>dbj|AK067479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107M10, full
           insert sequence
          Length = 3250

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 230 cacgagcccgtccggggacagtacgacttcgagggcaggaatgacct 276
           |||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 564 cacgaggccgtccggggacagtacgacttcgagggcaggaaggacct 610

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 247     acagtacgacttcgagggcaggaatgacct 276
               |||||||||||||||||||||||| |||||
Sbjct: 8171644 acagtacgacttcgagggcaggaaggacct 8171615



 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 13       cgtcgcccacactccactccacg 35
                |||||||||||||||||||||||
Sbjct: 23375678 cgtcgcccacactccactccacg 23375700

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 247     acagtacgacttcgagggcaggaatgacct 276
               |||||||||||||||||||||||| |||||
Sbjct: 8169479 acagtacgacttcgagggcaggaaggacct 8169450



 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 13       cgtcgcccacactccactccacg 35
                |||||||||||||||||||||||
Sbjct: 23368706 cgtcgcccacactccactccacg 23368728

>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12,
              complete sequence
          Length = 195583

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 247    acagtacgacttcgagggcaggaatgacct 276
              |||||||||||||||||||||||| |||||
Sbjct: 103074 acagtacgacttcgagggcaggaaggacct 103045

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 161     cgcggcggcggccctgctgctcgc 184
               ||||||||||||||||||||||||
Sbjct: 3806828 cgcggcggcggccctgctgctcgc 3806805

>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete
             sequence
          Length = 129647

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 13    cgtcgcccacactccactccacg 35
             |||||||||||||||||||||||
Sbjct: 58334 cgtcgcccacactccactccacg 58356

>ref|XM_542189.2| PREDICTED: Canis familiaris similar to signal peptide peptidase-like
            2B isoform 2 (LOC485071), mRNA
          Length = 2643

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 174  ctgctgctcgcgctgctctgcctggc 199
            ||||||||||| ||||||||||||||
Sbjct: 1276 ctgctgctcgcactgctctgcctggc 1301

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 124     gcgacaaagcaatggcggccgtcggcaggc 153
               ||||||| ||||||||||||| ||||||||
Sbjct: 6229396 gcgacaaggcaatggcggccgccggcaggc 6229367

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 162     gcggcggcggccctgctgctcgcgctgctc 191
               |||||||||| | |||||||||||||||||
Sbjct: 2066216 gcggcggcgggcgtgctgctcgcgctgctc 2066245

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     ggcggccctgctgctcgcgct 187
               |||||||||||||||||||||
Sbjct: 5318653 ggcggccctgctgctcgcgct 5318633

>ref|XM_532375.2| PREDICTED: Canis familiaris similar to TPA regulated locus
           (LOC475144), mRNA
          Length = 1509

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 173 cctgctgctcgcgctgctctg 193
           |||||||||||||||||||||
Sbjct: 60  cctgctgctcgcgctgctctg 80

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 169    cggccctgctgctcgcgctgctctg 193
              ||||| |||||||||||||||||||
Sbjct: 228771 cggccatgctgctcgcgctgctctg 228747

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   gcggcggccctgctgctcgcg 185
             |||||||||||||||||||||
Sbjct: 66011 gcggcggccctgctgctcgcg 65991

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     tgccgagcgcggcggcggccc 174
               |||||||||||||||||||||
Sbjct: 4118766 tgccgagcgcggcggcggccc 4118786



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     cggggacgtcggcggcgacc 218
               ||||||||||||||||||||
Sbjct: 5397202 cggggacgtcggcggcgacc 5397183

>gb|AY280500.2| Sandersonia aurantiaca beta-galactosidase (GAL3) mRNA, partial cds
          Length = 2618

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 228 tccacgagcccgtccggggacagtacgacttcgagggcaggaatgacctggtg 280
           ||||||||||| | | |||||||||||| ||| | || ||||| |||||||||
Sbjct: 140 tccacgagcccctacagggacagtacgatttccaagggaggaaggacctggtg 192

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    gcggcggcggccctgctgct 181
              ||||||||||||||||||||
Sbjct: 556863 gcggcggcggccctgctgct 556882

