ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl10f07 |
|---|---|
| Clone Library Name | barley_pub |
>AMPE_HUMAN (Q07075) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP)| (Aminopeptidase A) (APA) (Differentiation antigen gp160) (CD249 antigen) Length = 957 Score = 46.2 bits (108), Expect = 2e-05 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Frame = +1 Query: 34 PSTPPLQ---ICPPTMAESPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXX 204 PS PP Q ICP + ES + RLP F P+ YDL + P L T++G Sbjct: 67 PSGPPAQDQDICPASEDESGQW--KNFRLPDFVNPVHYDLHVKPLLEEDTYTGTVSISIN 124 Query: 205 XXXPTRFLVLNAAELAVDR 261 PTR+L L+ E + R Sbjct: 125 LSAPTRYLWLHLRETRITR 143
>ARTS1_RAT (Q9JJ22) Adipocyte-derived leucine aminopeptidase precursor (EC| 3.4.11.-) (A-LAP) (ARTS-1) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP) Length = 930 Score = 41.6 bits (96), Expect = 5e-04 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 8/94 (8%) Frame = +1 Query: 58 CPPTMAESPEQFRGQS------RLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPT 219 C + SP+ G S RLP + P+ YDL++ +L+ TF G PT Sbjct: 20 CQNSDTASPKASNGASFPWNNMRLPEYITPIHYDLMIHANLSTLTFWGKTEVEITVSQPT 79 Query: 220 RFLVLNAAELAVDRSSIR--FQDWAPTEVVQFEE 315 +++++ +L + ++++R ++ P E ++ E Sbjct: 80 STIIMHSHQLQISKATLRRGAEEMLPEEPLKLME 113
>AMPE_PIG (Q95334) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP)| (Aminopeptidase A) (APA) Length = 942 Score = 41.6 bits (96), Expect = 5e-04 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Frame = +1 Query: 22 NLPRPSTPPLQ--ICPPTMAESPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXX 195 +LP S+PP +CP + ES RLP F P+ YDL + P L T++G Sbjct: 54 HLPPTSSPPQDQGVCPASEDESGNW--RDFRLPDFINPVHYDLQVKPLLEQDTYTGTVNI 111 Query: 196 XXXXXXPTRFLVLNAAELAVDRSSIRFQDWAPT-EVVQ------FEEDEILVLGIGREL 351 PT+ L L+ E + + + W P+ E VQ +++ E +V+ EL Sbjct: 112 SINVTSPTQHLWLHLRETRITQLPVL---WRPSGEQVQVRRCFEYKKQEYVVVEAEEEL 167
>TRHDE_MOUSE (Q8K093) Thyrotropin-releasing hormone degrading ectoenzyme (EC| 3.4.19.6) (TRH-degrading ectoenzyme) (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase) (Pyroglutamyl-peptidase II) (PAP-II) Length = 1025 Score = 40.8 bits (94), Expect = 8e-04 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1 Query: 34 PSTPPLQICPPTMAESPEQFRG--QSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXX 207 P TP Q P E EQ++ Q RL +PL Y+L+L+ + TFSG Sbjct: 118 PGTPSAQ---PPSEEEREQWQPWTQLRLSGHLKPLHYNLMLTAFMENFTFSGEVNVEIAC 174 Query: 208 XXPTRFLVLNAAELAVDRSSI 270 TR++VL+A+ +AV++ + Sbjct: 175 RNATRYVVLHASRVAVEKVQV 195
>ARTS1_HUMAN (Q9NZ08) Adipocyte-derived leucine aminopeptidase precursor (EC| 3.4.11.-) (A-LAP) (ARTS-1) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP) (Type 1 tumor necrosis factor receptor shedding aminopeptidase r Length = 929 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +1 Query: 106 RLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVDRSSIR 273 RLP + P+ YDL++ +L TF G PT ++L++ L + R+++R Sbjct: 41 RLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLR 96
>ARTS1_MOUSE (Q9EQH2) Adipocyte-derived leucine aminopeptidase precursor (EC| 3.4.11.-) (A-LAP) (ARTS-1) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP) (VEGF-induced aminopeptidase) Length = 930 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/56 (26%), Positives = 31/56 (55%) Frame = +1 Query: 106 RLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVDRSSIR 273 RLP + P+ YDL++ +L+ TF G PT +++++ L + ++++R Sbjct: 42 RLPEYMTPIHYDLMIHANLSTLTFWGKTEVEIIASRPTSTIIMHSHHLQISKATLR 97
