Clone Name | bastl11a12 |
---|---|
Clone Library Name | barley_pub |
>emb|CR381573.14| Zebrafish DNA sequence from clone DKEY-23M15 in linkage group 24, complete sequence Length = 120376 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 6 tcaaccaaaccccactctggcacacc 31 ||||||||||| |||||||||||||| Sbjct: 94789 tcaaccaaaccgcactctggcacacc 94764
>emb|BX005057.8| Zebrafish DNA sequence from clone DKEY-12L12 in linkage group 24, complete sequence Length = 238625 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 6 tcaaccaaaccccactctggcacacc 31 ||||||||||| |||||||||||||| Sbjct: 22845 tcaaccaaaccgcactctggcacacc 22870
>emb|AL974314.21| Zebrafish DNA sequence from clone DKEY-89P3 in linkage group 9, complete sequence Length = 192510 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 6 tcaaccaaaccccactctggcacacc 31 ||||||||||| |||||||||||||| Sbjct: 44672 tcaaccaaaccacactctggcacacc 44697
>emb|BX927327.14| Zebrafish DNA sequence from clone CH211-11C15 in linkage group 14, complete sequence Length = 182779 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 caaccaaaccccactctggcacacc 31 |||||||||| |||||||||||||| Sbjct: 130213 caaccaaaccacactctggcacacc 130237
>gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, complete sequence Length = 200968 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tgataacagcactccctttca 61 ||||||||||||||||||||| Sbjct: 199962 tgataacagcactccctttca 199942
>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21, complete sequence Length = 217310 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 7 caaccaaaccccactctggcacacc 31 |||||||||||| |||||||||||| Sbjct: 33571 caaccaaaccccgctctggcacacc 33547
>emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in linkage group 21, complete sequence Length = 216476 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 caaccaaaccccactctggcacacc 31 |||||||||||| |||||||||||| Sbjct: 152370 caaccaaaccccgctctggcacacc 152394
>gb|AC096713.3| Homo sapiens BAC clone RP11-1J11 from 4, complete sequence Length = 140106 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tgataacagcactccctttca 61 ||||||||||||||||||||| Sbjct: 988 tgataacagcactccctttca 968
>gb|AC093382.3| Homo sapiens BAC clone RP11-476D14 from 2, complete sequence Length = 57633 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tccaagggagtgaggagcaga 232 ||||||||||||||||||||| Sbjct: 18595 tccaagggagtgaggagcaga 18575
>emb|BX001038.6| Zebrafish DNA sequence from clone CH211-12M10 in linkage group 17, complete sequence Length = 180659 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 7 caaccaaaccccactctggcacacc 31 |||||||||| |||||||||||||| Sbjct: 165167 caaccaaaccgcactctggcacacc 165143
>emb|AL845421.9| Zebrafish DNA sequence from clone CH211-199I15 in linkage group 20, complete sequence Length = 148289 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 7 caaccaaaccccactctggcacacc 31 |||||||||| |||||||||||||| Sbjct: 72733 caaccaaaccgcactctggcacacc 72709
>gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, complete sequence Length = 179509 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 caaaccccactctggcacaccctc 34 ||||||||||||||||||| |||| Sbjct: 141903 caaaccccactctggcacaacctc 141926
>gb|AC093620.3| Homo sapiens BAC clone RP13-901C16 from 7, complete sequence Length = 71183 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctctggcacaccctccctcc 39 |||||||||||||||||||| Sbjct: 32658 ctctggcacaccctccctcc 32677
>gb|AC183298.3| Pan troglodytes BAC clone CH251-330I21 from chromosome 17, complete sequence Length = 174313 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aattcactcttgactatgctctga 146 |||||| ||||||||||||||||| Sbjct: 18754 aattcattcttgactatgctctga 18731
>gb|AC009623.6|AC009623 Homo sapiens chromosome 8, clone RP11-219J21, complete sequence Length = 196953 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 ctccctccttgataacagca 51 |||||||||||||||||||| Sbjct: 47041 ctccctccttgataacagca 47060
>gb|AC061965.16| Homo sapiens chromosome 15, clone RP11-37J13, complete sequence Length = 169399 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 atttgcctcccaactccctt 89 |||||||||||||||||||| Sbjct: 151485 atttgcctcccaactccctt 151466
>emb|AL451071.3|CNS07EEZ Human chromosome 14 DNA sequence BAC R-779M2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200109 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctccatttgcctcccaactc 85 |||||||||||||||||||| Sbjct: 174742 ctccatttgcctcccaactc 174723
>emb|AL390800.4|CNS06C7R Human chromosome 14 DNA sequence BAC R-254B15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169029 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ctccatttgcctcccaactc 85 |||||||||||||||||||| Sbjct: 122950 ctccatttgcctcccaactc 122969
>emb|BX640589.8| Zebrafish DNA sequence from clone CH211-222H13 in linkage group 19, complete sequence Length = 99460 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aaaccccactctggcacacc 31 |||||||||||||||||||| Sbjct: 42751 aaaccccactctggcacacc 42732
>gb|AC107633.11| Mus musculus chromosome 12, clone RP23-7P3, complete sequence Length = 202640 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctctggcacaccctccctcc 39 |||||||||||||||||||| Sbjct: 150265 ctctggcacaccctccctcc 150284
>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete sequences Length = 206624 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ctccatttgcctcccaactccctt 89 |||||||||| ||||||||||||| Sbjct: 85111 ctccatttgcttcccaactccctt 85088
>gb|AC158398.2| Mus musculus BAC clone RP23-63H11 from chromosome 12, complete sequence Length = 171334 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctctggcacaccctccctcc 39 |||||||||||||||||||| Sbjct: 112308 ctctggcacaccctccctcc 112289
>emb|AL731670.13| Mouse DNA sequence from clone RP23-463E7 on chromosome 11, complete sequence Length = 198411 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 ccctttcatcctctccattt 73 |||||||||||||||||||| Sbjct: 135491 ccctttcatcctctccattt 135510 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,420,680 Number of Sequences: 3902068 Number of extensions: 2420680 Number of successful extensions: 41881 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41852 Number of HSP's gapped (non-prelim): 29 length of query: 304 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 282 effective length of database: 17,147,199,772 effective search space: 4835510335704 effective search space used: 4835510335704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)