ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl11d09 |
|---|---|
| Clone Library Name | barley_pub |
>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 92.8 bits (229), Expect = 2e-19 Identities = 39/56 (69%), Positives = 52/56 (92%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+IKRK RS+RVKSVDLHPTEPW+LASLY+G++C+W+++TQT+VK+FEV +LPV Sbjct: 5 LDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDY 328 LE F S+ ++ + +HPT+P+IL S + +WD+ Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 92.8 bits (229), Expect = 2e-19 Identities = 39/56 (69%), Positives = 52/56 (92%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+IKRK RS+RVKSVDLHPTEPW+LASLY+G++C+W+++TQT+VK+FEV +LPV Sbjct: 4 LDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 59 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDY 328 LE F S+ ++ + +HPT+P+IL S + +WD+ Sbjct: 88 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 127
>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 92.8 bits (229), Expect = 2e-19 Identities = 39/56 (69%), Positives = 52/56 (92%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+IKRK RS+RVKSVDLHPTEPW+LASLY+G++C+W+++TQT+VK+FEV +LPV Sbjct: 4 LDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 59 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDY 328 LE F S+ ++ + +HPT+P+IL S + +WD+ Sbjct: 88 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 127
>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 904 Score = 90.5 bits (223), Expect = 9e-19 Identities = 38/56 (67%), Positives = 51/56 (91%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+IKRK S+RVKSVDLHPTEPW+LASLY+G++C+W+++TQT+VK+FEV +LPV Sbjct: 4 LDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 59 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDY 328 LE F S+ ++ + +HPT+P+IL S + +WD+ Sbjct: 88 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 127
>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 1000 Score = 81.6 bits (200), Expect = 4e-16 Identities = 35/56 (62%), Positives = 47/56 (83%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L++KRK RS+RVK VDLHP E W+LA+LY+G + IW+Y+TQT+VKSFEV ++PV Sbjct: 5 LDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPV 60 Score = 32.3 bits (72), Expect = 0.29 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQ-TMVKSFE 358 LE +F S+ ++S+ +HPT P++++S + +WD+ + M +SFE Sbjct: 89 LERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFE 139
>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 889 Score = 77.0 bits (188), Expect = 1e-14 Identities = 31/56 (55%), Positives = 45/56 (80%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+IK+ F+ RS+RVK +D HPTEPW+L +LYSG + +W+Y+TQ V+S +V+E PV Sbjct: 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPV 58 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/48 (25%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = +2 Query: 227 FAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQ-TMVKSFEVSE 367 F + ++S+ +HPT+P++L+ T+ +W+++ + ++FE E Sbjct: 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +2 Query: 269 PTEPWILASLYSGTLCIWDYQTQTMVKSFE 358 P +P+++ + T+ IWDYQT++ V + E Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLE 225 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 266 HPTEPWILASLYSGTLCIWDYQTQTMVKSFEV 361 HPT P I++ GTL IW+ T + K+ V Sbjct: 237 HPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268
>COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 796 Score = 76.3 bits (186), Expect = 2e-14 Identities = 29/56 (51%), Positives = 46/56 (82%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+ +RK +ERVK+VD HPTEPW++AS Y+G + IW+Y TQT+V+SF+++++P+ Sbjct: 4 LDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPI 59
>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 914 Score = 72.8 bits (177), Expect = 2e-13 Identities = 32/56 (57%), Positives = 43/56 (76%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 L+IKR+ RS+RVK VDLHP EPW+L +LY+G + I +Y+ Q MVK FEV ++PV Sbjct: 5 LDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPV 60 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQ 331 LE F S+ ++ + +HPT+P +L S + +W+++ Sbjct: 89 LEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| Length = 1201 Score = 55.8 bits (133), Expect = 2e-08 Identities = 22/56 (39%), Positives = 36/56 (64%) Frame = +2 Query: 209 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 +++ KF +S R K + HP+ PW+L +L+S T+ +WDY+ T++ FE E PV Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPV 56 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 239 SERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFE 358 + V SV HP + I++ TL +WD +T VK F+ Sbjct: 253 TNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFK 292
