ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 4e-96
2dbj|AK073748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 4e-96
3gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 206 4e-50
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.081
7emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.081
8ref|NM_196010.1| Oryza sativa (japonica cultivar-group) hypothet... 44 0.32
9emb|AL513189.13| Human DNA sequence from clone RP11-339I11 on ch... 44 0.32
10gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 geno... 44 0.32
11gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c... 44 0.32
12gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H0... 44 0.32
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
16dbj|AP005705.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
17dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
18gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
19ref|XM_465482.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
20gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
21gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
22gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
23emb|AL358793.14| Human DNA sequence from clone RP11-19M4 on chro... 42 1.3
24emb|BX883046.1| Rattus norvegicus chromosome 20, major histocomp... 42 1.3
25emb|AJ314857.1|RNO314857 Rattus norvegicus Nfkbil1 gene (partial... 42 1.3
26gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb002... 42 1.3
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
29dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
31dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
32ref|NM_125064.1| Arabidopsis thaliana unknown protein AT5G56810 ... 40 5.0
33gb|AF443599.1| Zea mays enhancer of polycomb-like protein (epc10... 40 5.0
34gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 5.0
35ref|XM_480765.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
36ref|NM_192216.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
37gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 5.0
38gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, compl... 40 5.0
39gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.0
40gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
41gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nippon... 40 5.0
42dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
45dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
46dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
47dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
48dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
49dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
50dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
51dbj|AP003799.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
52dbj|AB117723.1| Rhodococcus rhodochrous orf51, bphC5, orf52, orf... 40 5.0
53dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
54dbj|AB013392.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.0
55dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
56dbj|AK071243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
57dbj|AK068908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
58gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, comp... 40 5.0
59emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.0
60gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.0
61emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.0
62emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.0
63emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.0
64emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.0
65emb|AL157756.3|CNS01RG4 Human chromosome 14 DNA sequence BAC C-2... 40 5.0 
>dbj|AK102482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094L12, full
           insert sequence
          Length = 2770

 Score =  359 bits (181), Expect = 4e-96
 Identities = 268/297 (90%)
 Strand = Plus / Plus

                                                                       
Query: 81  atggccagcaagttcgggctcgccggcggaatcccggagcggcgggtgcggccgatctgg 140
           ||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 132 atggcaagcaagttcgggctcgccgggggcatcccggagaggcgggtgcggccgatctgg 191

                                                                       
Query: 141 gacgccgtcgactcgcgacagtacaaggccgcgctcaagctctgcacctcgctcctcgcc 200
           ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 192 gacgccgtcgactcgcgccagtacaaggctgcgctcaagctctgcaccgcgctcctcgcc 251

                                                                       
Query: 201 aagcaccccacctcaccctacgccctcgctctcaaggctcttactttggaaaggatggga 260
           |||||||| ||||| || |||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 252 aagcacccgacctccccttacgtcctcgctctcaagggtcttattttggaaaggatggga 311

                                                                       
Query: 261 aagcctgatgaagcactgactgtctgtttgaatgccaaggagctattgtactcgaataac 320
           ||||||||||||||||| | ||| |||||||||||||||||||  ||||| ||  | |||
Sbjct: 312 aagcctgatgaagcactcagtgtgtgtttgaatgccaaggagcagttgtattctgacaac 371

                                                                    
Query: 321 attttccattttgacgatctcacccttagcacactacagatagtgtttcaaaggctt 377
           || || |||||||| |||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 372 atctttcattttgatgatctcactcttagcaccctgcagatagtatttcaaaggctt 428



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 47 aaaccctaaccctagatcgtgaggg 71
          ||||||||||||||||||| |||||
Sbjct: 73 aaaccctaaccctagatcgcgaggg 97
to top
>dbj|AK073748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066L16, full
           insert sequence
          Length = 3317

 Score =  359 bits (181), Expect = 4e-96
 Identities = 268/297 (90%)
 Strand = Plus / Plus

                                                                       
Query: 81  atggccagcaagttcgggctcgccggcggaatcccggagcggcgggtgcggccgatctgg 140
           ||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 133 atggcaagcaagttcgggctcgccgggggcatcccggagaggcgggtgcggccgatctgg 192

