ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl10h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1B2L13_HUMAN (Q9BXK5) Bcl-2-like 13 protein (Mil1 protein) (Bcl-r... 30 1.1
2PELI1_MOUSE (Q8C669) Protein pellino homolog 1 (Pellino-1) 30 1.4
3PELI1_HUMAN (Q96FA3) Protein pellino homolog 1 (Pellino-1) (Pell... 30 1.4
4CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC do... 30 1.9
5CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC do... 30 1.9
6GIDA_COXBU (P94613) tRNA uridine 5-carboxymethylaminomethyl modi... 29 2.4
7GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modi... 29 2.4
8MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.4... 29 3.2
9ZMYM3_MOUSE (Q9JLM4) Zinc finger MYM-type protein 3 (Zinc finger... 29 3.2
10YLD3_CAEEL (Q03568) Hypothetical protein C38C10.3 28 4.2
11CCD50_CHICK (Q5ZM86) Coiled-coil domain-containing protein 50 28 5.4
12TUD_DROME (P25823) Maternal protein tudor 28 5.4
13GUF1_YEAST (P46943) GTP-binding protein GUF1 (GTPase GUF1) 28 7.1
14EZH2_MOUSE (Q61188) Enhancer of zeste homolog 2 (ENX-1) 27 9.3
15EZH2_HUMAN (Q15910) Enhancer of zeste homolog 2 (ENX-1) 27 9.3
16CWC25_DEBHA (Q6BNE1) Pre-mRNA-splicing factor CWC25 27 9.3
17LCR48_ARATH (P82763) Putative low-molecular-weight cysteine-rich... 27 9.3
18WIN1_SCHPO (O74304) MAP kinase kinase kinase win1 (EC 2.7.11.25) 27 9.3
19COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor 27 9.3
20BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like... 27 9.3

>B2L13_HUMAN (Q9BXK5) Bcl-2-like 13 protein (Mil1 protein) (Bcl-rambo)|
          Length = 485

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   ISHKKVG-RRENILSIHSPSSERKKKQPSENKSETKTAELIGNIQMLPL 144
           +S K++  R E+++   SP+SE+K   PSE KS    A   G ++ +PL
Sbjct: 409 LSEKEINAREESLVEELSPASEKKPVPPSEGKSRLSPA---GEMKPMPL 454



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>PELI1_MOUSE (Q8C669) Protein pellino homolog 1 (Pellino-1)|
          Length = 418

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 161 AYPLQKISFLAPNQGPLVCCFRNYIHTHHHWSEQQEREGR 280
           A+P  K   +   + P V     ++H +H+W  ++ER+G+
Sbjct: 290 AFPSMKRKDVVDEKQPWVYLNCGHVHGYHNWGNKEERDGK 329



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>PELI1_HUMAN (Q96FA3) Protein pellino homolog 1 (Pellino-1) (Pellino-related|
           intracellular signaling molecule)
          Length = 418

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 161 AYPLQKISFLAPNQGPLVCCFRNYIHTHHHWSEQQEREGR 280
           A+P  K   +   + P V     ++H +H+W  ++ER+G+
Sbjct: 290 AFPSMKRKDVVDEKQPWVYLNCGHVHGYHNWGNKEERDGK 329



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>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 656

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 63  KKKEATEREQKRNQNSRADWKHPDAAAATNSA 158
           KKKE   +  ++ Q  +  WKHP+ A A + A
Sbjct: 339 KKKEERYKRHRQKQKHKDKWKHPERADAKDPA 370



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>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 660

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 63  KKKEATEREQKRNQNSRADWKHPDAAAATNSA 158
           KKKE   +  ++ Q  +  WKHP+ A A + A
Sbjct: 343 KKKEERYKRHRQKQKHKDKWKHPERADAKDPA 374



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>GIDA_COXBU (P94613) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 627

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 51  SFF*KKKEATEREQKRNQNSRADWKHPDAAAATNSAKRIPSRKYHF*RLIKDP 209
           +FF KKKE  E+EQ+R +  R   K   A A  +  +++  R Y    L++ P
Sbjct: 465 NFFVKKKETIEKEQQRLKKQRIWPKSTVAKAIESRFQQLLERDYSAMDLLRRP 517



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>GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 652

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +3

Query: 57  F*KKKEATEREQKRNQNSRADWKHPDAAAATNSAK---RIPSRKYHF*RLIKDP 209
           F +K++A ERE  R    RA W HP    A ++ +   +   R+Y F  L++ P
Sbjct: 466 FCEKRDAIERETAR---LRAAWAHPARVPAVDAERVVGKALEREYRFFELLRRP 516



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>MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Querkopf protein)
          Length = 1872

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 19   GRRENILSIHSPSSERKKKQPSENKSETKTAELIGNIQMLPLLLTQP 159
            G R  +L +   SSE ++++  E+  E +  E   +IQ  P  LT+P
Sbjct: 874  GERGQLLELSKESSEEEEEEEEEDDEEEEEEEEEESIQTSPPRLTKP 920



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>ZMYM3_MOUSE (Q9JLM4) Zinc finger MYM-type protein 3 (Zinc finger protein 261)|
           (DXHXS6673E protein)
          Length = 1370

