ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
2emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 60 5e-06
3gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, comp... 44 0.29
4gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, comp... 44 0.29
5ref|XM_512922.1| PREDICTED: Pan troglodytes similar to NALP5 (LO... 42 1.1
6emb|CR956406.10| Pig DNA sequence from clone CH242-143L3 on chro... 42 1.1
7ref|NM_176811.2| Homo sapiens NACHT, leucine rich repeat and PYD... 42 1.1
8tpg|BK001109.1| TPA: TPA_inf: Homo sapiens NOD16 (NOD16) mRNA, c... 42 1.1
9gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, c... 42 1.1
10gb|AC160123.2| Mus musculus BAC clone RP23-354J5 from chromosome... 42 1.1
11gb|AY154463.1| Homo sapiens NALP8 (NALP8) mRNA, complete cds 42 1.1
12gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M... 42 1.1
13ref|XM_513067.1| PREDICTED: Pan troglodytes similar to putative ... 40 4.5
14gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome... 40 4.5
15gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromo... 40 4.5
16gb|AC091295.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 4.5
17ref|NM_015609.1| Homo sapiens chromosome 1 open reading frame 14... 40 4.5
18gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, compl... 40 4.5
19gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome... 40 4.5
20gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome... 40 4.5
21gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosom... 40 4.5
22gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosom... 40 4.5
23gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome ... 40 4.5
24gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, compl... 40 4.5
25gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, co... 40 4.5
26gb|AC005589.1| Homo sapiens BAC clone RP11-161H12 from 7, comple... 40 4.5
27ref|XM_846908.1| PREDICTED: Canis familiaris similar to putative... 40 4.5
28ref|XM_859680.1| PREDICTED: Canis familiaris similar to putative... 40 4.5
29gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, comp... 40 4.5
30gb|BC039981.1| Mus musculus renal tumor antigen, mRNA (cDNA clon... 40 4.5
31gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, comp... 40 4.5
32emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on ch... 40 4.5
33gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Canc... 40 4.5
34emb|AL645693.8| Mouse DNA sequence from clone RP23-217N23 on chr... 40 4.5
35gb|BC023988.1| Homo sapiens chromosome 1 open reading frame 144,... 40 4.5
36gb|BC010631.1| Homo sapiens chromosome 1 open reading frame 144,... 40 4.5
37emb|CR859294.1| Pongo pygmaeus mRNA; cDNA DKFZp468H135 (from clo... 40 4.5
38emb|CR857727.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2135 (from cl... 40 4.5
39emb|CR615655.1| full-length cDNA clone CS0DI033YE02 of Placenta ... 40 4.5
40dbj|AB097046.1| Homo sapiens mRNA for putative MAPK activating p... 40 4.5
41dbj|AB097045.1| Homo sapiens mRNA for putative MAPK activating p... 40 4.5
42dbj|AB097044.1| Homo sapiens mRNA for putative MAPK activating p... 40 4.5
43dbj|AB097043.1| Homo sapiens mRNA for putative MAPK activating p... 40 4.5
44dbj|AB097042.1| Homo sapiens mRNA for putative MAPK activating p... 40 4.5
45emb|CR626328.1| full-length cDNA clone CS0DL006YG15 of B cells (... 40 4.5
46emb|CR624498.1| full-length cDNA clone CS0DI026YO19 of Placenta ... 40 4.5
47emb|CR619544.1| full-length cDNA clone CS0DE004YJ20 of Placenta ... 40 4.5
48emb|CR619226.1| full-length cDNA clone CS0DC012YM23 of Neuroblas... 40 4.5
49emb|CR619138.1| full-length cDNA clone CS0DI006YM02 of Placenta ... 40 4.5
50emb|CR616707.1| full-length cDNA clone CS0DI005YP09 of Placenta ... 40 4.5
51emb|CR614958.1| full-length cDNA clone CS0DI024YM18 of Placenta ... 40 4.5
52emb|CR602743.1| full-length cDNA clone CS0DC024YB21 of Neuroblas... 40 4.5
53emb|CR598986.1| full-length cDNA clone CS0DI024YN19 of Placenta ... 40 4.5
54emb|CR593854.1| full-length cDNA clone CS0DI025YD12 of Placenta ... 40 4.5
55gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome... 40 4.5
56gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141... 40 4.5
57gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, c... 40 4.5
58gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Canc... 40 4.5
59gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, comple... 40 4.5
60gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Can... 40 4.5
61gb|AC006529.1|AC006529 Homo sapiens clone SCb-20L24 from 7q31, c... 40 4.5
62emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in l... 40 4.5
63emb|AJ295987.1|HSA295987 Homo sapiens mRNA for hypothetical prot... 40 4.5
64gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, comple... 40 4.5
65dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.5
66gb|BC065538.1| Homo sapiens chromosome 1 open reading frame 144,... 40 4.5
67dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 4.5
68gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome ... 40 4.5
69emb|AL050028.1|HSM800362 Homo sapiens mRNA; cDNA DKFZp566C0424 (... 40 4.5 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 10       tttggggctttgactaaaagtctcgagctaaaaa 43
                ||||||||||||||||||||||| ||||||||||
Sbjct: 19140088 tttggggctttgactaaaagtcttgagctaaaaa 19140121
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 10    tttggggctttgactaaaagtctcgagctaaaaa 43
             ||||||||||||||||||||||| ||||||||||
Sbjct: 73608 tttggggctttgactaaaagtcttgagctaaaaa 73641
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>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence
          Length = 214160

