ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 192 3e-49
2LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 108 6e-24
3LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 103 3e-22
4LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 101 1e-21
5LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 95 1e-19
6LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 89 5e-18
7LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 88 1e-17
8LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 82 8e-16
9LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 78 1e-14
10LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 73 5e-13
11LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 70 2e-12
12LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 69 9e-12
13LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 65 1e-10
14LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 63 5e-10
15LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 59 9e-09
16LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 57 2e-08
17LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 57 3e-08
18LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 54 2e-07
19ZBT24_RAT (Q3B725) Zinc finger and BTB domain-containing protein... 31 2.1
20ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protei... 30 2.7
21ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SC... 30 3.5
22TRUA_GEOKA (Q5L3Q7) tRNA pseudouridine synthase A (EC 5.4.99.12)... 30 4.6
23ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 pro... 29 6.0
24GPDA_STAHJ (Q4L6H9) Glycerol-3-phosphate dehydrogenase [NAD(P)+]... 29 6.0
25U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein ... 29 7.8
26FLAD_CAUCR (P12634) Distal basal body ring component protein pre... 29 7.8

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score =  192 bits (489), Expect = 3e-49
 Identities = 93/119 (78%), Positives = 104/119 (87%)
 Frame = +2

Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSF 310
           M + G  DRLTG+NKEAWKEG+IRGTAVLVK DVL LGDFHASLLDGVH IL   +GV+F
Sbjct: 1   MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60

Query: 311 RLVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIV 487
           RLVSATA DP NG +GK+GKPAHLEE+VVTMKSTAA ESVF+V FEWDESQG+PGAV+V
Sbjct: 61  RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWDESQGIPGAVVV 119



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score =  108 bits (271), Expect = 6e-24
 Identities = 58/120 (48%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
 Frame = +2

Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSF 310
           MLL GL+D LTG NK A    +++GT VL++ +VLDL DF A+++DG+ + L K  GV+ 
Sbjct: 1   MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGK--GVTC 54

Query: 311 RLVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWD-ESQGVPGAVIV 487
           +L+S+TA D  NG +GKVG  A LE+ V ++ S    ES F +TF+W+ E  GVPGA++V
Sbjct: 55  QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 114



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score =  103 bits (256), Expect = 3e-22
 Identities = 54/115 (46%), Positives = 76/115 (66%)
 Frame = +2

Query: 146 LVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFRLVSA 325
           L D LTG   E   + K++GT VL+K +VLD  DF+AS LD +H+ L     ++ RLVS+
Sbjct: 5   LRDLLTGGGNETTTK-KVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNK--ITLRLVSS 61

Query: 326 TAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
              D +NGS+GK+GK AHLE+ + T+ S  A ES FKVTF+++   G PGA ++R
Sbjct: 62  DVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIR 116



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score =  101 bits (252), Expect = 1e-21
 Identities = 54/121 (44%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFR 313
           +L G++D +TG +K++    +++GT VL++ +VLDL DF A+++DG+ + L K  GV+ +
Sbjct: 1   MLGGIIDTITGSSKQS----RLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGK--GVTCQ 54

Query: 314 LVSATAPDPQNGSQGKVGKPAHLEE-VVVTMKSTAAXESVFKVTFEWD-ESQGVPGAVIV 487
           L+S+TA DP NG++GKVG  A LE+ +  ++ S    ES F VTF+WD +  GVPGA+IV
Sbjct: 55  LISSTAVDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIV 114

Query: 488 R 490
           +
Sbjct: 115 K 115



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 48/120 (40%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFR 313
           +L G++  LTG      K  +++G+ VL++ + LD+ DF A+++DG+ + L +  GV+ +
Sbjct: 1   MLGGIIGGLTGN-----KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGR--GVTCQ 53

Query: 314 LVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWD-ESQGVPGAVIVR 490
           LVS++  DP NG++G+VG  A LE+ + ++ S    ES F VTFEW+ E  G+PGA+IV+
Sbjct: 54  LVSSSLVDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVK 113



