ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl10f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY439177.1| Drosophila subobscura troponin 5 (TpnT) mRNA, partial cds, alternatively spliced Length = 1232 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaagagaaggc 46 ||||||||||||||||||||| ||| |||| Sbjct: 1169 ggaggtcgtcgaggaggaggatgaggaggc 1198
>gb|AY439176.1| Drosophila subobscura troponin T-4 (TpnT) mRNA, partial cds, alternatively spliced Length = 1163 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaagagaaggc 46 ||||||||||||||||||||| ||| |||| Sbjct: 1100 ggaggtcgtcgaggaggaggatgaggaggc 1129
>gb|AY439175.1| Drosophila subobscura troponin T-3 (TpnT) mRNA, partial cds, alternatively spliced Length = 1205 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaagagaaggc 46 ||||||||||||||||||||| ||| |||| Sbjct: 1142 ggaggtcgtcgaggaggaggatgaggaggc 1171
>gb|AY439174.1| Drosophila subobscura troponin T-2 (TpnT) mRNA, partial cds, alternatively spliced Length = 1229 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaagagaaggc 46 ||||||||||||||||||||| ||| |||| Sbjct: 1166 ggaggtcgtcgaggaggaggatgaggaggc 1195
>gb|AY439173.1| Drosophila subobscura troponin T-1 (TpnT) mRNA, partial cds, alternatively spliced Length = 1232 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaagagaaggc 46 ||||||||||||||||||||| ||| |||| Sbjct: 1169 ggaggtcgtcgaggaggaggatgaggaggc 1198
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 cgggcggcgcggccgcgggcgc 74 |||||||||||||||||||||| Sbjct: 2543357 cgggcggcgcggccgcgggcgc 2543378
>ref|NM_144604.2| Homo sapiens conserved nuclear protein NHN1 (NHN1), mRNA Length = 3572 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 3307 gaggaggaggaagagaaggcgg 3286
>ref|XM_548979.2| PREDICTED: Canis familiaris similar to ELK1 protein (LOC491860), mRNA Length = 1533 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 ctgcggagggcgtgccggcccg 349 |||||||||||||||||||||| Sbjct: 1070 ctgcggagggcgtgccggcccg 1091
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 34983 gaggaggaggaagagaaggcgg 35004
>gb|BC050463.1| Homo sapiens conserved nuclear protein NHN1, mRNA (cDNA clone MGC:54295 IMAGE:6042036), complete cds Length = 3572 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 3307 gaggaggaggaagagaaggcgg 3286
>gb|BC001584.1| Homo sapiens conserved nuclear protein NHN1, mRNA (cDNA clone IMAGE:3461401), partial cds Length = 2837 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 2456 gaggaggaggaagagaaggcgg 2435
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 cgggcggcgcggccgcgggcgc 74 |||||||||||||||||||||| Sbjct: 723402 cgggcggcgcggccgcgggcgc 723423
>dbj|AK093394.1| Homo sapiens cDNA FLJ36075 fis, clone TESTI2019729 Length = 1798 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 1612 gaggaggaggaagagaaggcgg 1591
>emb|CR601060.1| full-length cDNA clone CS0DI036YM07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1565 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 1228 gaggaggaggaagagaaggcgg 1207
>dbj|AK056632.1| Homo sapiens cDNA FLJ32070 fis, clone OCBBF1000119 Length = 3057 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 2807 gaggaggaggaagagaaggcgg 2786
>tpg|BK001654.1| TPA: TPA_inf: Drosophila pseudoobscura troponin T (TpnT) gene, complete cds, alternatively spliced Length = 9593 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaagagaaggc 46 ||||||||||||||||||||| ||| |||| Sbjct: 9148 ggaggtcgtcgaggaggaggatgaggaggc 9177
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 cgggcggcgcggccgcgggcgc 74 |||||||||||||||||||||| Sbjct: 454284 cgggcggcgcggccgcgggcgc 454305
>dbj|AK026317.1| Homo sapiens cDNA: FLJ22664 fis, clone HSI08202 Length = 1271 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcgg 48 |||||||||||||||||||||| Sbjct: 887 gaggaggaggaagagaaggcgg 866
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 14 gctggaggtcgtcgaggaggaggaagagaa 43 |||||||||||| | ||||||||||||||| Sbjct: 2872530 gctggaggtcgtggtggaggaggaagagaa 2872501
