ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.... 28 8.2

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
 Frame = +1

Query: 1    LISFPPHHHIARVSD----FVDRKKASLRP-------SELELGLLSLAVASSK 126
            LIS PPHH I  + D      D K A+ R        SE+ +G+++  VA +K
Sbjct: 1055 LISPPPHHDIYSIEDLKQLIYDMKSANPRARVSVKLVSEVGVGIVASGVAKAK 1107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,381,860
Number of Sequences: 219361
Number of extensions: 560948
Number of successful extensions: 1911
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top