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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 48/119 (40%), Positives = 73/119 (61%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFR 313
           +L  LV  L G + ++    K++GT V++K + LD  D   SL D + + L +   VSF+
Sbjct: 1   MLGQLVGGLIGGHHDS---KKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQK--VSFQ 55

Query: 314 LVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
           L+S+   DP NG QGK   PA+LE  ++T+   AA E+ F VTF+W+E  GVPGA +++
Sbjct: 56  LISSVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWNEEFGVPGAFVIK 114



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFR 313
           +L GL D+LTGKN       KI+G AVL+   +LD  DF ASLLD VH++    + ++ +
Sbjct: 1   MLGGLKDKLTGKNGN-----KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFG--NSITCQ 53

Query: 314 LVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWD-ESQGVPGAVIVR 490
           LVSAT  D  N  +G VG  A+LE+ +  + S +  ES   V F W+ +  GVPGA+I++
Sbjct: 54  LVSATVADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIK 113



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFRLVSATAPDPQNGSQGKVGKP 373
           K++GT V++  +VLD  D   SL   +  +L +   VSF+L+S+   DP NG QGK   P
Sbjct: 18  KVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQK--VSFQLISSVQGDPTNGLQGKHSNP 75

Query: 374 AHLEEVVVTMKS-TAAXESVFKVTFEWDESQGVPGAVIVR 490
           A+LE  + T+   TA  E+ F VTF+W+E  GVPGA I++
Sbjct: 76  AYLENSLFTLTPLTAGSETAFGVTFDWNEEFGVPGAFIIK 115



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = +2

Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSF 310
           M L G+VD + GK+       K++G  +L+K +VLD  +  AS++DG+  +L +   VS 
Sbjct: 1   MSLGGIVDAILGKDDRP----KVKGRVILMKKNVLDFINIGASVVDGISDLLGQK--VSI 54

Query: 311 RLVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQ-GVPGAVIV 487
           +L+S +     +G +GK+  PA+LE  +  +    A ES F VTF+WD  + GVPGA I+
Sbjct: 55  QLISGSVN--YDGLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFII 112

Query: 488 R 490
           +
Sbjct: 113 K 113



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
 Frame = +2

Query: 185 KEGKIRGTAVLVKSDVLDL--------GDFHASLLDGVHKILSKDDG--------VSFRL 316
           K  KIRGT VL++ +VLD         G+ H  +  G++ I S  DG        VS +L
Sbjct: 11  KGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQL 70

Query: 317 VSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
           +SAT  D  NG +GKVGK   LE V+ ++ +  A ES F + FEWD   G+PGA  ++
Sbjct: 71  ISATKSDA-NG-KGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHEMGIPGAFYIK 126



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDLG-------------DFHASLLDGVHKILSKDDGVSFRLVSATAP 334
           KI+GT VL++ +VLD+              D   S +D +   L +   VS +L+SAT P
Sbjct: 14  KIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRS--VSLQLISATKP 71

Query: 335 DPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
           D     +GK+GK   LE ++ ++ +  A +S FK+ FEWD+  G+PGA  ++
Sbjct: 72  DATG--KGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWDDDMGIPGAFYIK 121



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDLGDFH------------------ASLLDGVHKILSKDDGVSFRLV 319
           KI+GT VL++ +VLD                        S LD +   L +   V+ +L+
Sbjct: 18  KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRS--VALQLI 75

Query: 320 SATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
           SAT P   NG +GKVGK   LE ++V++ +  A ES F + FEWDES G+PGA  ++
Sbjct: 76  SATKP-LANG-KGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWDESMGIPGAFYIK 130



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 37/99 (37%), Positives = 57/99 (57%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFRLVSATAPDPQNGSQGKVGKP 373
           KI+GT VL+  + L++     S +D ++  L +   VS +L+SAT  D     +GKVGK 
Sbjct: 7   KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRS--VSLQLISATKADAHG--KGKVGKD 61

