Clone Name | bastl11a09 |
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Clone Library Name | barley_pub |
>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1| (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) (Zinc finger protein rapa) Length = 1200 Score = 31.2 bits (69), Expect = 0.99 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 115 NSAHKGGADRVFASPVPPH-PSRTQDPIGLDLGLQGEG 225 N+ GG D ASP+ PH P T+D +GL +G + G Sbjct: 38 NAVTGGGMDAPQASPISPHFPQDTRDGLGLPVGSKNLG 75
>IF2_SILPO (Q5LWL4) Translation initiation factor IF-2| Length = 835 Score = 30.8 bits (68), Expect = 1.3 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = -3 Query: 165 RNRRGEDPIRAALVSGVRKEAWAGRRSSASREEAPAPGGGDGVRR---RDSER 16 R E+ RAA+ + +EA RS+ A P GGD RR RD ER Sbjct: 138 RREAEEEAKRAAVRAAAEQEAPKAERSAERAPAAARPEGGDNARRTTDRDRER 190
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = -3 Query: 177 RRVGRNRRGEDPIRAALVSGV-RKEAWAGRRSSASR----EEAPAPGGGDGVR 34 RR G R G +P ++ G R + G+RS SR E P PGG G R Sbjct: 205 RRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSRSGQGERMPRPGGSQGSR 257
>GUNG_CLOTM (Q05332) Endoglucanase G precursor (EC 3.2.1.4) (Egg)| (Endo-1,4-beta-glucanase) (Cellulase G) Length = 566 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 234 ASATMEAADLATDGRIFKADFTDSGAYQLR 323 ASA M+AAD+ DG++ D+T Y LR Sbjct: 528 ASANMDAADVNADGKVNSTDYTVLKRYLLR 557
>ZN688_HUMAN (Q8WV14) Zinc finger protein 688| Length = 782 Score = 29.6 bits (65), Expect = 2.9 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 Query: 224 PSPCNPRSSPMGSWVRD 174 P CNPR SPM W++D Sbjct: 161 PEFCNPRQSPMNPWLKD 177
>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS) Length = 901 Score = 29.3 bits (64), Expect = 3.7 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -3 Query: 165 RNRRGEDP-IRAALVSGVRKEAWAGRRSSASREEAPAPGGGDGVRRRDSERMR 10 R+RRG P RA G+R+ A A S EE A G++RR +E R Sbjct: 390 RSRRGRTPGPRAEQQGGLRETATASTGDSHYPEEPRAADNPSGLKRRGNELFR 442
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)| (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 28.1 bits (61), Expect = 8.3 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Frame = -3 Query: 183 GPRRVGRNRRGEDPIRAALVS------GVRKEAWA--GRRSSASREEAPAPGGGDGVRRR 28 GP VG G DPI AA+ + G R+EA A + + E P PG RR Sbjct: 115 GPEPVGTQEPGPDPIAAAVETAPAPDGGPREEAAATVRKEDEGAAEAKPEPG---RTRRD 171 Query: 27 DSERMRD 7 + E D Sbjct: 172 EPEEEED 178
>TF2B_PYROC (Q977X4) Transcription initiation factor IIB (TFIIB)| Length = 310 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 298 VKSALKMRPSVARSAASIVAEASRTPPLATLDPA 197 + SAL++ P+V R AA I+ +A + A DPA Sbjct: 225 IVSALRLSPAVERRAAEILVQARKMGLTAGKDPA 258
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 28.1 bits (61), Expect = 8.3 Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = -3 Query: 180 PRRVGRNRR-GED-PIRAALVSGVRKEAWAGRRSSASREEAPAPGGGDGVRRRDSER 16 PRR +RR GED P A G +E RS E P GGG G RR R Sbjct: 961 PRRHRVHRRPGEDGPDDKAERRGRHREGSRPARSGEGEAEGPDGGGGGGGERRRRHR 1017
>IPYR_XANCP (Q8P5M4) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 178 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%) Frame = -1 Query: 191 GSWVR-DGWGGTGEAKTL 141 G WV+ DGWGG EAK + Sbjct: 148 GKWVKLDGWGGAAEAKRI 165
>IPYR_XANAC (Q8PH18) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 178 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%) Frame = -1 Query: 191 GSWVR-DGWGGTGEAKTL 141 G WV+ DGWGG EAK + Sbjct: 148 GKWVKLDGWGGAAEAKRI 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,677,584 Number of Sequences: 219361 Number of extensions: 554288 Number of successful extensions: 2833 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2751 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2833 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)