ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1 (Transc... 31 0.99
2IF2_SILPO (Q5LWL4) Translation initiation factor IF-2 31 1.3
3IF2_PROAC (Q6A7M5) Translation initiation factor IF-2 30 1.7
4GUNG_CLOTM (Q05332) Endoglucanase G precursor (EC 3.2.1.4) (Egg)... 30 2.2
5ZN688_HUMAN (Q8WV14) Zinc finger protein 688 30 2.9
6SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-rel... 29 3.7
7WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... 28 8.3
8TF2B_PYROC (Q977X4) Transcription initiation factor IIB (TFIIB) 28 8.3
9CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ... 28 8.3
10IPYR_XANCP (Q8P5M4) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyro... 28 8.3
11IPYR_XANAC (Q8PH18) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyro... 28 8.3

>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1|
           (Transcriptional-regulating protein 132) (Zinc finger
           transcription factor TReP-132) (Zinc finger protein
           rapa)
          Length = 1200

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 115 NSAHKGGADRVFASPVPPH-PSRTQDPIGLDLGLQGEG 225
           N+   GG D   ASP+ PH P  T+D +GL +G +  G
Sbjct: 38  NAVTGGGMDAPQASPISPHFPQDTRDGLGLPVGSKNLG 75



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>IF2_SILPO (Q5LWL4) Translation initiation factor IF-2|
          Length = 835

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -3

Query: 165 RNRRGEDPIRAALVSGVRKEAWAGRRSSASREEAPAPGGGDGVRR---RDSER 16
           R    E+  RAA+ +   +EA    RS+     A  P GGD  RR   RD ER
Sbjct: 138 RREAEEEAKRAAVRAAAEQEAPKAERSAERAPAAARPEGGDNARRTTDRDRER 190



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>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = -3

Query: 177 RRVGRNRRGEDPIRAALVSGV-RKEAWAGRRSSASR----EEAPAPGGGDGVR 34
           RR G  R G +P  ++   G  R  +  G+RS  SR    E  P PGG  G R
Sbjct: 205 RRTGAPRPGNNPFASSQGMGQSRHRSEGGQRSGGSRSGQGERMPRPGGSQGSR 257



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>GUNG_CLOTM (Q05332) Endoglucanase G precursor (EC 3.2.1.4) (Egg)|
           (Endo-1,4-beta-glucanase) (Cellulase G)
          Length = 566

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 234 ASATMEAADLATDGRIFKADFTDSGAYQLR 323
           ASA M+AAD+  DG++   D+T    Y LR
Sbjct: 528 ASANMDAADVNADGKVNSTDYTVLKRYLLR 557



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>ZN688_HUMAN (Q8WV14) Zinc finger protein 688|
          Length = 782

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 224 PSPCNPRSSPMGSWVRD 174
           P  CNPR SPM  W++D
Sbjct: 161 PEFCNPRQSPMNPWLKD 177



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>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm|
           protein Spag-1) (TPR-containing protein involved in
           spermatogenesis) (TPIS)
          Length = 901

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 165 RNRRGEDP-IRAALVSGVRKEAWAGRRSSASREEAPAPGGGDGVRRRDSERMR 10
           R+RRG  P  RA    G+R+ A A    S   EE  A     G++RR +E  R
Sbjct: 390 RSRRGRTPGPRAEQQGGLRETATASTGDSHYPEEPRAADNPSGLKRRGNELFR 442



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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
 Frame = -3

Query: 183 GPRRVGRNRRGEDPIRAALVS------GVRKEAWA--GRRSSASREEAPAPGGGDGVRRR 28
           GP  VG    G DPI AA+ +      G R+EA A   +    + E  P PG     RR 
Sbjct: 115 GPEPVGTQEPGPDPIAAAVETAPAPDGGPREEAAATVRKEDEGAAEAKPEPG---RTRRD 171

Query: 27  DSERMRD 7
           + E   D
Sbjct: 172 EPEEEED 178



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>TF2B_PYROC (Q977X4) Transcription initiation factor IIB (TFIIB)|
          Length = 310

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 298 VKSALKMRPSVARSAASIVAEASRTPPLATLDPA 197
           + SAL++ P+V R AA I+ +A +    A  DPA
Sbjct: 225 IVSALRLSPAVERRAAEILVQARKMGLTAGKDPA 258



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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -3

Query: 180  PRRVGRNRR-GED-PIRAALVSGVRKEAWAGRRSSASREEAPAPGGGDGVRRRDSER 16
            PRR   +RR GED P   A   G  +E     RS     E P  GGG G  RR   R
Sbjct: 961  PRRHRVHRRPGEDGPDDKAERRGRHREGSRPARSGEGEAEGPDGGGGGGGERRRRHR 1017



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>IPYR_XANCP (Q8P5M4) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate|
           phospho-hydrolase) (PPase)
          Length = 178

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 191 GSWVR-DGWGGTGEAKTL 141
           G WV+ DGWGG  EAK +
Sbjct: 148 GKWVKLDGWGGAAEAKRI 165



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>IPYR_XANAC (Q8PH18) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate|
           phospho-hydrolase) (PPase)
          Length = 178

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 191 GSWVR-DGWGGTGEAKTL 141
           G WV+ DGWGG  EAK +
Sbjct: 148 GKWVKLDGWGGAAEAKRI 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,677,584
Number of Sequences: 219361
Number of extensions: 554288
Number of successful extensions: 2833
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2833
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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