Query: 374 AHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
             LE +  ++ +  A ES F + FEWD S G+PGA  ++
Sbjct: 62  TFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIK 100



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDLG-------------DFHASLLDGVHKILSKDDGVSFRLVSATAP 334
           KI+GT VL++ +VL +              D   S LD +   L +   VS +L+SAT  
Sbjct: 11  KIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRP--VSLQLISATKA 68

Query: 335 DPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
           D  NG +GK+GK   LE ++ ++ +  A +S FK+ FEWD+  G+ GA  ++
Sbjct: 69  DA-NG-KGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGILGAFYIK 118



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 20/122 (16%)
 Frame = +2

Query: 185 KEGKIRGTAVLVKSDVLDLGDFHA------------------SLLDGVHKILSKDDG--V 304
           K  KI+GT VL+  +VLD     +                  SL+ GV    +   G  +
Sbjct: 7   KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66

Query: 305 SFRLVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVI 484
           S +L+SAT  D      GKVGK  +LE+ + T+ +  A +  F + FEWD S G+PGA  
Sbjct: 67  SMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFY 124

Query: 485 VR 490
           ++
Sbjct: 125 IK 126



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDL--------------------GDFHASLLDGVHKILSKDDGVSFR 313
           K++GT +L++ +VLD+                    G    S++D     L +   V  R
Sbjct: 11  KLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRS--VRLR 68

Query: 314 LVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIV 487
           L+SAT  D     +GKV K A LE ++ ++ +    +S F V FEWD + G PGA  +
Sbjct: 69  LISATVADASG--KGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWDSNMGTPGAFYI 124



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
 Frame = +2

Query: 185 KEGKIRGTAVLVKSDVLDLGD-------------FHASLLDGVHKILSKDDGVSFRLVSA 325
           K  KI+GT V+++ +VLD+               F  S +D +    +K   +S +L+SA
Sbjct: 7   KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALTFAATK---ISIQLISA 63

Query: 326 TAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIVR 490
           T  D   G +GK+GK  +L   + T+ +  A E  + V FEWD   G+PGA  ++
Sbjct: 64  TKAD---GGKGKIGKSTNLRGKI-TLPTLGAGEQAYDVNFEWDSDFGIPGAFYIK 114



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 22/121 (18%)
 Frame = +2

Query: 194 KIRGTAVLVKSDVLDLGDFHAS----------------------LLDGVHKILSKDDGVS 307
           KI+GT VL+  +V D  +F ++                      ++DG   I S++  ++
Sbjct: 10  KIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN--IA 67

Query: 308 FRLVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVPGAVIV 487
            +L+SAT  D      GKVGK   LE+ + ++ +    +  F V FEWDE+ G+P A  +
Sbjct: 68  IQLISATKTDGLGN--GKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWDENFGIPEAFYI 125

Query: 488 R 490
           +
Sbjct: 126 K 126



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>ZBT24_RAT (Q3B725) Zinc finger and BTB domain-containing protein 24 (Zinc|
           finger protein 450) (Bone morphogenetic protein-induced
           factor 1)
          Length = 705

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 21/179 (11%)
 Frame = +2

Query: 11  HHCPPCAKCISKGTGTHRLC---SSCSALPCLRCRTREQRRGEMLLHGLVDRLTGKNKEA 181
           + C  C KC S  +   R C   +      C  C  +  R   +  H    ++  K K A
Sbjct: 461 YSCSICGKCFSDSSAKRRHCVLHTGKKPFSCPECSLQFARLDNLKAH---LKIHSKEKHA 517

Query: 182 WKEGKIRGTAVLVKSDVLDLGDFHAS----------LLDGVHKI---LSKDDGVSFRLVS 322
                + G++     +VL L  +  S          + D VH I    +   GVS     
Sbjct: 518 SDSSSVSGSSADEVRNVLQLQPYQLSASGEQEIQLLVTDSVHNINFMPTPSQGVSIVAAE 577