                                                                       
Query: 141 gacgccgtcgactcgcgacagtacaaggccgcgctcaagctctgcacctcgctcctcgcc 200
           ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 193 gacgccgtcgactcgcgccagtacaaggctgcgctcaagctctgcaccgcgctcctcgcc 252

                                                                       
Query: 201 aagcaccccacctcaccctacgccctcgctctcaaggctcttactttggaaaggatggga 260
           |||||||| ||||| || |||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 253 aagcacccgacctccccttacgtcctcgctctcaagggtcttattttggaaaggatggga 312

                                                                       
Query: 261 aagcctgatgaagcactgactgtctgtttgaatgccaaggagctattgtactcgaataac 320
           ||||||||||||||||| | ||| |||||||||||||||||||  ||||| ||  | |||
Sbjct: 313 aagcctgatgaagcactcagtgtgtgtttgaatgccaaggagcagttgtattctgacaac 372

                                                                    
Query: 321 attttccattttgacgatctcacccttagcacactacagatagtgtttcaaaggctt 377
           || || |||||||| |||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 373 atctttcattttgatgatctcactcttagcaccctgcagatagtatttcaaaggctt 429



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 47 aaaccctaaccctagatcgtgaggg 71
          ||||||||||||||||||| |||||
Sbjct: 74 aaaccctaaccctagatcgcgaggg 98
to top
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score =  206 bits (104), Expect = 4e-50
 Identities = 137/148 (92%)
 Strand = Plus / Minus

                                                                         
Query: 81    atggccagcaagttcgggctcgccggcggaatcccggagcggcgggtgcggccgatctgg 140
             ||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 80568 atggcaagcaagttcgggctcgccgggggcatcccggagaggcgggtgcggccgatctgg 80509

                                                                         
Query: 141   gacgccgtcgactcgcgacagtacaaggccgcgctcaagctctgcacctcgctcctcgcc 200
             ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 80508 gacgccgtcgactcgcgccagtacaaggctgcgctcaagctctgcaccgcgctcctcgcc 80449

                                         
Query: 201   aagcaccccacctcaccctacgccctcg 228
             |||||||| ||||| || |||| |||||
Sbjct: 80448 aagcacccgacctccccttacgtcctcg 80421



 Score =  155 bits (78), Expect = 1e-34
 Identities = 132/150 (88%)
 Strand = Plus / Minus

                                                                         
Query: 228   gctctcaaggctcttactttggaaaggatgggaaagcctgatgaagcactgactgtctgt 287
             |||||||||| ||||| ||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 79077 gctctcaagggtcttattttggaaaggatgggaaagcctgatgaagcactcagtgtgtgt 79018

                                                                         
Query: 288   ttgaatgccaaggagctattgtactcgaataacattttccattttgacgatctcaccctt 347
             ||||||||||||||||  ||||| ||  | ||||| || |||||||| |||||||| |||
Sbjct: 79017 ttgaatgccaaggagcagttgtattctgacaacatctttcattttgatgatctcactctt 78958

                                           
Query: 348   agcacactacagatagtgtttcaaaggctt 377
             ||||| || |||||||| ||||||||||||
Sbjct: 78957 agcaccctgcagatagtatttcaaaggctt 78928



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 47    aaaccctaaccctagatcgtgaggg 71
             ||||||||||||||||||| |||||
Sbjct: 80627 aaaccctaaccctagatcgcgaggg 80603
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  206 bits (104), Expect = 4e-50
 Identities = 137/148 (92%)
 Strand = Plus / Minus

                                                                            
Query: 81       atggccagcaagttcgggctcgccggcggaatcccggagcggcgggtgcggccgatctgg 140
                ||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 16129398 atggcaagcaagttcgggctcgccgggggcatcccggagaggcgggtgcggccgatctgg 16129339

                                                                            
Query: 141      gacgccgtcgactcgcgacagtacaaggccgcgctcaagctctgcacctcgctcctcgcc 200
                ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 16129338 gacgccgtcgactcgcgccagtacaaggctgcgctcaagctctgcaccgcgctcctcgcc 16129279