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 43  IHSPSSERKKKQPSENKSET----KTAELIGNIQMLPLLLTQPSVSPP 174
           ++S SSE K + PS+ K E     +T +  GN+   P+    PSV  P
Sbjct: 772 LNSQSSESKPQTPSQTKVENNHTVRTPDENGNLGKTPVKRATPSVPTP 819



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>YLD3_CAEEL (Q03568) Hypothetical protein C38C10.3|
          Length = 301

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 55  SSERKKKQPSENKSETKTAELIGNIQMLPLLLTQPSVSPP 174
           SSERK++  +   S +++   +GNIQ      T PSV  P
Sbjct: 107 SSERKRRTLARPSSSSESDLKVGNIQQSNQYFTLPSVMKP 146



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>CCD50_CHICK (Q5ZM86) Coiled-coil domain-containing protein 50|
          Length = 301

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 63  KKKEATEREQKRNQNSRADWKHPDAAAATNSAKRIPSRKYH 185
           K+KE +  E+KRN     DWKH  + +  + +K  P  + H
Sbjct: 219 KEKEKSSFERKRND---QDWKHDASESPRSRSKEGPETQRH 256



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>TUD_DROME (P25823) Maternal protein tudor|
          Length = 2515

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +1

Query: 19   GRRENILSIHSPSSERKKKQPSENKSE---TKTAELIGNIQMLPLLLTQPSVSPPE 177
            GR+E +    S ++  KKKQ ++   E   +K AE    +   P+ L  PS  P E
Sbjct: 1519 GRKETVSKSGSANASPKKKQHNDKDREPKKSKPAEPARTVAPQPVALKTPSPVPAE 1574



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>GUF1_YEAST (P46943) GTP-binding protein GUF1 (GTPase GUF1)|
          Length = 645

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +1

Query: 13  KVGRRENILSIHSPSSERKKKQPSENKSETKTAELIGNIQM 135
           K  R++ +  +H+    R+KK  ++ K   K  + +GNIQ+
Sbjct: 594 KARRKDVLQKLHASDVSRRKKLLAKQKEGKKHMKTVGNIQI 634



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>EZH2_MOUSE (Q61188) Enhancer of zeste homolog 2 (ENX-1)|
          Length = 746

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 61  ERKKKQPSENKSETKTAELIGNIQMLPLLLTQPSVSPPENI 183
           E   K+  E K ET ++    +    P+ + +P++ PPEN+
Sbjct: 391 ENNDKEEEEKKDETSSSSEANSRCQTPIKM-KPNIEPPENV 430



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>EZH2_HUMAN (Q15910) Enhancer of zeste homolog 2 (ENX-1)|
          Length = 746

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 61  ERKKKQPSENKSETKTAELIGNIQMLPLLLTQPSVSPPENI 183
           E   K+  E K ET ++    +    P+ + +P++ PPEN+
Sbjct: 391 ENNDKEEEEKKDETSSSSEANSRCQTPIKM-KPNIEPPENV 430



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>CWC25_DEBHA (Q6BNE1) Pre-mRNA-splicing factor CWC25|
          Length = 244

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 233 IHTHHHWSEQQEREGRGEKKSSHK 304
           +  H H S ++ R GR + KSSH+
Sbjct: 189 VSKHRHSSHRESRSGRSKLKSSHR 212



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>LCR48_ARATH (P82763) Putative low-molecular-weight cysteine-rich protein LCR48|
           precursor
          Length = 80

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
 Frame = +2

Query: 32  TFYLSTLLLLKEKRSNRARTKAKPKQPS*LETSRCCRCY*---------LSQAYPLQKIS 184
           TF+L  LL++     N   ++ K K    LE    C  Y          LS  YP  +  
Sbjct: 9   TFFLVGLLVISSSPQNAIASEIKAKING-LECFNTCTSYYDDHKCNVDCLSSGYPAGECY 67

Query: 185 FLAPNQGPLVCCF 223
            ++P+Q    CC+
Sbjct: 68  TVSPSQPKKCCCY 80



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>WIN1_SCHPO (O74304) MAP kinase kinase kinase win1 (EC 2.7.11.25)|
          Length = 1436

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +1

Query: 22  RRENILSIHSPSSERKKKQPSENKSETKTAELIGNIQMLPLLLTQPSVSPPEN 180
           RR++     S  +E   ++ S+  SET T   + ++  LP LL+   ++ P+N
Sbjct: 264 RRDSSTYYFSNVNETYDEEDSDLDSETSTVNWVQSVLNLPSLLSDDLMANPKN 316



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>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor|
          Length = 3063

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 97   ETKTAELIGNIQMLPLLLTQPSVSPPENI 183
            E+++ +LIG+ + LP+L TQ   S P N+
Sbjct: 1731 ESESDDLIGSERTLPILTTQAPKSGPRNL 1759



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>BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like protein)|
          Length = 726

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 63  KKKEATEREQKRNQNSRADWKHPDAAAATNSAKRIPSRK 179
           KKKE  E+E+K+    +   KH   A     AK  P  K
Sbjct: 490 KKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAK 528


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,116,485
Number of Sequences: 219361
Number of extensions: 576948
Number of successful extensions: 1727
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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