>gb|DQ213916.1| Taeniopygia guttata clone 0058P0058F05 macrophage migration
           inhibitory factor (MIF) variant 1-like mRNA, complete
           sequence
          Length = 1030

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 159 agcgcggcggcggccctgctgctc 182
           |||||||||||||||| |||||||
Sbjct: 29  agcgcggcggcggccccgctgctc 52

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 155     gccgagcgcggcggcggccc 174
               ||||||||||||||||||||
Sbjct: 1535263 gccgagcgcggcggcggccc 1535244

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     gcaggctgccgagcgcggcg 167
               ||||||||||||||||||||
Sbjct: 2146268 gcaggctgccgagcgcggcg 2146249

>ref|XM_530663.1| PREDICTED: Pan troglodytes LOC460813 (LOC460813), mRNA
          Length = 1057

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 gccctgctgctcgcgctgct 190
           ||||||||||||||||||||
Sbjct: 501 gccctgctgctcgcgctgct 482

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     cggccctgctgctcgcgctg 188
               ||||||||||||||||||||
Sbjct: 2534797 cggccctgctgctcgcgctg 2534816

>gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, complete sequence
          Length = 187495

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    ggccctgctgctcgcgctgctctg 193
              |||||||||||||| |||||||||
Sbjct: 133930 ggccctgctgctcgggctgctctg 133907

>gb|AY098636.1| Mus musculus testhymin mRNA, complete cds
          Length = 6258

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ctgccgagcgcggcggcggc 172
           ||||||||||||||||||||
Sbjct: 590 ctgccgagcgcggcggcggc 571

>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  cggggacgtcggcggcgacc 218
            ||||||||||||||||||||
Sbjct: 6117 cggggacgtcggcggcgacc 6098

>gb|AY641455.1| Burkholderia glumae DNA binding protein (toxJ), putative transposase,
            putative outer membrane protein OprM precursor (toxI),
            probable RND efflux transporter (toxH), probable RND
            efflux membrane-fusion protein precursor (toxG),
            hypothetical protein (toxF), LysR type regulatory protein
            (toxR), putative ubiquinone/menaquinone biosynthesis
            methyltransferase (toxA), putative GTP cyclohydrolase II
            (toxB), WD repeat portein (toxC), hypothetical protein
            (toxD), putative deaminase (toxE), and putative
            transposase genes, complete cds
          Length = 16987

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  gcggcggccctgctgctcgc 184
            ||||||||||||||||||||
Sbjct: 3749 gcggcggccctgctgctcgc 3730

>gb|AC156290.10| Mus musculus 6 BAC RP24-267I24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 144883

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ctgccgagcgcggcggcggc 172
             ||||||||||||||||||||
Sbjct: 31445 ctgccgagcgcggcggcggc 31426

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   gcggcggccctgctgctcgc 184
             ||||||||||||||||||||
Sbjct: 72763 gcggcggccctgctgctcgc 72744

>ref|XM_575380.1| PREDICTED: Rattus norvegicus similar to testhymin (LOC500026), mRNA
          Length = 2369

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ctgccgagcgcggcggcggc 172
           ||||||||||||||||||||
Sbjct: 212 ctgccgagcgcggcggcggc 193

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     tggcggggacgtcggcggcg 215
               ||||||||||||||||||||
Sbjct: 4413242 tggcggggacgtcggcggcg 4413261

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    tgccgagcgcggcggcggcc 173
              ||||||||||||||||||||
Sbjct: 749571 tgccgagcgcggcggcggcc 749590

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     gcggcggccctgctgctcgc 184
               ||||||||||||||||||||
Sbjct: 3137752 gcggcggccctgctgctcgc 3137733

>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323,
             complete sequence
          Length = 66637

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   gccctgctgctcgcgctgct 190
             ||||||||||||||||||||
Sbjct: 25565 gccctgctgctcgcgctgct 25584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,266,403
Number of Sequences: 3902068
Number of extensions: 2266403
Number of successful extensions: 45563
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43949
Number of HSP's gapped (non-prelim): 1614
length of query: 282
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 260
effective length of database: 17,147,199,772
effective search space: 4458271940720
effective search space used: 4458271940720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)