                                            
Query: 201      aagcaccccacctcaccctacgccctcg 228
                |||||||| ||||| || |||| |||||
Sbjct: 16129278 aagcacccgacctccccttacgtcctcg 16129251



 Score =  155 bits (78), Expect = 1e-34
 Identities = 132/150 (88%)
 Strand = Plus / Minus

                                                                            
Query: 228      gctctcaaggctcttactttggaaaggatgggaaagcctgatgaagcactgactgtctgt 287
                |||||||||| ||||| ||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 16127907 gctctcaagggtcttattttggaaaggatgggaaagcctgatgaagcactcagtgtgtgt 16127848

                                                                            
Query: 288      ttgaatgccaaggagctattgtactcgaataacattttccattttgacgatctcaccctt 347
                ||||||||||||||||  ||||| ||  | ||||| || |||||||| |||||||| |||
Sbjct: 16127847 ttgaatgccaaggagcagttgtattctgacaacatctttcattttgatgatctcactctt 16127788

                                              
Query: 348      agcacactacagatagtgtttcaaaggctt 377
                ||||| || |||||||| ||||||||||||
Sbjct: 16127787 agcaccctgcagatagtatttcaaaggctt 16127758



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 45       caaaaccctaaccctagatcg 65
                |||||||||||||||||||||
Sbjct: 19245924 caaaaccctaaccctagatcg 19245904



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 47       aaaccctaaccctagatcgtgaggg 71
                ||||||||||||||||||| |||||
Sbjct: 16129457 aaaccctaaccctagatcgcgaggg 16129433



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 45      caaaaccctaaccctagatcg 65
               |||||||||||||||||||||
Sbjct: 7877301 caaaaccctaaccctagatcg 7877321
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 45       caaaaccctaaccctagatcgtg 67
                |||||||||||||||||||||||
Sbjct: 15354749 caaaaccctaaccctagatcgtg 15354771



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        cccttcttcctcctcccgct 20
                ||||||||||||||||||||
Sbjct: 25195416 cccttcttcctcctcccgct 25195435



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 37       ccgccgctcaaaaccctaacccta 60
                ||||||| ||||||||||||||||
Sbjct: 18923218 ccgccgcccaaaaccctaacccta 18923195
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 45       caaaaccctaaccctagatcgtg 67
                |||||||||||||||||||||||
Sbjct: 15309032 caaaaccctaaccctagatcgtg 15309054



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        cccttcttcctcctcccgct 20
                ||||||||||||||||||||
Sbjct: 25123592 cccttcttcctcctcccgct 25123611



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 37       ccgccgctcaaaaccctaacccta 60
                ||||||| ||||||||||||||||
Sbjct: 18849445 ccgccgcccaaaaccctaacccta 18849422
to top
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151541

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 45     caaaaccctaaccctagatcgtg 67
              |||||||||||||||||||||||
Sbjct: 130142 caaaaccctaaccctagatcgtg 130164
to top
>ref|NM_196010.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0076H04.16), mRNA
          Length = 582

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 2   ccttcttcctcctcccgctctc 23
           ||||||||||||||||||||||
Sbjct: 564 ccttcttcctcctcccgctctc 543
to top
>emb|AL513189.13| Human DNA sequence from clone RP11-339I11 on chromosome 1 Contains part
             of a novel gene, complete sequence
          Length = 59522

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 251   aaggatgggaaagcctgatgaa 272
             ||||||||||||||||||||||
Sbjct: 37768 aaggatgggaaagcctgatgaa 37747
to top
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete
             sequence
          Length = 141050

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2     ccttcttcctcctcccgctctc 23
             ||||||||||||||||||||||
Sbjct: 70064 ccttcttcctcctcccgctctc 70085
to top
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2      ccttcttcctcctcccgctctc 23
              ||||||||||||||||||||||
Sbjct: 129365 ccttcttcctcctcccgctctc 129344
to top
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence
          Length = 161873

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2     ccttcttcctcctcccgctctc 23
             ||||||||||||||||||||||
Sbjct: 41571 ccttcttcctcctcccgctctc 41550
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 2        ccttcttcctcctcccgctctc 23
                ||||||||||||||||||||||
Sbjct: 27402644 ccttcttcctcctcccgctctc 27402623
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 2        ccttcttcctcctcccgctctc 23
                ||||||||||||||||||||||
Sbjct: 10488897 ccttcttcctcctcccgctctc 10488876