>gb|AC111097.10| Mus musculus chromosome 3, clone RP23-174G7, complete sequence Length = 206043 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 67553 gtcgaggaggaggaagaggaggcgg 67577
>gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, complete sequence Length = 173365 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aggaggaggaagagaaggcgg 48 ||||||||||||||||||||| Sbjct: 102947 aggaggaggaagagaaggcgg 102927
>ref|NM_178655.3| Mus musculus ankyrin 2, brain (Ank2), transcript variant 2, mRNA Length = 5790 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 3535 gagatctcgctggaggtcgtc 3515
>ref|NM_001034168.1| Mus musculus ankyrin 2, brain (Ank2), transcript variant 3, mRNA Length = 5487 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 3232 gagatctcgctggaggtcgtc 3212
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 gatgcggacgcggcgccggcgggcg 106 ||||||||||||||| ||||||||| Sbjct: 2526481 gatgcggacgcggcggcggcgggcg 2526457 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cgcggcgccggcgggcgcgcacag 113 |||||||||||||| ||||||||| Sbjct: 1418420 cgcggcgccggcggccgcgcacag 1418397
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcg 47 ||||||||||||||||||||| Sbjct: 28754 gaggaggaggaagagaaggcg 28774
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 gacgacggcggcgcccgtggc 391 ||||||||||||||||||||| Sbjct: 13982721 gacgacggcggcgcccgtggc 13982741 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 22061803 gcggcgccggcgggcgcgca 22061822
>gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 aggaggaggaagagaaggcgg 48 ||||||||||||||||||||| Sbjct: 41381 aggaggaggaagagaaggcgg 41361
>ref|XM_983845.1| PREDICTED: Mus musculus hypothetical LOC626575 (LOC626575), mRNA Length = 3101 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 793 ggcggcgcggccgcgggcgcc 773
>ref|XM_984811.1| PREDICTED: Mus musculus PR domain containing 2, with ZNF domain, transcript variant 2 (Prdm2), mRNA Length = 9383 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 16 ggcggcgcggccgcgggcgcc 36
>ref|XM_984784.1| PREDICTED: Mus musculus PR domain containing 2, with ZNF domain, transcript variant 1 (Prdm2), mRNA Length = 5680 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 16 ggcggcgcggccgcgggcgcc 36
>ref|XM_898822.2| PREDICTED: Mus musculus PR domain containing 2, with ZNF domain, transcript variant 2 (Prdm2), mRNA Length = 9383 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 16 ggcggcgcggccgcgggcgcc 36
>ref|XM_899431.2| PREDICTED: Mus musculus hypothetical LOC626575 (LOC626575), mRNA Length = 3101 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 793 ggcggcgcggccgcgggcgcc 773
>ref|XM_992478.1| PREDICTED: Mus musculus hypothetical protein LOC676728 (LOC676728), mRNA Length = 3098 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 794 ggcggcgcggccgcgggcgcc 774
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gtcgtcgaggaggaggaagag 41 ||||||||||||||||||||| Sbjct: 32135 gtcgtcgaggaggaggaagag 32115
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 gacgacggcggcgcccgtggc 391 ||||||||||||||||||||| Sbjct: 28761 gacgacggcggcgcccgtggc 28741
>gb|AC098724.3| Mus musculus BAC clone RP23-3D14 from 4, complete sequence Length = 190437 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 64942 ggcggcgcggccgcgggcgcc 64922
>gb|BC021873.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:28064 IMAGE:3709271), complete cds Length = 1145 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 721 gtcgaggaggaggaagaggaggcgg 745
>emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chromosome 1 Contains the 3' end of the gene for lung type-I cell membrane-associated glycoprotein (T1A-2), a novel gene, the 5' end of the PRDM2 gene for PR domain containing 2 with ZNF domain and a CpG island, complete sequence Length = 111182 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 95465 ggcggcgcggccgcgggcgcc 95485
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 gatgcggacgcggcgccggcgggcg 106 ||||||||||||||| ||||||||| Sbjct: 1856160 gatgcggacgcggcggcggcgggcg 1856184 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cgcggcgccggcgggcgcgcacag 113 |||||||||||||| ||||||||| Sbjct: 1290354 cgcggcgccggcggccgcgcacag 1290331