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 302    aaaggtggagatgagtgtggag 323
              ||||||||||||||||||||||
Sbjct: 102622 aaaggtggagatgagtgtggag 102601
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>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence
          Length = 171343

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 302   aaaggtggagatgagtgtggag 323
             ||||||||||||||||||||||
Sbjct: 74388 aaaggtggagatgagtgtggag 74409
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>ref|XM_512922.1| PREDICTED: Pan troglodytes similar to NALP5 (LOC456316), mRNA
          Length = 6615

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 264  cattcttgctcaagtccagctgtct 288
            ||||||||||||||||||| |||||
Sbjct: 3103 cattcttgctcaagtccagatgtct 3079
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>emb|CR956406.10| Pig DNA sequence from clone CH242-143L3 on chromosome 17, complete
             sequence
          Length = 177073

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    agctcctccgtccctccctcc 80
             |||||||||||||||||||||
Sbjct: 65685 agctcctccgtccctccctcc 65705
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>ref|NM_176811.2| Homo sapiens NACHT, leucine rich repeat and PYD containing 8 (NALP8),
            mRNA
          Length = 3934

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 264  cattcttgctcaagtccagctgtct 288
            ||||||||||||||||||| |||||
Sbjct: 3045 cattcttgctcaagtccagatgtct 3021
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>tpg|BK001109.1| TPA: TPA_inf: Homo sapiens NOD16 (NOD16) mRNA, complete cds
          Length = 3934

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 264  cattcttgctcaagtccagctgtct 288
            ||||||||||||||||||| |||||
Sbjct: 3045 cattcttgctcaagtccagatgtct 3021
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>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence
          Length = 189230

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   ggtcctgggcttcttcattct 269
             |||||||||||||||||||||
Sbjct: 91580 ggtcctgggcttcttcattct 91560
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>gb|AC160123.2| Mus musculus BAC clone RP23-354J5 from chromosome 9, complete sequence
          Length = 199457

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ctcctccgtccctccctcccc 82
              |||||||||||||||||||||
Sbjct: 175826 ctcctccgtccctccctcccc 175806
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>gb|AY154463.1| Homo sapiens NALP8 (NALP8) mRNA, complete cds
          Length = 3090