>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 55.1 bits (131), Expect = 4e-08 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = +2 Query: 224 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 KF +S RVK + HP PWIL SL++G + +WDY+ T++ F+ + PV Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 54 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +2 Query: 248 VKSVDLHPTEPWILASLYSGTLCIWDYQTQTMV 346 +++ H PWIL++ T+ +W++Q++T V Sbjct: 96 IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV 128
>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 55.1 bits (131), Expect = 4e-08 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = +2 Query: 224 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 KF +S RVK + HP PWIL SL++G + +WDY+ T++ F+ + PV Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 54 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +2 Query: 248 VKSVDLHPTEPWILASLYSGTLCIWDYQTQTMV 346 +++ H PWIL++ T+ +W++Q++T V Sbjct: 96 IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV 128
>COPA_CANFA (P40765) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] (Fragment) Length = 35 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = +2 Query: 224 KFAQRSERVKSVDLHPTEPWILASLYSGTL 313 KF +S RVK + HP PWIL SL++G + Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVI 33
>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143| Length = 1191 Score = 35.0 bits (79), Expect = 0.044 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = +2 Query: 233 QRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKS 352 QR E ++SV LHPT P + A G L +W++ T+++S Sbjct: 995 QRKEPIRSVSLHPTLPQLAAGDEQGNLTLWNFD-GTLIRS 1033
>KAD_METCA (Q606F1) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 214 Score = 31.6 bits (70), Expect = 0.49 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Frame = +1 Query: 205 QVGDQEEVRAAVGEGQVGGSAPHRAMDPGELVLGDSLHLGL-------PDADHGEIIRSF 363 Q+ + +RAAV EG G + MD G+LV DS+ LGL PD +G ++ F Sbjct: 28 QISTGDMLRAAVREGTPLGMEAKKIMDAGQLV-SDSIILGLIKERIAAPDCANGFLLDGF 86
>SKB15_SCHPO (O74453) Shk1 kinase-binding protein 15| Length = 341 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 Query: 212 EIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWD 325 +I +F +RVKSV +P + +++ + G++CIWD Sbjct: 230 KILHEFTAHKKRVKSV--YPVDDYLITASSDGSVCIWD 265
>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4| Length = 395 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 215 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSF 355 +K + + V P +ILAS + TL +WDYQ ++K + Sbjct: 267 VKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEY 313
>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III| Length = 902 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 212 EIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKS 352 +I R+ S R+ S D T W++ + GT+ WD T ++ S Sbjct: 563 KIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDS 609
>WDR23_MOUSE (Q91VU6) WD-repeat protein 23| Length = 549 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 215 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQ 331 I +K V+ V HP E I++S + G L +W Y+ Sbjct: 475 IVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYR 513
>WDR23_HUMAN (Q8TEB1) WD-repeat protein 23| Length = 546 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 215 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQ 331 I +K V+ V HP E I++S + G L +W Y+ Sbjct: 475 IVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYR 513
>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A| Length = 407 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/55 (23%), Positives = 26/55 (47%) Frame = +2 Query: 212 EIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 E + + V VD HP+ I A+ T+ +WD +T +++ +++ V Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A| Length = 407 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/55 (23%), Positives = 26/55 (47%) Frame = +2 Query: 212 EIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 E + + V VD HP+ I A+ T+ +WD +T +++ +++ V Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
>HAT2_YARLI (Q6C7Q4) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 452 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 Query: 239 SERVKSVDLHPTEPWILAS 295 S R+ D HPT PW++AS Sbjct: 403 SSRISDFDWHPTLPWVIAS 421
>YRIQ_CAEEL (P90794) Hypothetical WD-repeat protein D2030.9| Length = 571 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = +2 Query: 215 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDY 328 + R+ + V+ D HPTE I++S + G +W + Sbjct: 476 VSRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTW 513