>gb|BC059251.1| Mus musculus ankyrin 2, brain, mRNA (cDNA clone MGC:67574 IMAGE:6405358), complete cds Length = 4997 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 3486 gagatctcgctggaggtcgtc 3466
>gb|AC011131.6| Homo sapiens chromosome 8, clone RP11-351E7, complete sequence Length = 178705 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcggc 49 ||||||||||||||||||||| Sbjct: 113115 ggaggaggaagagaaggcggc 113135
>gb|AF472587.1| Homo sapiens RIZ1 tumor suppressor (PRDM2) gene, promoter region and exon 1 Length = 980 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 566 ggcggcgcggccgcgggcgcc 586
>ref|NM_001024306.1| Rattus norvegicus similar to nucleolar protein family A, member 1 (LOC499709), mRNA Length = 1386 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 817 gtcgaggaggaggaagaggaggcgg 841
>dbj|AK167001.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0027D03 product:nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), full insert sequence Length = 1005 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 597 gtcgaggaggaggaagaggaggcgg 621
>dbj|AK087820.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330024L24 product:hypothetical SET-domain of transcriptional regulators (TRX, EZ, ASH1 etc)/SET domain profile containing protein, full insert sequence Length = 618 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 17 ggcggcgcggccgcgggcgcc 37
>dbj|AK083826.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130017A12 product:ankyrin 2, brain, full insert sequence Length = 3327 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 1791 gagatctcgctggaggtcgtc 1771
>dbj|AK032060.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330566N20 product:partly similar to ANKYRIN 2, full insert sequence Length = 5075 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 3535 gagatctcgctggaggtcgtc 3515
>dbj|AK050264.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730031I06 product:unclassifiable, full insert sequence Length = 2359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 131 gagatctcgctggaggtcgtc 111
>gb|BC079131.1| Rattus norvegicus similar to nucleolar protein family A, member 1, mRNA (cDNA clone MGC:94141 IMAGE:7127379), complete cds Length = 1386 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 817 gtcgaggaggaggaagaggaggcgg 841
>dbj|AK075923.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400008K01 product:nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 592 gtcgaggaggaggaagaggaggcgg 616
>dbj|AK021256.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430047J18 product:nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), full insert sequence Length = 1024 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 618 gtcgaggaggaggaagaggaggcgg 642
>gb|BC043123.1| Mus musculus ankyrin 2, brain, mRNA (cDNA clone IMAGE:6409416), partial cds Length = 5490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 3232 gagatctcgctggaggtcgtc 3212
>dbj|AK030136.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932702H24 product:unclassifiable, full insert sequence Length = 3043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 735 ggcggcgcggccgcgggcgcc 715
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 gacgacggcggcgcccgtggc 391 ||||||||||||||||||||| Sbjct: 13977696 gacgacggcggcgcccgtggc 13977716 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 22054832 gcggcgccggcgggcgcgca 22054851
>gb|AC017053.8| Homo sapiens BAC clone RP11-339D8 from 2, complete sequence Length = 181952 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcg 47 ||||||||||||||||||||| Sbjct: 4874 gaggaggaggaagagaaggcg 4854
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 4713855 ggcggcgcggccgcgggcgcc 4713835 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gcggcgcggccgcgggcgccc 76 ||||||||||||||||||||| Sbjct: 266552 gcggcgcggccgcgggcgccc 266532 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cggcgggcgcgcacaggtcg 117 |||||||||||||||||||| Sbjct: 2838466 cggcgggcgcgcacaggtcg 2838485