>TRHDE_RAT (Q10836) Thyrotropin-releasing hormone degrading ectoenzyme (EC| 3.4.19.6) (TRH-degrading ectoenzyme) (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase) (Pyroglutamyl-peptidase II) (PAP-II) Length = 1025 Score = 38.5 bits (88), Expect = 0.004 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Frame = +1 Query: 16 QKNLPRPSTPPLQICPPTMAESPEQFRG--QSRLPRFAEPLRYDLVLSPDLAACTFSGXX 189 Q+ + T P E EQ++ Q RL +PL Y+L+L+ + TFSG Sbjct: 109 QREIGEVGTAGTPSAHPPSEEEQEQWQPWTQLRLSGHLKPLHYNLMLTAFMENFTFSGEV 168 Query: 190 XXXXXXXXPTRFLVLNAAELAVDRSSI 270 TR++VL+A+ +AV++ + Sbjct: 169 NVEIACQNATRYVVLHASRVAVEKVQV 195
>PSA_HUMAN (P55786) Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)| Length = 919 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/66 (33%), Positives = 31/66 (46%) Frame = +1 Query: 70 MAESPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAEL 249 +A PE+ R RLP P+ Y L L PDL TF G T +V+N A++ Sbjct: 42 LAAMPEK-RPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADI 100 Query: 250 AVDRSS 267 + +S Sbjct: 101 DIITAS 106
>AMPE_MOUSE (P16406) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP)| (Aminopeptidase A) (APA) (BP-1/6C3 antigen) Length = 945 Score = 38.1 bits (87), Expect = 0.005 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 11/95 (11%) Frame = +1 Query: 10 CVQKNLPRPSTPPLQ-----------ICPPTMAESPEQFRGQSRLPRFAEPLRYDLVLSP 156 C Q P PS PP + +CP + ES E RLP F P+ YDL + Sbjct: 43 CEQDTTPAPSQPPPEASTALPPQDQNVCPDSEDESGEW--KNFRLPDFINPVHYDLEVKA 100 Query: 157 DLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVDR 261 + ++G PTR L L+ E + + Sbjct: 101 LMEEDRYTGIVTISVNLSKPTRDLWLHIRETKITK 135
>PSA_MOUSE (Q11011) Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)| Length = 920 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/66 (33%), Positives = 31/66 (46%) Frame = +1 Query: 70 MAESPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAEL 249 +A PE+ R RLP P+ Y L L PDL TF G T +V+N A++ Sbjct: 43 LAAMPEK-RPFERLPAEVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADI 101 Query: 250 AVDRSS 267 + +S Sbjct: 102 DIITAS 107
>TRHDE_HUMAN (Q9UKU6) Thyrotropin-releasing hormone degrading ectoenzyme (EC| 3.4.19.6) (TRH-degrading ectoenzyme) (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase) (Pyroglutamyl-peptidase II) (PAP-II) Length = 1024 Score = 37.0 bits (84), Expect = 0.012 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = +1 Query: 34 PSTPPLQICPPTMAE-SPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXX 210 P T Q PP+ E P + Q RL +PL Y+L+L+ + TFSG Sbjct: 117 PGTTSAQ--PPSEEEREPWEPWTQLRLSGHLKPLHYNLMLTAFMENFTFSGEVNVEIACR 174 Query: 211 XPTRFLVLNAAELAVDR 261 TR++VL+A+ +AV++ Sbjct: 175 NATRYVVLHASRVAVEK 191
>LCAP_RAT (P97629) Leucyl-cystinyl aminopeptidase (EC 3.4.11.3) (Cystinyl| aminopeptidase) (Oxytocinase) (OTase) (Insulin-regulated membrane aminopeptidase) (Insulin-responsive aminopeptidase) (IRAP) (Placental leucine aminopeptidase) (P-LAP) (Vesicle prot Length = 1025 Score = 34.7 bits (78), Expect = 0.059 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +1 Query: 100 QSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVDRSSIRFQ 279 Q RLP P RY+L L P+L + TF G TR ++L++ + SS+ F Sbjct: 165 QIRLPTAIIPQRYELSLHPNLTSMTFRGSVTISLQALQDTRDIILHSTGHNI--SSVTFM 222 Query: 280 DWAPTEVVQFE 312 ++ Q E Sbjct: 223 SAVSSQEKQVE 233