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 264  cattcttgctcaagtccagctgtct 288
            ||||||||||||||||||| |||||
Sbjct: 2917 cattcttgctcaagtccagatgtct 2893
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>gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M10, complete sequence
          Length = 157141

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 264   cattcttgctcaagtccagctgtct 288
             ||||||||||||||||||| |||||
Sbjct: 89432 cattcttgctcaagtccagatgtct 89456
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>ref|XM_513067.1| PREDICTED: Pan troglodytes similar to putative MAPK activating
           protein (LOC456475), mRNA
          Length = 850

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 814 tgctcaagtccagctgtctg 795
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>gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome 15, complete sequence
          Length = 177501

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     ctccctccccgaaataaaat 92
              ||||||||||||||||||||
Sbjct: 137380 ctccctccccgaaataaaat 137361
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>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete
             sequence
          Length = 185010

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    tccctccctccccgaaataaaatc 93
             ||||||||||||| ||||||||||
Sbjct: 89520 tccctccctccccaaaataaaatc 89543
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>gb|AC091295.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-360N5, complete
             sequence
          Length = 111108

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ctcctccgtccctccctccc 81
             ||||||||||||||||||||
Sbjct: 47222 ctcctccgtccctccctccc 47203
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>ref|NM_015609.1| Homo sapiens chromosome 1 open reading frame 144 (C1orf144), mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 539 tgctcaagtccagctgtctg 520
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>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence
          Length = 262048

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctgggcttcttcattcttgc 272
              ||||||||||||||||||||
Sbjct: 108871 ctgggcttcttcattcttgc 108852
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>gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome 7, complete sequence
          Length = 162814

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 150    cctgcgcctcctccagccgatccg 173
              |||||||||||||||||| |||||
Sbjct: 137062 cctgcgcctcctccagcccatccg 137039
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>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence
          Length = 194243

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     tcctccgtccctccctcccc 82
              ||||||||||||||||||||
Sbjct: 150365 tcctccgtccctccctcccc 150346
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>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete
             sequence
          Length = 154681

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ctcctccgtccctccctccc 81
             ||||||||||||||||||||
Sbjct: 84404 ctcctccgtccctccctccc 84385
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>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence
          Length = 161973

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 150   cctgcgcctcctccagccgatccg 173
             |||||||||||||||||| |||||
Sbjct: 73056 cctgcgcctcctccagcccatccg 73033
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>gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome 15, complete sequence
          Length = 182309

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     ctccctccccgaaataaaat 92
              ||||||||||||||||||||
Sbjct: 129046 ctccctccccgaaataaaat 129065
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>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence
          Length = 182661

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    ttcaaaggtggagatgagtgtgga 322
              ||||||| ||||||||||||||||
Sbjct: 172432 ttcaaagctggagatgagtgtgga 172409
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>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence
          Length = 184813

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgctcaagtccagctgtctg 289
             ||||||||||||||||||||
Sbjct: 26115 tgctcaagtccagctgtctg 26134
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>gb|AC005589.1| Homo sapiens BAC clone RP11-161H12 from 7, complete sequence
          Length = 132077

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    tcctccgtccctccctcccc 82
             ||||||||||||||||||||
Sbjct: 59500 tcctccgtccctccctcccc 59481
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>ref|XM_846908.1| PREDICTED: Canis familiaris similar to putative MAPK activating
           protein PM20,PM21 isoform 2, transcript variant 1
           (LOC608518), mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 597 tgctcaagtccagctgtctg 578
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>ref|XM_859680.1| PREDICTED: Canis familiaris similar to putative MAPK activating
           protein PM20,PM21 isoform 2, transcript variant 2
           (LOC608518), mRNA
          Length = 1816

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 577 tgctcaagtccagctgtctg 558
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>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence
          Length = 233476

