232.1| Gallus gallus finished cDNA, clone ChEST960i13 Length = 647 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 231 tacctcgccgctgtccttgagtatctcgccgccga 265
>emb|BX935272.1| Gallus gallus finished cDNA, clone ChEST959a10 Length = 647 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 264 tacctcgccgccgtcctcgagtacctcgccgccga 298 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 231 tacctcgccgctgtccttgagtatctcgccgccga 265 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,037,178 Number of Sequences: 3902068 Number of extensions: 4037178 Number of successful extensions: 60274 Number of sequences better than 10.0: 400 Number of HSP's better than 10.0 without gapping: 412 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 58220 Number of HSP's gapped (non-prelim): 2054 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