>ref|XM_227735.3| PREDICTED: Rattus norvegicus ankyrin 2, neuronal (predicted) (Ank2_predicted), mRNA Length = 1547 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 1009 gagatctcgctggaggtcgtc 989
>gb|BC048685.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:59268 IMAGE:6510731), complete cds Length = 1209 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 776 gtcgaggaggaggaagaggaggcgg 800
>ref|NM_026578.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) (Nola1), mRNA Length = 1024 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcgg 48 |||||||||||||||||| |||||| Sbjct: 618 gtcgaggaggaggaagaggaggcgg 642
>gb|AY495827.1| Oryctolagus cuniculus clone 179L1 kappa 1 light chain immunglobulin gene region Length = 205144 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ggaggtcgtcgaggaggagga 37 ||||||||||||||||||||| Sbjct: 150676 ggaggtcgtcgaggaggagga 150656
>gb|AC102591.14| Mus musculus chromosome 3, clone RP23-336B10, complete sequence Length = 216906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gagatctcgctggaggtcgtc 26 ||||||||||||||||||||| Sbjct: 16989 gagatctcgctggaggtcgtc 16969
>gb|AC167717.3| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16721157J10, complete sequence Length = 33881 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ggaggtcgtcgaggaggagga 37 ||||||||||||||||||||| Sbjct: 9954 ggaggtcgtcgaggaggagga 9934
>emb|AL611982.26| Mouse DNA sequence from clone RP23-348F1 on chromosome 4, complete sequence Length = 171559 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 38 ggcggcgcggccgcgggcgcc 18
>gb|U17837.1|RRU17837 Rattus sp. zinc finger protein RIZ mRNA, complete cds Length = 6152 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 12 ggcggcgcggccgcgggcgcc 32
>emb|AL606915.12| Mouse DNA sequence from clone RP23-185C16 on chromosome 4, complete sequence Length = 182248 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgcc 75 ||||||||||||||||||||| Sbjct: 180286 ggcggcgcggccgcgggcgcc 180266
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 192743 gaggaggaggaagagaaggc 192762
>ref|XM_549983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 803 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 669 cgaggaggaggaagagaagg 688
>ref|NM_184178.2| Oryza sativa (japonica cultivar-group), mRNA Length = 830 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 66 cgaggaggaggaagagaagg 47
>ref|XM_529689.1| PREDICTED: Pan troglodytes LOC453485 (LOC453485), mRNA Length = 700 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggcgcccacccggatgcggacgcg 93 ||||||| |||||||||||||||| Sbjct: 379 ggcgccctcccggatgcggacgcg 402
>ref|XM_483469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ggaggtcgtcgaggaggagg 36 |||||||||||||||||||| Sbjct: 1262 ggaggtcgtcgaggaggagg 1243
>ref|XM_480123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 522 cgaggaggaggaagagaagg 541
>gb|DQ214174.1| Taeniopygia guttata clone 0058P0054D01 GCIP-interacting protein p29 variant 3-like mRNA, complete sequence Length = 1118 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||||||| |||||||| Sbjct: 103 gaggaggaggaagaggaggcggca 126
>gb|DQ214173.1| Taeniopygia guttata clone 0058P0047D04 GCIP-interacting protein p29 variant 3-like mRNA, complete sequence Length = 1118 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||||||| |||||||| Sbjct: 103 gaggaggaggaagaggaggcggca 126
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 cgtgccggcccgcgccactcgcgc 361 |||||||||||||||||| ||||| Sbjct: 1446608 cgtgccggcccgcgccacccgcgc 1446585
>ref|NM_002856.1| Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B) (PVRL2), mRNA Length = 1928 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1470 gaggaggaggaagagaaggc 1489
>ref|NM_187725.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 894 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcgtcgaggaggaggaagag 41 |||||||||||||||||||| Sbjct: 98 tcgtcgaggaggaggaagag 117
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaaggcggc 49 |||||||||||| ||||||||||| Sbjct: 52869 cgaggaggaggaggagaaggcggc 52846