Query: 323 AT---APDPQNGSQGKVGKPAHLEEVVVT--MKSTAAXESVFKVTFEWDESQGVPGAVI 484
           ++   A DP         +P  L+ ++++   + T   +S+  +  + D SQ  P  VI
Sbjct: 578 SSQNMATDPAANITLLTQQPEQLQGLILSAQQEQTEHIQSLGMIGSQMDTSQTEPVHVI 636



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>ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protein 210)|
          Length = 504

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 11  HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 142
           H CP CAKC ++ +   TH R  +     PC  C     +R  ++ H
Sbjct: 370 HKCPICAKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 416



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>ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SCAN|
           domain-containing protein 19)
          Length = 518

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +2

Query: 11  HHCPPCAKCI---SKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLH 142
           H CP C KC    S+ TG  R+ S      C  C  R  R  ++  H
Sbjct: 323 HRCPQCGKCFARKSQLTGHQRIHSGEEPHKCPECGKRFLRSSDLYRH 369



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>TRUA_GEOKA (Q5L3Q7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 258

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
 Frame = +2

Query: 2   PYHHHCPPCAKCISKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLHG--LVDRLTGKNK 175
           PY  H     + +    GTH   S CSA   +  R R   R E+   G  L  R  G   
Sbjct: 134 PYSLHISAMNEALRLLHGTHDFTSFCSAKTSIEDRVRTMYRAEVKADGPMLEFRFVG--- 190

Query: 176 EAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILSKDDGVSFRLVSATAP 334
                G +     ++   VL++G    S  D    + +KD     RL   TAP
Sbjct: 191 ----SGFLYNMVRIIVGTVLEIGQGKRSPADISTLLAAKDR----RLAGPTAP 235



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>ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 protein)|
          Length = 512

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 11  HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 142
           H CP C+KC ++ +   TH R  +     PC  C     +R  ++ H
Sbjct: 378 HKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 424



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>GPDA_STAHJ (Q4L6H9) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 332

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
 Frame = +2

Query: 257 SLLDGVHKILSKDDGV---SFRLVSATAPDP----QNGSQGKVGKPAHLEEVVVTMKSTA 415
           SL+D     +    G+   +F+ VS    D      NG  G +  P+H EEVV+   +T 
Sbjct: 93  SLIDSKKTFIHVAKGIENDTFKRVSEMIEDSISEDHNGGIGVLSGPSHAEEVVIKQPTTV 152

Query: 416 AXES 427
           A  S
Sbjct: 153 AASS 156



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>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200 kDa|
           helicase (EC 3.6.1.-)
          Length = 2142

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +2

Query: 98  RCRTREQRRGEMLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVH 277
           R R RE+ RG   L  ++ +L     E  +EG+ RG+    K D  D G   A  + GV 
Sbjct: 348 RQRIREKMRGNSALAKILRQLDTGKSEDQEEGEARGSK-RGKGDAEDGGAAAAGQVAGVR 406

Query: 278 KILSKDD 298
           ++L  ++
Sbjct: 407 QLLELEE 413



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>FLAD_CAUCR (P12634) Distal basal body ring component protein precursor|
          Length = 267

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
 Frame = +2

Query: 125 GEMLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLL----DGVHKILSK 292
           G + L  L D ++G         ++  TAVL    V  +    A  +    +GV +I+ +
Sbjct: 38  GRITLGDLFDGVSGPAANVVVAARMSATAVLEAGQV-QMSARRAGYVWTNANGVRRIIVR 96

Query: 293 DDGVSFRLVSATAPDPQNGSQGKVGKPAHLEEVVVTMKSTAAXESVFKVTFEWDESQGVP 472
           +   +  + S+ AP  Q       G P    EV+   +S +A E V      W +  G P
Sbjct: 97  EGVDNGGVSSSAAPGAQLAGARLAGAPRANVEVLAYARSLSAGEIVQPQDLIWVKMAGAP 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,371,995
Number of Sequences: 219361
Number of extensions: 870922
Number of successful extensions: 4238
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4214
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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