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctgggcttcttcattcttgc 272
              ||||||||||||||||||||
Sbjct: 195364 ctgggcttcttcattcttgc 195345
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>gb|BC039981.1| Mus musculus renal tumor antigen, mRNA (cDNA clone IMAGE:4952067),
            complete cds
          Length = 5043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 270  tgctcaagtccagctgtctg 289
            ||||||||||||||||||||
Sbjct: 2191 tgctcaagtccagctgtctg 2172
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>gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, complete sequence
          Length = 190630

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     tcctccgtccctccctcccc 82
              ||||||||||||||||||||
Sbjct: 117539 tcctccgtccctccctcccc 117520
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>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the
             5' end of a novel gene (KIAA1332), a ribosomal protein L22
             (RPL22) pseudogene, a putative MAPK activating protein
             (DKFZp566C0424), a novel gene (LOC374955) and two CpG
             islands, complete sequence
          Length = 124949

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   tgctcaagtccagctgtctg 289
             ||||||||||||||||||||
Sbjct: 80548 tgctcaagtccagctgtctg 80529
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>gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 173270

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 226    cagtgaactcttgttcatttcttg 249
              ||||||| ||||||||||||||||
Sbjct: 112722 cagtgaaatcttgttcatttcttg 112699
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>emb|AL645693.8| Mouse DNA sequence from clone RP23-217N23 on chromosome 13 Contains the
             3' end of a novel serine (or cysteine) proteinase
             inhibitor, clade B (Serpinb) or serine protease inhibitor
             (Spi) family member, complete sequence
          Length = 13777

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tcctccgtccctccctcccc 82
             ||||||||||||||||||||
Sbjct: 11183 tcctccgtccctccctcccc 11202
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>gb|BC023988.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone
           MGC:24215 IMAGE:3825796), complete cds
          Length = 1701

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 539 tgctcaagtccagctgtctg 520
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>gb|BC010631.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone
           IMAGE:3867552), with apparent retained intron
          Length = 3416

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 494 tgctcaagtccagctgtctg 475
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>emb|CR859294.1| Pongo pygmaeus mRNA; cDNA DKFZp468H135 (from clone DKFZp468H135)
          Length = 3458

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 533 tgctcaagtccagctgtctg 514
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>emb|CR857727.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2135 (from clone DKFZp469P2135)
          Length = 1723

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 584 tgctcaagtccagctgtctg 565
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>emb|CR615655.1| full-length cDNA clone CS0DI033YE02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1600

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 501 tgctcaagtccagctgtctg 482
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>dbj|AB097046.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM22
          Length = 1731

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 572 tgctcaagtccagctgtctg 553
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>dbj|AB097045.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM21
          Length = 904

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 513 tgctcaagtccagctgtctg 494
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>dbj|AB097044.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM20
          Length = 904

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 513 tgctcaagtccagctgtctg 494
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>dbj|AB097043.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM19
          Length = 1585

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 522 tgctcaagtccagctgtctg 503
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>dbj|AB097042.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM18
          Length = 1585

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 522 tgctcaagtccagctgtctg 503
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>emb|CR626328.1| full-length cDNA clone CS0DL006YG15 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1663

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 556 tgctcaagtccagctgtctg 537
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>emb|CR624498.1| full-length cDNA clone CS0DI026YO19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1630

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 502 tgctcaagtccagctgtctg 483
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>emb|CR619544.1| full-length cDNA clone CS0DE004YJ20 of Placenta of Homo sapiens
           (human)
          Length = 1622

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 505 tgctcaagtccagctgtctg 486
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>emb|CR619226.1| full-length cDNA clone CS0DC012YM23 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1594

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 517 tgctcaagtccagctgtctg 498
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>emb|CR619138.1| full-length cDNA clone CS0DI006YM02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1575

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 504 tgctcaagtccagctgtctg 485
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>emb|CR616707.1| full-length cDNA clone CS0DI005YP09 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1605

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 504 tgctcaagtccagctgtctg 485
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>emb|CR614958.1| full-length cDNA clone CS0DI024YM18 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 906

