Clone Name | bastl10f03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome... | 40 | 0.88 | 2 | gb|CP000249.1| Frankia sp. CcI3, complete genome | 40 | 0.88 | 3 | dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... | 40 | 0.88 | 4 | emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... | 38 | 3.5 |
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>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 0.88 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggggagatcggagacgacg 75 |||||||||||||||||||| Sbjct: 31097 cggggagatcggagacgacg 31116
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 0.88 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cttgcgcttgcggcggggag 62 |||||||||||||||||||| Sbjct: 933224 cttgcgcttgcggcggggag 933205
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 0.88 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggggagatcggagacgacg 75 |||||||||||||||||||| Sbjct: 26749158 cggggagatcggagacgacg 26749177
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 38.2 bits (19), Expect = 3.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 cggagacgacgacgctgtc 83 ||||||||||||||||||| Sbjct: 96168 cggagacgacgacgctgtc 96186 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 333,046 Number of Sequences: 3902068 Number of extensions: 333046 Number of successful extensions: 23106 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23036 Number of HSP's gapped (non-prelim): 70 length of query: 83 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 62 effective length of database: 17,151,101,840 effective search space: 1063368314080 effective search space used: 1063368314080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)