>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A| Length = 405 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/55 (23%), Positives = 26/55 (47%) Frame = +2 Query: 212 EIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 E + + V VD HP+ I A+ T+ +WD +T +++ +++ V Sbjct: 178 ECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAV 232
>HIRA_MOUSE (Q61666) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1015 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 263 LHPTEPWILASLYSGTLCIWDYQTQTMV 346 LH T P+++A + TL +WD Q +V Sbjct: 778 LHCTGPYVMALTAAATLSVWDVHRQVVV 805
>ZNF16_HUMAN (P17020) Zinc finger protein 16 (Zinc finger protein KOX9)| Length = 682 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -1 Query: 347 SPWSASGSPRCRESPSTSSPGSMA 276 SPW+ + R R++P+ + PGS A Sbjct: 21 SPWTPAAQARVRDAPAVTHPGSAA 44
>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)| Length = 743 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/48 (25%), Positives = 22/48 (45%) Frame = +2 Query: 215 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFE 358 IK + + ++ + P + G + +WD Q QTMV+ F+ Sbjct: 539 IKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQ 586
>TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box protein 6)| Length = 540 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 Query: 247 GQVGGSAPHRAMDPGELVLGDSLHLGLP 330 G + S P +A PG+L+L LH+G P Sbjct: 317 GDIRDSDPEQAPTPGKLLLPQLLHVGAP 344
>DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein)| Length = 3027 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +2 Query: 218 KRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVSE 367 ++ F VK+V + PTE + + G + IW T ++ +F VSE Sbjct: 2921 RQLFQSHDSPVKAVAVDPTEEYFVTGSAEGNIKIWSLSTFGLLHTF-VSE 2969
>LE14B_PRUAR (O24467) LEC14B homolog| Length = 475 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/37 (27%), Positives = 19/37 (51%) Frame = +2 Query: 248 VKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFE 358 V+ HP P +++S + GT+ W++ V + E Sbjct: 428 VRDCSWHPLYPMLVSSSWDGTIARWEFPGDDQVPTLE 464
>YR154_MIMIV (Q5UPL6) Putative BTB/POZ domain and WD-repeat protein R154| Length = 468 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/31 (32%), Positives = 21/31 (67%) Frame = +2 Query: 284 ILASLYSGTLCIWDYQTQTMVKSFEVSELPV 376 IL ++G + IW+ + T+VKS ++ ++P+ Sbjct: 376 ILVGCHNGLMDIWNLKKLTLVKSTQLFDVPI 406
>DIP2_YEAST (Q12220) DOM34-interacting protein 2 (U3 small nucleolar| RNA-associated protein 12) (U3 snoRNA-associated protein 12) Length = 943 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/42 (33%), Positives = 28/42 (66%) Frame = +2 Query: 233 QRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFE 358 QR++ V+S+D+ +LA+ +G+L IW+ +T +++FE Sbjct: 390 QRTD-VRSIDISDDNK-LLATASNGSLKIWNIKTHKCIRTFE 429
>TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1| Length = 767 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/48 (22%), Positives = 22/48 (45%) Frame = +2 Query: 215 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFE 358 IK + + ++ + P + G + +WD Q QT+V+ F+ Sbjct: 563 IKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTLVRQFQ 610
>BOP1_MOUSE (P97452) Ribosome biogenesis protein BOP1 (Block of proliferation 1| protein) Length = 732 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 Query: 248 VKSVDLHPTEPWILASLYSGTL 313 V V HPT+PW+ +S GT+ Sbjct: 707 VLDVAFHPTQPWVFSSGADGTI 728
>VPS15_PICPA (Q9UVG6) Putative serine/threonine-protein kinase VPS15 (EC 2.7.11.1)| (Vacuolar protein sorting protein 15) Length = 1339 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = +2 Query: 248 VKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEV 361 + S DL ++ W+L G L +D + + +VKS+++ Sbjct: 1093 ITSFDLDSSQSWLLIGTSKGILDFYDLRFELLVKSWKL 1130
>WDR34_MOUSE (Q5U4F6) WD-repeat protein 34| Length = 535 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +2 Query: 248 VKSVDLHPTEP-WILASLYSGTLCIWD 325 V + HPT+P I LYSG + +WD Sbjct: 219 VMCLAFHPTQPSHIAGGLYSGEVLVWD 245
>RNP2_PYRFU (Q8U151) Ribonuclease P protein component 2 (EC 3.1.26.5) (RNase P| component 2) Length = 120 Score = 27.3 bits (59), Expect = 9.2 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 Query: 288 WRACTRGLSASGTTRRRPW 344 W AC R L GT + +PW Sbjct: 39 WNACLRTLGELGTAKAKPW 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,582,824 Number of Sequences: 219361 Number of extensions: 410038 Number of successful extensions: 2035 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1874 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2035 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