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       caaaaccctaaccctagatc 64
                ||||||||||||||||||||
Sbjct: 14584034 caaaaccctaaccctagatc 14584053



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      caaaaccctaaccctagatc 64
               ||||||||||||||||||||
Sbjct: 4094726 caaaaccctaaccctagatc 4094707
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 2       ccttcttcctcctcccgctctc 23
               ||||||||||||||||||||||
Sbjct: 6472229 ccttcttcctcctcccgctctc 6472250



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 2       ccttcttcctcctcccgctctc 23
               ||||||||||||||||||||||
Sbjct: 6388089 ccttcttcctcctcccgctctc 6388110



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 45       caaaaccctaaccctagatcg 65
                |||||||||||||||||||||
Sbjct: 16064230 caaaaccctaaccctagatcg 16064210



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      caaaaccctaaccctagatc 64
               ||||||||||||||||||||
Sbjct: 2502327 caaaaccctaaccctagatc 2502346
to top
>dbj|AP005705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0453B09
          Length = 173688

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2      ccttcttcctcctcccgctctc 23
              ||||||||||||||||||||||
Sbjct: 138306 ccttcttcctcctcccgctctc 138327



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2     ccttcttcctcctcccgctctc 23
             ||||||||||||||||||||||
Sbjct: 54166 ccttcttcctcctcccgctctc 54187
to top
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0663H05
          Length = 161938

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2      ccttcttcctcctcccgctctc 23
              ||||||||||||||||||||||
Sbjct: 120368 ccttcttcctcctcccgctctc 120389
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 2        ccttcttcctcctcccgctctc 23
                ||||||||||||||||||||||
Sbjct: 10494936 ccttcttcctcctcccgctctc 10494915



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       caaaaccctaaccctagatc 64
                ||||||||||||||||||||
Sbjct: 14592275 caaaaccctaaccctagatc 14592294



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      caaaaccctaaccctagatc 64
               ||||||||||||||||||||
Sbjct: 4095547 caaaaccctaaccctagatc 4095528
to top
>ref|XM_465482.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1050

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 45   caaaaccctaaccctagatcg 65
            |||||||||||||||||||||
Sbjct: 1015 caaaaccctaaccctagatcg 1035
to top
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 49999 caaaaccctaaccctagatcg 49979
to top
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0042F15, complete sequence
          Length = 162959

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 62076 caaaaccctaaccctagatcg 62096
to top
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone
             OSJNBb0026K11, complete sequence
          Length = 129643

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 26104 caaaaccctaaccctagatcg 26084
to top
>emb|AL358793.14| Human DNA sequence from clone RP11-19M4 on chromosome 1, complete
            sequence
          Length = 92434

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 232  tcaaggctcttactttggaaa 252
            |||||||||||||||||||||
Sbjct: 8258 tcaaggctcttactttggaaa 8278
to top
>emb|BX883046.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
             assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
             RT1n haplotype; segment 5/11
          Length = 349047

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   gccaagcaccccacctcaccc 218
             |||||||||||||||||||||
Sbjct: 94280 gccaagcaccccacctcaccc 94300
to top
>emb|AJ314857.1|RNO314857 Rattus norvegicus Nfkbil1 gene (partial), Atp6G, Bat1, RT1-C/E1,
             RT1-C/E2, RT1-C/E3, RT1-C/E4, RT1-C/E5, RT1-C/E7 genes and
             RT1-C/E6, RT1-C/E8, RT1-C/E9 pseudogenes
          Length = 198911

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   gccaagcaccccacctcaccc 218
             |||||||||||||||||||||
Sbjct: 12096 gccaagcaccccacctcaccc 12116
to top
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence
          Length = 129838

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 35381 caaaaccctaaccctagatcg 35401
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 45       caaaaccctaaccctagatcg 65
                |||||||||||||||||||||
Sbjct: 25053772 caaaaccctaaccctagatcg 25053752
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 45       caaaaccctaaccctagatcg 65
                |||||||||||||||||||||
Sbjct: 15499570 caaaaccctaaccctagatcg 15499550



