>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
 Frame = +1

Query: 145 RFLRLLQPIRMD----------QWSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSV 291
           RF+ LL P               W SHN P+G +++T+  TL + L L F I++ + ++ 
Sbjct: 56  RFITLLLPFSYSAVQYAVLLHTNWKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITT 114

Query: 292 DPIQRWR 312
            PI +W+
Sbjct: 115 LPINKWK 121

>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 312
           W SHN P+G +++T+  TL + L+L F I++ + ++  PI +W+
Sbjct: 79  WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121

>GP53_BPSP1 (O48407) Putative gene 53 protein|
          Length = 221

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 285 QLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQE 148
           +L +  N+E Q  +  + SL S  + TL    +P   AD LEE +E
Sbjct: 94  RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139

>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein)
          Length = 1649

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = -1

Query: 288 RQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRI-------GG 130
           R L+  + EE + +E+         ++     R  +   +RLE A  S +        GG
Sbjct: 160 RLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGG 219

Query: 129 HKLPRIANPSAPDFISGREGRRSS 58
           H+   I +  +PDF+   + R +S
Sbjct: 220 HRTAAILHGGSPDFVGNGKHRANS 243

>TRME_PORGI (Q7MVZ2) tRNA modification GTPase trmE|
          Length = 474

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -1

Query: 201 RVMRTPLVHADRLEEAQESGRIGGHKL--PRIANPSAPDFISGREGR 67
           R  RT ++  ++ E   E+ RIG  +    +++ P+ P FIS REGR
Sbjct: 335 REERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGR 381

>SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 361

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 309 PPLNWI-NRQLDL--SKNEEAQDQEMNKSSLHSTVDLTLRVMRTPL 181
           P LN + NR L+L   K +  + Q MNK     TVD+TL V  +PL
Sbjct: 58  PVLNGLKNRVLELWVQKRDLLRRQAMNKRLSRETVDVTLPVRSSPL 103

>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)|
          Length = 2594

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = -1

Query: 321  PHSSPPLNWINRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQES- 145
            P    P+  +N QL+LS +  +   E+   SLHS   LTL + +     A  L     S 
Sbjct: 1738 PDCPLPVPGLNYQLNLSSSSRSAQLELR--SLHSAAGLTLNISQLQPYQAYELRAQVGSY 1795

Query: 144  --GRIGGHKL--------PRIANPSAPDFISGR 76
               ++G   L           A PSAP   SGR
Sbjct: 1796 YQQQLGQEPLQLPVLTLHTAAATPSAPRNFSGR 1828

>RS14_LEIXX (Q6ABY6) 30S ribosomal protein S14|
          Length = 101

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -1

Query: 195 MRTPLVHADRLEEAQESGRIGGHKLPRIANP---SAPDFISGREGRRSSK 55
           ++  LV  +  +E++E+ R+G  KLPR A+P      D + GR     SK
Sbjct: 27  LKKALVDPNGTDESREAARLGLQKLPRDASPIRVRNRDAVDGRPRGNLSK 76

>OPSR_ORYLA (P87367) Red-sensitive opsin (Red cone photoreceptor pigment)|
           (KFH-R)
          Length = 357

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 176 WTNGVLITLKVRSTVLCSELLFISWSWASSFLLKSSCLLIQFKGGDECGVQ 328
           W  G ++   V S V C+  +F  WS      LK+SC    F G D+ GVQ
Sbjct: 165 WAIGGIVFSWVWSAVWCAPPVF-GWSRYWPHGLKTSCGPDVFSGSDDPGVQ 214

>TRPB_CHLTE (Q8KF11) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 400

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -1

Query: 264 EEAQDQEMNKSSLHSTVDLTLR--VMR-TPLVHADRLEEAQESGRI 136
           EE   +  N    H T+D  LR  V R TPL HA RL E Q   +I
Sbjct: 36  EEEYLKAKNDPEFHQTLDNLLRHYVGRPTPLYHASRLSEKQGGAQI 81

>NU5M_BRALA (O79422) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 598

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +2

Query: 125 LWPPIRPDSCASSSRSAWTNGVLITLKVRSTVLCSELLFISWSWASSFLLKSSCLLIQFK 304
           L+  I+     S   + + N VL+++ + S    SE+LF+ W W     L    L+I F+
Sbjct: 20  LFSKIKSSFAESVKYAGYMNAVLLSILLMSDE--SEMLFLKWEWVK---LGGYSLMISFR 74

>NU5M_BRAFL (O47430) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 599

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +2

Query: 125 LWPPIRPDSCASSSRSAWTNGVLITLKVRSTVLCSELLFISWSWASSFLLKSSCLLIQFK 304
           L+  I+     S   + + N VL+++ + S    SE+LF+ W W     L    L+I F+
Sbjct: 20  LFSKIKSSFAESVKYAGYMNAVLLSILLMSDE--SEMLFLKWEWVK---LGGYSLMISFR 74

>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 264 EEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRIGGHKLPRI 112
           +E + QE  +S    T  + L    +  V +      QE  R+GGH LP++
Sbjct: 715 DELEIQEETESGSSVTSKIRLPTQPSWYVQSFLFSLCQEVNRVGGHALPKV 765

>NET1_MOUSE (O09118) Netrin-1 precursor|
          Length = 604

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 88  KIRGRRICNSGELVASNPPRFLR-LLQPIRMDQWSSHN 198
           ++R   +CNS +   ++PP FL  L  P  +  W S N
Sbjct: 87  RVRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSEN 124

>NIFJ_RHORT (Q53046) Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)|
          Length = 1191

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 168 RLEEAQESGRIGGHKLPRIANPSAPDFI 85
           RL+     G + GH LP + +  APDF+
Sbjct: 619 RLQSVTIPGVLTGHALPPLVSAGAPDFV 646

>TAAR1_PANTR (Q5QD29) Trace amine-associated receptor 1 (Trace amine receptor 1)|
           (TaR-1)
          Length = 339

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 203 KVRSTVLCSELLFISWSWASSFLLKSSCLLIQFKGGDE 316
           K+   V+C  ++FISWS  + F      L + FKG +E
Sbjct: 134 KINILVICV-MIFISWSVPAVFAFGMIFLELNFKGAEE 170

>SYS_TREDE (Q73KB2) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 422

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = -1

Query: 291 NRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRIGGHKLPRI 112
           N Q D + N ++  Q+++       VD    +          L EA+++      K+P +
Sbjct: 46  NLQKDRNDNSQSMKQKLSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNM 105

Query: 111 ANPSAP 94
           A+P AP
Sbjct: 106 AHPEAP 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,642,927
Number of Sequences: 219361
Number of extensions: 855857
Number of successful extensions: 2675
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2675
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)