Clone Name | bastl11b12 |
---|---|
Clone Library Name | barley_pub |
>emb|CR678358.2|CNS0FMDK Tetraodon nigroviridis full-length cDNA Length = 1104 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 313 atgtctctgctgctgcgccgt 333
>emb|CR676869.1|CNS0FL8H Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 718 atgtctctgctgctgcgccgt 738
>emb|CR671056.2|CNS0FGRA Tetraodon nigroviridis full-length cDNA Length = 1144 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 339 atgtctctgctgctgcgccgt 359
>emb|CR663391.2|CNS0FAUD Tetraodon nigroviridis full-length cDNA Length = 1343 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 724 atgtctctgctgctgcgccgt 744
>emb|CR649008.2|CNS0EZQU Tetraodon nigroviridis full-length cDNA Length = 1503 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 940 atgtctctgctgctgcgccgt 960
>emb|CR648727.2|CNS0EZJ1 Tetraodon nigroviridis full-length cDNA Length = 1448 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 636 atgtctctgctgctgcgccgt 656
>emb|CR642216.2|CNS0EUI6 Tetraodon nigroviridis full-length cDNA Length = 1270 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 atgtctctgctgctgcgccgt 67 ||||||||||||||||||||| Sbjct: 778 atgtctctgctgctgcgccgt 798
>ref|XM_470851.1| Oryza sativa (japonica cultivar-group), mRNA Length = 414 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tgtctctgctgctgcgccg 66 ||||||||||||||||||| Sbjct: 140 tgtctctgctgctgcgccg 122
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tgtctctgctgctgcgccg 66 ||||||||||||||||||| Sbjct: 1803 tgtctctgctgctgcgccg 1785
>gb|AC117657.11| Mus musculus chromosome 15, clone RP23-299O23, complete sequence Length = 198005 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 tctcatgtctctgctgctg 61 ||||||||||||||||||| Sbjct: 146161 tctcatgtctctgctgctg 146179
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tgtctctgctgctgcgccg 66 ||||||||||||||||||| Sbjct: 15740003 tgtctctgctgctgcgccg 15739985
>gb|AC068467.7| Homo sapiens chromosome 8, clone RP11-643F5, complete sequence Length = 185895 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 ctcatgtctctgctgctgc 62 ||||||||||||||||||| Sbjct: 22625 ctcatgtctctgctgctgc 22607
>emb|AJ457974.1|CFA457974 Canis familiaris partial pax3 gene for paired-box 3 protein, exons 1-4 Length = 5820 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cccccggggactccgcgcc 25 ||||||||||||||||||| Sbjct: 170 cccccggggactccgcgcc 152
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tgtctctgctgctgcgccg 66 ||||||||||||||||||| Sbjct: 149957 tgtctctgctgctgcgccg 149939
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tgtctctgctgctgcgccg 66 ||||||||||||||||||| Sbjct: 15734537 tgtctctgctgctgcgccg 15734519
>emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chromosome 4, complete sequence Length = 200368 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 gggaatctcatgtctctgc 56 ||||||||||||||||||| Sbjct: 133948 gggaatctcatgtctctgc 133966 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 563,889 Number of Sequences: 3902068 Number of extensions: 563889 Number of successful extensions: 41348 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41321 Number of HSP's gapped (non-prelim): 27 length of query: 69 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 48 effective length of database: 17,151,101,840 effective search space: 823252888320 effective search space used: 823252888320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)