Clone Name | bastl10f05 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 32 cggaggagccagtccacc 49 |||||||||||||||||| Sbjct: 10739070 cggaggagccagtccacc 10739053
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence Length = 221724 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 tcgggggagcttcaaccc 26 |||||||||||||||||| Sbjct: 141100 tcgggggagcttcaaccc 141117
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 32 cggaggagccagtccacc 49 |||||||||||||||||| Sbjct: 155984 cggaggagccagtccacc 155967
>emb|AL589932.8| Human DNA sequence from clone RP11-200E19 on chromosome 6, complete sequence Length = 37752 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 34 gaggagccagtccaccct 51 |||||||||||||||||| Sbjct: 15565 gaggagccagtccaccct 15548
>gb|AC159255.3| Mus musculus BAC clone RP24-89C11 from chromosome 3, complete sequence Length = 216011 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 tcgggggagcttcaaccc 26 |||||||||||||||||| Sbjct: 30790 tcgggggagcttcaaccc 30807
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 32 cggaggagccagtccacc 49 |||||||||||||||||| Sbjct: 10737171 cggaggagccagtccacc 10737154
>dbj|AB012807.2| Mus musculus Ugcg gene for UDP-glucose ceramide glucosyltransferase, complete cds Length = 3117 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 ccaaatccggaggagcca 42 |||||||||||||||||| Sbjct: 82 ccaaatccggaggagcca 65
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 gcgccgaatcgggggagc 18 |||||||||||||||||| Sbjct: 2854124 gcgccgaatcgggggagc 2854107
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 36.2 bits (18), Expect = 6.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 10 cgggggagcttcaacccaaatc 31 |||||||||||||| ||||||| Sbjct: 52121 cgggggagcttcaaaccaaatc 52100
>emb|AL808112.34| Mouse DNA sequence from clone RP23-57N22 on chromosome 4, complete sequence Length = 236158 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 ccaaatccggaggagcca 42 |||||||||||||||||| Sbjct: 73296 ccaaatccggaggagcca 73279
>dbj|AK113242.1| Ciona intestinalis cDNA, clone:ciad019c13, full insert sequence Length = 1378 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 gagcttcaacccaaatcc 32 |||||||||||||||||| Sbjct: 876 gagcttcaacccaaatcc 859 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 228,186 Number of Sequences: 3902068 Number of extensions: 228186 Number of successful extensions: 54297 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54220 Number of HSP's gapped (non-prelim): 77 length of query: 51 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 31 effective length of database: 17,155,003,908 effective search space: 531805121148 effective search space used: 531805121148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)