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 557 tgctcaagtccagctgtctg 538
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>emb|CR602743.1| full-length cDNA clone CS0DC024YB21 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1663

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 567 tgctcaagtccagctgtctg 548
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>emb|CR598986.1| full-length cDNA clone CS0DI024YN19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1625

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 520 tgctcaagtccagctgtctg 501
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>emb|CR593854.1| full-length cDNA clone CS0DI025YD12 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1616

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 517 tgctcaagtccagctgtctg 498
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>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence
          Length = 197420

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    cttgttcatttcttggtcct 254
              ||||||||||||||||||||
Sbjct: 164271 cttgttcatttcttggtcct 164252
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>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
            gene, partial cds; and RST and OAT4 genes, complete cds,
            complete sequence
          Length = 170114

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 70   tccctccctccccgaaataaaatc 93
            ||||||||||||| ||||||||||
Sbjct: 2847 tccctccctccccaaaataaaatc 2870
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>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence
          Length = 203300

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    tccctccctccccgaaataaaatc 93
             ||||||||||||| ||||||||||
Sbjct: 66585 tccctccctccccaaaataaaatc 66562
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>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    ttcaaaggtggagatgagtgtgga 322
              ||||||| ||||||||||||||||
Sbjct: 105042 ttcaaagctggagatgagtgtgga 105019
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>gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, complete sequence
          Length = 194508

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   atggagttctcataaccctc 202
             ||||||||||||||||||||
Sbjct: 16862 atggagttctcataaccctc 16843
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>gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 150579

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    tgctcaagtccagctgtctg 289
              ||||||||||||||||||||
Sbjct: 144570 tgctcaagtccagctgtctg 144551
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>gb|AC006529.1|AC006529 Homo sapiens clone SCb-20L24 from 7q31, complete sequence
          Length = 178069

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ctcctccgtccctccctccc 81
             ||||||||||||||||||||
Sbjct: 79671 ctcctccgtccctccctccc 79652
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>emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in linkage group 4,
             complete sequence
          Length = 218203

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ctcctccgtccctccctccc 81
             ||||||||||||||||||||
Sbjct: 44704 ctcctccgtccctccctccc 44685
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>emb|AJ295987.1|HSA295987 Homo sapiens mRNA for hypothetical protein (ORF1), clone
           Telethon(Italy_B41)_Strait01448_FL406
          Length = 3429

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 518 tgctcaagtccagctgtctg 499
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>gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, complete sequence
          Length = 185363

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     tttggggctttgactaaaag 29
              ||||||||||||||||||||
Sbjct: 121662 tttggggctttgactaaaag 121643
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>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
              sequence
          Length = 160739

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     tccctccctccccgaaataaaatc 93
              ||||||||||||| ||||||||||
Sbjct: 157893 tccctccctccccaaaataaaatc 157870
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>gb|BC065538.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone
           MGC:70432 IMAGE:6053254), complete cds
          Length = 954

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 519 tgctcaagtccagctgtctg 500
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>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete
              sequence
          Length = 165113

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    actgtgcagtgaactcttgt 239
              ||||||||||||||||||||
Sbjct: 116096 actgtgcagtgaactcttgt 116077
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>gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome 7, complete sequence
          Length = 241077

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     ctcctccgtccctccctccc 81
              ||||||||||||||||||||
Sbjct: 134474 ctcctccgtccctccctccc 134493
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>emb|AL050028.1|HSM800362 Homo sapiens mRNA; cDNA DKFZp566C0424 (from clone DKFZp566C0424);
           partial cds
          Length = 1651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tgctcaagtccagctgtctg 289
           ||||||||||||||||||||
Sbjct: 518 tgctcaagtccagctgtctg 499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,134,553
Number of Sequences: 3902068
Number of extensions: 3134553
Number of successful extensions: 215970
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 215741
Number of HSP's gapped (non-prelim): 229
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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