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 371 gacgacggcggcgcccgtggccgaggaagagg 402 |||| |||||||||||||||| ||||| |||| Sbjct: 29406 gacggcggcggcgcccgtggcggaggaggagg 29375
>gb|BC003091.1| Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B), mRNA (cDNA clone MGC:1349 IMAGE:3503222), complete cds Length = 1968 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1519 gaggaggaggaagagaaggc 1538
>gb|AC016023.8| Drosophila melanogaster clone BACR16F16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcggca 50 |||| ||||||||||||||||||| Sbjct: 158501 gagggggaggaagagaaggcggca 158478
>gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complete sequence Length = 189254 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcggca 50 |||| ||||||||||||||||||| Sbjct: 23296 gagggggaggaagagaaggcggca 23273
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgc 74 |||||||||||||||||||| Sbjct: 144342 ggcggcgcggccgcgggcgc 144323
>gb|AC126600.6| Mus musculus chromosome 1, clone RP23-145J9, complete sequence Length = 219130 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 aggaggaggaagagaaggcg 47 |||||||||||||||||||| Sbjct: 86591 aggaggaggaagagaaggcg 86572
>gb|DQ493964.1| Musa acuminata TPR domain protein mRNA, partial cds Length = 230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 139 cgaggaggaggaagagaagg 158
>ref|XM_867463.1| PREDICTED: Bos taurus similar to Pleckstrin homology domain-containing protein family B member 2 (Evectin-2) (LOC615601), mRNA Length = 840 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcctgtggctgctccggcca 138 |||||||||||||||||||| Sbjct: 807 gcctgtggctgctccggcca 788 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gcctgtggctgctccggcca 210 |||||||||||||||||||| Sbjct: 807 gcctgtggctgctccggcca 788
>ref|XM_591153.2| PREDICTED: Bos taurus similar to pleckstrin homology domain containing, family B (evectins) member 2 (LOC513469), mRNA Length = 947 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gcctgtggctgctccggcca 210 |||||||||||||||||||| Sbjct: 633 gcctgtggctgctccggcca 614 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcctgtggctgctccggcca 138 |||||||||||||||||||| Sbjct: 633 gcctgtggctgctccggcca 614
>ref|XM_584628.2| PREDICTED: Bos taurus similar to Ras-related GTP binding C (LOC507930), mRNA Length = 4010 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||||||| |||||||| Sbjct: 157 gaggaggaggaagaggaggcggca 180
>ref|XM_869613.1| PREDICTED: Bos taurus similar to Ras-related GTP binding C (LOC617367), partial mRNA Length = 1231 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||||||| |||||||| Sbjct: 277 gaggaggaggaagaggaggcggca 300
>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence Length = 242418 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 237463 ccgggcggcgctgccgcgggcgcc 237440
>gb|AC126426.3| Mus musculus BAC clone RP24-291G13 from chromosome 13, complete sequence Length = 201051 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 79661 cgaggaggaggaagagaagg 79642
>ref|XM_854787.1| PREDICTED: Canis familiaris similar to Non-muscle caldesmon (CDM) (L-caldesmon), transcript variant 2 (LOC608135), mRNA Length = 2482 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 807 gaggaggaggaagagaaggc 826
>ref|XM_844739.1| PREDICTED: Canis familiaris similar to Non-muscle caldesmon (CDM) (L-caldesmon), transcript variant 1 (LOC608135), mRNA Length = 2407 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 807 gaggaggaggaagagaaggc 826
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 7491 ccgggcggcgctgccgcgggcgcc 7468
>gb|AC125526.4| Mus musculus BAC clone RP24-498L21 from chromosome 15, complete sequence Length = 178670 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 128047 gaggaggaggaagagaaggc 128066
>emb|CR731764.2|CNS0GRKP Tetraodon nigroviridis full-length cDNA Length = 835 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 749 gaggaggaggaagagaaggc 768
>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence Length = 215781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 208887 cgaggaggaggaagagaagg 208868