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 45       caaaaccctaaccctagatc 64
                ||||||||||||||||||||
Sbjct: 10654513 caaaaccctaaccctagatc 10654494
to top
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1328_D07
          Length = 155007

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 64443 caaaaccctaaccctagatcg 64423
to top
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0018L13
          Length = 131155

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 94452 caaaaccctaaccctagatcg 94432
to top
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0644G05
          Length = 143119

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    caaaaccctaaccctagatcg 65
             |||||||||||||||||||||
Sbjct: 27130 caaaaccctaaccctagatcg 27110
to top
>ref|NM_125064.1| Arabidopsis thaliana unknown protein AT5G56810 mRNA, complete cds
          Length = 1308

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  ctcaaaaccctaaccctaga 62
           ||||||||||||||||||||
Sbjct: 262 ctcaaaaccctaaccctaga 281
to top
>gb|AF443599.1| Zea mays enhancer of polycomb-like protein (epc101) mRNA, complete
           cds
          Length = 1897

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  gctcaaaaccctaaccctag 61
           ||||||||||||||||||||
Sbjct: 103 gctcaaaaccctaaccctag 122
to top
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 315     aataacattttccattttga 334
               ||||||||||||||||||||
Sbjct: 1233245 aataacattttccattttga 1233264
to top
>ref|XM_480765.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 4   ttcttcctcctcccgctctc 23
           ||||||||||||||||||||
Sbjct: 82  ttcttcctcctcccgctctc 101
to top
>ref|NM_192216.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 672

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   cccttcttcctcctcccgct 20
           ||||||||||||||||||||
Sbjct: 170 cccttcttcctcctcccgct 151
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    atcccggagcggcgggtgcggccg 134
              |||||||| |||||||||||||||
Sbjct: 207474 atcccggatcggcgggtgcggccg 207497
to top
>gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, complete sequence
          Length = 207515

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    actgactgtctgtttgaatg 294
              ||||||||||||||||||||
Sbjct: 175682 actgactgtctgtttgaatg 175701
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ggagcggcgggtgcggccga 135
              ||||||||||||||||||||
Sbjct: 233499 ggagcggcgggtgcggccga 233480
to top
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12,
             complete sequence
          Length = 149347

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    caaaaccctaaccctagatc 64
             ||||||||||||||||||||
Sbjct: 56496 caaaaccctaaccctagatc 56515
to top
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0089D15, from Chromosome 10, complete sequence
          Length = 164679

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    caaaaccctaaccctagatc 64
             ||||||||||||||||||||
Sbjct: 91555 caaaaccctaaccctagatc 91536
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       caaaaccctaaccctagatc 64
                ||||||||||||||||||||
Sbjct: 19902409 caaaaccctaaccctagatc 19902428



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       ttcttcctcctcccgctctc 23
               ||||||||||||||||||||
Sbjct: 7583808 ttcttcctcctcccgctctc 7583789



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 44      tcaaaaccctaaccctagat 63
               ||||||||||||||||||||
Sbjct: 7505120 tcaaaaccctaaccctagat 7505139
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        cccttcttcctcctcccgct 20
                ||||||||||||||||||||
Sbjct: 17127316 cccttcttcctcctcccgct 17127335



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      caaaaccctaaccctagatc 64
               ||||||||||||||||||||
Sbjct: 8363995 caaaaccctaaccctagatc 8363976
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        cccttcttcctcctcccgct 20
                ||||||||||||||||||||
Sbjct: 29094077 cccttcttcctcctcccgct 29094058
to top
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0047E11
          Length = 148109

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cccttcttcctcctcccgct 20
              ||||||||||||||||||||
Sbjct: 138435 cccttcttcctcctcccgct 138416
to top
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0421H07
          Length = 158126

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     cccttcttcctcctcccgct 20
             ||||||||||||||||||||
Sbjct: 54443 cccttcttcctcctcccgct 54424
to top
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    caaaaccctaaccctagatc 64
             ||||||||||||||||||||
Sbjct: 70587 caaaaccctaaccctagatc 70606
to top
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    caaaaccctaaccctagatc 64
             ||||||||||||||||||||
Sbjct: 88917 caaaaccctaaccctagatc 88936
to top
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1089G05
          Length = 161420

