ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor 29 3.6
2LNT_RICPR (Q9ZDG3) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 28 4.7
3ATG9_ASHGO (Q75A48) Autophagy-related protein 9 28 6.2
4GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3... 28 8.1
5CT111_MOUSE (Q9D722) Protein C20orf111 homolog 28 8.1

>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor|
          Length = 639

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 8   HPKLKQDESFC*RSFPFPR-*DPHSTKEHGNSYSNECRC*QC*HGG 142
           H + ++DE    R FPFPR   PH  +EH     +E    +  HGG
Sbjct: 89  HGEKEEDEGEQPRPFPFPRPRQPHQEEEHEQKEEHEWHRKEEKHGG 134



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>LNT_RICPR (Q9ZDG3) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 496

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = -2

Query: 250 LLEPFLEITAAYW*GIVFSIPDSETSALTLLTTDPSTSMLALLAPAFIAIGVAMFFGTVR 71
           L++P L IT  Y  G+ F +    TSA  + T    T +  LLA + + + V + +G VR
Sbjct: 149 LIQP-LSITGIY--GLSFIVIYISTSAYPVFTKK-FTQLKILLASSMLILTVMVIYGAVR 204

Query: 70  ISS 62
           +S+
Sbjct: 205 VST 207



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>ATG9_ASHGO (Q75A48) Autophagy-related protein 9|
          Length = 897

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +1

Query: 49  IPIPQMRSSQYQRT--WXXXXXXXXXXXXXAWRLMDQLLTMSMQRFLNQGLKKRFLTSML 222
           +PIP  R+S   +T  W             A  L    L  + + FL++ LKKRF+ +  
Sbjct: 419 LPIPLYRTSTLTKTLEWNIHLCIIGFAFNEAGFLKQSFLNPAQREFLSEELKKRFILAGF 478

Query: 223 L 225
           L
Sbjct: 479 L 479



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>GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 172 ALTLLTTDPSTSMLALLAPAFIAIGVAMFFGTVRISSGEW 53
           A  LLT   + SM  + APA++++GV M + T+ IS   W
Sbjct: 551 AANLLTGLVNVSMKTMYAPAWLSMGVLMLY-TLTISCVGW 589



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>CT111_MOUSE (Q9D722) Protein C20orf111 homolog|
          Length = 291

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 12  PSSSRMKVSANDHSHSPDEILTVPKNMATPIAMNAGANSASMEVD 146
           PSSS++K      +  PD I    + ++TP   NAG NS S++V+
Sbjct: 101 PSSSQLK--HRSQTEPPDGISG--RGISTPKEFNAGENSTSLDVN 141


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,477,595
Number of Sequences: 219361
Number of extensions: 536304
Number of successful extensions: 1242
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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