Clone Name | bastl10h09 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DNBI_EBV (P03227) Major DNA-binding protein | 29 | 4.2 |
---|
>DNBI_EBV (P03227) Major DNA-binding protein| Length = 1128 Score = 28.9 bits (63), Expect = 4.2 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +3 Query: 39 RPCASGPHSPSVTGTRAPG 95 RPC SG P VTGT PG Sbjct: 381 RPCFSGWGGPDVTGTNGPG 399 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,559,576 Number of Sequences: 219361 Number of extensions: 248440 Number of successful extensions: 1005 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1005 length of database: 80,573,946 effective HSP length: 11 effective length of database: 78,160,975 effective search space used: 1875863400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)