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      cccttcttcctcctcccgct 20
              ||||||||||||||||||||
Sbjct: 128168 cccttcttcctcctcccgct 128187
to top
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0603C10
          Length = 187620

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     caaaaccctaaccctagatc 64
              ||||||||||||||||||||
Sbjct: 157500 caaaaccctaaccctagatc 157481
to top
>dbj|AP003799.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1006_H01
          Length = 113769

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ttcttcctcctcccgctctc 23
              ||||||||||||||||||||
Sbjct: 110889 ttcttcctcctcccgctctc 110870



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tcaaaaccctaaccctagat 63
             ||||||||||||||||||||
Sbjct: 32201 tcaaaaccctaaccctagat 32220
to top
>dbj|AB117723.1| Rhodococcus rhodochrous orf51, bphC5, orf52, orf53, orf54, orf55,
            orf56 genes for hypothetical proteins and 2,
            3-dihydroxybiphenyl 1, 2-dioxygenase, partial and
            complete cds
          Length = 5810

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gctcgccggcggaatcccgg 117
            ||||||||||||||||||||
Sbjct: 3044 gctcgccggcggaatcccgg 3063
to top
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0018M09
          Length = 157377

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    caaaaccctaaccctagatc 64
             ||||||||||||||||||||
Sbjct: 72203 caaaaccctaaccctagatc 72184
to top
>dbj|AB013392.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIK19
          Length = 84129

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ctcaaaaccctaaccctaga 62
             ||||||||||||||||||||
Sbjct: 72986 ctcaaaaccctaaccctaga 73005
to top
>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0494D11
          Length = 149198

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    ttcttcctcctcccgctctc 23
            ||||||||||||||||||||
Sbjct: 9003 ttcttcctcctcccgctctc 8984
to top
>dbj|AK071243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087F24,
          full insert sequence
          Length = 1121

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 37 ccgccgctcaaaaccctaacccta 60
          ||||||| ||||||||||||||||
Sbjct: 27 ccgccgcccaaaaccctaacccta 50
to top
>dbj|AK068908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C02,
          full insert sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 37 ccgccgctcaaaaccctaacccta 60
          ||||||| ||||||||||||||||
Sbjct: 57 ccgccgcccaaaaccctaacccta 80
to top
>gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, complete sequence
          Length = 155366

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   actgactgtctgtttgaatg 294
             ||||||||||||||||||||
Sbjct: 76672 actgactgtctgtttgaatg 76691
to top
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete
             sequence
          Length = 121821

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     cccttcttcctcctcccgct 20
             ||||||||||||||||||||
Sbjct: 32471 cccttcttcctcctcccgct 32452
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     gtacaaggccgcgctcaagc 180
               ||||||||||||||||||||
Sbjct: 2940294 gtacaaggccgcgctcaagc 2940275
to top
>emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa0001B02 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 93872

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    cccttcttcctcctcccgct 20
            ||||||||||||||||||||
Sbjct: 5647 cccttcttcctcctcccgct 5628
to top
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    ccgccgctcaaaaccctaacccta 60
             ||||||| ||||||||||||||||
Sbjct: 47161 ccgccgcccaaaaccctaacccta 47184
to top
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158927

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cccttcttcctcctcccgct 20
              ||||||||||||||||||||
Sbjct: 141774 cccttcttcctcctcccgct 141755
to top
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    ccgccgctcaaaaccctaacccta 60
             ||||||| ||||||||||||||||
Sbjct: 19335 ccgccgcccaaaaccctaacccta 19312
to top
>emb|AL157756.3|CNS01RG4 Human chromosome 14 DNA sequence BAC C-2184C24 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 127544

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   gggaaagcctgatgaagcac 276
             ||||||||||||||||||||
Sbjct: 10823 gggaaagcctgatgaagcac 10842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,195,722
Number of Sequences: 3902068
Number of extensions: 3195722
Number of successful extensions: 86423
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84763
Number of HSP's gapped (non-prelim): 1660
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top