>ref|XM_862733.1| PREDICTED: Canis familiaris similar to sorting nexin associated golgi protein 1, transcript variant 3 (LOC610530), mRNA Length = 3314 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gggcggcgcggccgcgggcgccca 77 ||||||||| |||||||||||||| Sbjct: 586 gggcggcgccgccgcgggcgccca 563
>ref|XM_862724.1| PREDICTED: Canis familiaris similar to sorting nexin associated golgi protein 1, transcript variant 2 (LOC610530), mRNA Length = 3224 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gggcggcgcggccgcgggcgccca 77 ||||||||| |||||||||||||| Sbjct: 496 gggcggcgccgccgcgggcgccca 473
>ref|XM_848613.1| PREDICTED: Canis familiaris similar to sorting nexin associated golgi protein 1, transcript variant 1 (LOC610530), mRNA Length = 3347 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gggcggcgcggccgcgggcgccca 77 ||||||||| |||||||||||||| Sbjct: 619 gggcggcgccgccgcgggcgccca 596
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||| |||||||||||| Sbjct: 161041 gaggaggaggaggagaaggcggca 161018
>gb|AC123687.20| Mus musculus chromosome 5, clone RP23-314A12, complete sequence Length = 189230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 50224 gaggaggaggaagagaaggc 50205
>gb|BC052201.1| Homo sapiens cDNA clone IMAGE:5295173, **** WARNING: chimeric clone **** Length = 3850 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 494 ggaggaggaagagaaggcgg 513
>ref|XM_777535.1| PREDICTED: Strongylocentrotus purpuratus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC577299), mRNA Length = 2824 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tggaggtcgtcgaggaggaggaag 39 ||||||| |||||||||||||||| Sbjct: 732 tggaggtggtcgaggaggaggaag 755
>gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin biosynthesis gene cluster, partial sequence Length = 17455 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gacggcggcgcccgtggccg 393 |||||||||||||||||||| Sbjct: 14525 gacggcggcgcccgtggccg 14544
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gacgcggcgccggcgggcgcgcacaggt 115 |||||||||| |||||||||||| |||| Sbjct: 28056 gacgcggcgcaggcgggcgcgcaaaggt 28083
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gacgcggcgccggcgggcgcgcacaggt 115 |||||||||| |||||||||||| |||| Sbjct: 291917 gacgcggcgcaggcgggcgcgcaaaggt 291944
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gacgcggcgccggcgggcgcgcacaggt 115 |||||||||| |||||||||||| |||| Sbjct: 263003 gacgcggcgcaggcgggcgcgcaaaggt 263030
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 137910 gcggcgcggccgcgggcgcc 137891
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggagg 36 |||||||||||||||||||| Sbjct: 100968 ggaggtcgtcgaggaggagg 100987
>emb|AL732556.7| Mouse DNA sequence from clone RP24-144L11 on chromosome 4 Contains the Tnc gene for tenascin C, the 5' end of a novel gene and a novel gene, complete sequence Length = 148021 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 103414 gaggaggaggaagagaaggc 103395
>gb|BC028647.1| Mus musculus TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone MGC:41377 IMAGE:1244243), complete cds Length = 2032 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 1812 ccgggcggcgctgccgcgggcgcc 1835
>emb|AJ251438.1|STE251438 Streptomyces tendae Tue901 nikI gene, nikJ gene, nikK gene, nikL gene, nikM gene, nikN gene, nikO gene, ORF1 and ORF2 Length = 11591 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 6650 gcggcgcggccgcgggcgcc 6631
>emb|AJ132742.1|BBR132742 Bordetella bronchiseptica metY (partial) and hupB genes and ORF1 Length = 2384 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gacgcggcgccggcgggcgcgcacaggt 115 |||||||||| |||||||||||| |||| Sbjct: 1366 gacgcggcgcaggcgggcgcgcaaaggt 1393
>emb|AJ132741.1|BPE132741 Bordetella pertussis hupB, tonB, exbB, exbD and basR genes and ORF1 (partial) Length = 4439 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gacgcggcgccggcgggcgcgcacaggt 115 |||||||||| |||||||||||| |||| Sbjct: 281 gacgcggcgcaggcgggcgcgcaaaggt 308
>gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, complete sequence Length = 155742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 40320 cgaggaggaggaagagaagg 40301