>LCAP_HUMAN (Q9UIQ6) Leucyl-cystinyl aminopeptidase (EC 3.4.11.3) (Cystinyl| aminopeptidase) (Oxytocinase) (OTase) (Insulin-regulated membrane aminopeptidase) (Insulin-responsive aminopeptidase) (IRAP) (Placental leucine aminopeptidase) (P-LAP) Length = 1025 Score = 33.5 bits (75), Expect = 0.13 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = +1 Query: 100 QSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVDR 261 Q RLP PLRY+L L P+L + TF G T ++L++ + R Sbjct: 165 QIRLPTAVVPLRYELSLHPNLTSMTFRGSVTISVQALQVTWNIILHSTGHNISR 218
>APE1_SCHPO (Q9USX1) Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)| Length = 882 Score = 33.5 bits (75), Expect = 0.13 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Frame = +1 Query: 79 SPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVD 258 S E + ++ LP+ +P+ YDL L PDL T+ G + + L+ L + Sbjct: 10 SKEDDKNRNLLPKNVKPIHYDLSLYPDLETFTYGGKVVVTLDVLEDSNSITLHGINLRIL 69 Query: 259 RSSIRFQDWAPTEVVQFE---EDEILVLGIGRELP 354 +++ +W V E DE +VL +P Sbjct: 70 TAAL---EWGSQTVWASEVSYGDERIVLQFPSTVP 101
>AMPE_RAT (P50123) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP)| (Aminopeptidase A) (APA) Length = 945 Score = 32.3 bits (72), Expect = 0.29 Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 11/95 (11%) Frame = +1 Query: 10 CVQKNLPRPSTPP-----------LQICPPTMAESPEQFRGQSRLPRFAEPLRYDLVLSP 156 C P PS PP +CP + ES E RLP F +P+ YDL + Sbjct: 43 CEPGTTPAPSNPPPHTSTALPPQDQNVCPDSDDESGEW--KNFRLPDFIQPVHYDLEVKV 100 Query: 157 DLAACTFSGXXXXXXXXXXPTRFLVLNAAELAVDR 261 + ++G TR L L+ E + + Sbjct: 101 LMEEDRYTGIVSISVNLSKDTRDLWLHIRETRITK 135
>APE2_YEAST (P32454) Aminopeptidase 2 (EC 3.4.11.-) (Aminopeptidase II) (AP-II)| (YscII) Length = 844 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = +1 Query: 109 LPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPT-RFLVLNAAELAVDRSSIRFQDW 285 LP PL YDL + PD F G P + LN + D S + D Sbjct: 11 LPDNVVPLHYDLTVEPDFKTFKFEGSVKIELKINNPAIDTVTLNTVD--TDIHSAKIGDV 68 Query: 286 APTEVVQFEEDEI 324 +E++ EE ++ Sbjct: 69 TSSEIISEEEQQV 81
>CLD12_PONPY (Q5R9K1) Claudin-12| Length = 244 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 7 YCVQKNLPRPSTPPLQICPPTMAESPEQFRGQSRL 111 YC K+LP P PL PP+M + + +SRL Sbjct: 196 YCTCKSLPSPFWQPLYSHPPSMHTYSQPYSARSRL 230
>CLD12_HUMAN (P56749) Claudin-12| Length = 244 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 7 YCVQKNLPRPSTPPLQICPPTMAESPEQFRGQSRL 111 YC K+LP P PL PP+M + + +SRL Sbjct: 196 YCTCKSLPSPFWQPLYSHPPSMHTYSQPYSARSRL 230
>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1| Length = 283 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = +1 Query: 25 LPRPSTPPLQICPPT--MAESPEQFRGQSRLPRFAEPLR 135 +PR +PP ++ PP SP + R +SR PR P+R Sbjct: 224 MPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 262
>RUM1_SCHPO (P40380) Protein rum1 (p25-rum1)| Length = 230 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = +1 Query: 34 PSTPPLQ-ICPPTMAESPEQFRG 99 PSTPP++ +C P+ ESP F+G Sbjct: 3 PSTPPMRGLCTPSTPESPGSFKG 25
>AAP1_YEAST (P37898) Alanine/arginine aminopeptidase (EC 3.4.11.-)| Length = 856 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 109 LPRFAEPLRYDLVLSPDLAACTFSG 183 LP PL YD+ L P+ A TF G Sbjct: 6 LPNNVTPLHYDITLEPNFRAFTFEG 30
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +1 Query: 28 PRPSTPPLQICPPT--MAESPEQFRGQSRLPRFAEPLR 135 PR +PP ++ PP SP + R +SR PR P+R Sbjct: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 284
