>ref|XM_467437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3793

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 176 cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 235
           ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 238 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 297

                     
Query: 236 gcgtcacggc 245
            |||||||||
Sbjct: 298 ccgtcacggc 307



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  ccccatcatcacatcgcccgcgtgag 41
           ||||| ||||||||||||||||||||
Sbjct: 119 ccccaccatcacatcgcccgcgtgag 144

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                            
Query: 176      cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 235
                ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 29513959 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 29513900

                          
Query: 236      gcgtcacggc 245
                 |||||||||
Sbjct: 29513899 ccgtcacggc 29513890



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 16       ccccatcatcacatcgcccgcgtgag 41
                ||||| ||||||||||||||||||||
Sbjct: 29514078 ccccaccatcacatcgcccgcgtgag 29514053

>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1038_A06
          Length = 147836

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                          
Query: 176    cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 235
              ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 108989 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 108930

                        
Query: 236    gcgtcacggc 245
               |||||||||
Sbjct: 108929 ccgtcacggc 108920



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 16     ccccatcatcacatcgcccgcgtgag 41
              ||||| ||||||||||||||||||||
Sbjct: 109108 ccccaccatcacatcgcccgcgtgag 109083

>dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I02, full
           insert sequence
          Length = 3793

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 176 cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 235
           ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 238 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 297

                     
Query: 236 gcgtcacggc 245
            |||||||||
Sbjct: 298 ccgtcacggc 307



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  ccccatcatcacatcgcccgcgtgag 41
           ||||| ||||||||||||||||||||
Sbjct: 119 ccccaccatcacatcgcccgcgtgag 144

>ref|XM_743362.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g01340)
           partial mRNA
          Length = 441

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 208 ggggagctggcgatggagatc 228
           |||||||||||||||||||||
Sbjct: 343 ggggagctggcgatggagatc 363

>gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.1171_I_10, complete sequence
          Length = 175120

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     tcattcccaccccatcatcac 27
             |||||||||||||||||||||
Sbjct: 93971 tcattcccaccccatcatcac 93951

>ref|NM_187895.1| Oryza sativa (japonica cultivar-group), Ozsa8337 predicted mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ggaggtcggcggggagctgg 217
           ||||||||||||||||||||
Sbjct: 45  ggaggtcggcggggagctgg 64

>ref|XM_463372.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 ggaggaggtcggcggggagc 214
           ||||||||||||||||||||
Sbjct: 604 ggaggaggtcggcggggagc 585

>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  ctctaaaccctagcggcatc 139
            ||||||||||||||||||||
Sbjct: 6518 ctctaaaccctagcggcatc 6537

>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ggaggtcggcggggagctgg 217
             ||||||||||||||||||||
Sbjct: 46047 ggaggtcggcggggagctgg 46028

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      ggaggaggtcggcggggagc 214
                ||||||||||||||||||||
Sbjct: 23405412 ggaggaggtcggcggggagc 23405393



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 198     ggaggtcggcggggagctgg 217
               ||||||||||||||||||||
Sbjct: 8470894 ggaggtcggcggggagctgg 8470875

>gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 of the complete
            genome
          Length = 11578

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  tcggcggggagctggcgatg 222
            ||||||||||||||||||||
Sbjct: 9444 tcggcggggagctggcgatg 9463

>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ggaggtcggcggggagctgg 217
             ||||||||||||||||||||
Sbjct: 85849 ggaggtcggcggggagctgg 85830

>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1103C09
          Length = 163996

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    ggaggaggtcggcggggagc 214
              ||||||||||||||||||||
Sbjct: 131110 ggaggaggtcggcggggagc 131091

>dbj|AK107371.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B04, full
           insert sequence
          Length = 1894

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 ggaggaggtcggcggggagc 214
           ||||||||||||||||||||
Sbjct: 679 ggaggaggtcggcggggagc 660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,706,003
Number of Sequences: 3902068
Number of extensions: 1706003
Number of successful extensions: 33042
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32929
Number of HSP's gapped (non-prelim): 113
length of query: 245
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 223
effective length of database: 17,147,199,772
effective search space: 3823825549156
effective search space used: 3823825549156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)