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +1 Query: 28 PRPSTPPLQICPPT--MAESPEQFRGQSRLPRFAEPLR 135 PR +PP ++ PP SP + R +SR PR P+R Sbjct: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 284
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +1 Query: 28 PRPSTPPLQICPPT--MAESPEQFRGQSRLPRFAEPLR 135 PR +PP ++ PP SP + R +SR PR P+R Sbjct: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 284
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +1 Query: 28 PRPSTPPLQICPPT--MAESPEQFRGQSRLPRFAEPLR 135 PR +PP ++ PP SP + R +SR PR P+R Sbjct: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 284
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +1 Query: 28 PRPSTPPLQICPPT--MAESPEQFRGQSRLPRFAEPLR 135 PR +PP ++ PP SP + R +SR PR P+R Sbjct: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 284
>GC3_MOUSE (P22436) Ig gamma-3 chain C region, secreted form| Length = 329 Score = 28.5 bits (62), Expect = 4.2 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 13 VQKNLPRPSTPPLQICPP 66 ++ +P+PSTPP CPP Sbjct: 96 IEPRIPKPSTPPGSSCPP 113
>GC3M_MOUSE (P03987) Ig gamma-3 chain C region, membrane-bound form| Length = 398 Score = 28.5 bits (62), Expect = 4.2 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 13 VQKNLPRPSTPPLQICPP 66 ++ +P+PSTPP CPP Sbjct: 96 IEPRIPKPSTPPGSSCPP 113
>AMPN_ACEPA (Q10736) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide| hydrolase) (Fragment) Length = 355 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +1 Query: 55 ICPPTMAESPEQF-RGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRFLV 231 + P AE F R +LP+ P+ Y + +S D+ +G PT + Sbjct: 16 LAAPVCAEQVFSFQRAAGQLPKTVVPVSYGINISTDIDNLKLTGQETIQVDVRTPTEDVT 75 Query: 232 LNAAEL 249 LN A L Sbjct: 76 LNQAGL 81
>R3HD1_HUMAN (Q15032) R3H domain-containing protein 1| Length = 1099 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +1 Query: 31 RPSTPPLQICPPTMAESPEQFRGQSRLPRFAEPLRYD 141 RPS PPL I P + +G SR P +PL+Y+ Sbjct: 905 RPSGPPLSIM-PQFSRPFVPGQGDSRYPLLGQPLQYN 940
>O10H4_HUMAN (Q8NGA5) Olfactory receptor 10H4| Length = 316 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%) Frame = +1 Query: 97 GQSRLPRFAEPLRYDLVLSP----DLAACTFSG 183 G R PLRY++++SP L ACT++G Sbjct: 120 GYDRYVAICHPLRYNVLMSPRDCAHLVACTWAG 152
>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (dTopors) Length = 1038 Score = 27.3 bits (59), Expect = 9.4 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = +1 Query: 46 PLQICPPTMAESPEQFRGQSRLPRFAEPLRYDLVLSPDLAACTFSGXXXXXXXXXXPTRF 225 P+Q P E+P R PR+ ++ V+ D+ A +G Sbjct: 161 PVQTTSPVPTENPSLRYHIVRRPRYTPLVQNQAVIVNDIEAAIAAGAAGED--------- 211 Query: 226 LVLNAAELAVDRSSI-RFQDWAPTEVVQFEEDE 321 VL+AAE+A R S RF+ + + ++ D+ Sbjct: 212 -VLSAAEVAAGRRSYSRFEPYRSELMNYYQHDQ 243
>AMPN_HAECO (Q10737) Aminopeptidase N (EC 3.4.11.2) (Microsomal aminopeptidase)| (Membrane glycoprotein H11) Length = 971 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 9/58 (15%) Frame = +1 Query: 109 LPRFAEPLRYDLVLS---------PDLAACTFSGXXXXXXXXXXPTRFLVLNAAELAV 255 LP +PL YDL + P TF G PT+ +VLN+ +++V Sbjct: 70 LPSNIKPLSYDLTIKTYLPGYVDFPPEKNLTFDGRVEISMVVIEPTKSIVLNSKKISV 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,674,641 Number of Sequences: 219361 Number of extensions: 306190 Number of successful extensions: 1585 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1582 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