>gb|AC009381.10| Drosophila melanogaster 3L BAC RP98-13N10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167816 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaaga 40 ||||| |||||||||||||||||| Sbjct: 116686 ggaggccgtcgaggaggaggaaga 116709
>dbj|AK127965.1| Homo sapiens cDNA FLJ46079 fis, clone TESTI2004601, weakly similar to Homo sapiens NYD-TSPG protein (NYD-TSPG) Length = 1777 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 494 ggaggaggaagagaaggcgg 513
>emb|CR625208.1| full-length cDNA clone CS0DI083YH23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1916 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1509 gaggaggaggaagagaaggc 1528
>emb|CR624532.1| full-length cDNA clone CS0DI044YI13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1264 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 874 gaggaggaggaagagaaggc 893
>emb|CR604055.1| full-length cDNA clone CS0DF024YG22 of Fetal brain of Homo sapiens (human) Length = 1928 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1542 gaggaggaggaagagaaggc 1561
>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence Length = 189590 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aggaggaggaagagaaggcg 47 |||||||||||||||||||| Sbjct: 128982 aggaggaggaagagaaggcg 129001
>emb|CR600069.1| full-length cDNA clone CS0DF034YL11 of Fetal brain of Homo sapiens (human) Length = 1989 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1554 gaggaggaggaagagaaggc 1573
>gb|AC005865.1| Homo sapiens 12 PAC RPCI5-1063M23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 112911 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 82290 gaggaggaggaagagaaggc 82309
>ref|NM_140897.2| Drosophila melanogaster CG8103-RA, transcript variant A (Mi-2), mRNA Length = 6416 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaaga 40 ||||| |||||||||||||||||| Sbjct: 835 ggaggccgtcgaggaggaggaaga 858
>ref|NM_001014591.1| Drosophila melanogaster CG8103-RB, transcript variant B (Mi-2), mRNA Length = 6419 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaaga 40 ||||| |||||||||||||||||| Sbjct: 838 ggaggccgtcgaggaggaggaaga 861
>gb|AC073910.20| Homo sapiens Xp BAC RP11-654E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145400 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 129350 gaggaggaggaagagaaggc 129331
>gb|AC079071.9| Homo sapiens chromosome 8, clone RP11-43G18, complete sequence Length = 157811 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 61185 gaggaggaggaagagaaggc 61204
>dbj|AK136314.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030446M23 product:unclassifiable, full insert sequence Length = 4289 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1792 gaggaggaggaagagaaggc 1811
>dbj|AK142420.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430049N03 product:unclassifiable, full insert sequence Length = 3498 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 3409 gaggaggaggaagagaaggc 3428
>gb|AC021482.10| Homo sapiens chromosome , clone RP11-15K1, complete sequence Length = 159075 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 12188 gaggaggaggaagagaaggc 12169
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcggacgcggcgccggcgggcgcg 108 |||| ||||||||||||||||||| Sbjct: 3377266 gcggccgcggcgccggcgggcgcg 3377289
>gb|AC009086.6| Homo sapiens chromosome 16 clone RP11-368N21, complete sequence Length = 201155 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 105201 cgaggaggaggaagagaagg 105220
>emb|CR456818.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0219D for gene PVRL2, poliovirus receptor-related 2 (herpesvirus entry mediator B); complete cds, incl. stopcodon Length = 1440 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1321 gaggaggaggaagagaaggc 1340
>ref|NM_001029964.2| Homo sapiens tubulin tyrosine ligase-like family, member 13 (TTLL13), mRNA Length = 1793 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 518 ggaggaggaagagaaggcgg 537
>dbj|AK077736.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730573L20 product:unclassifiable, full insert sequence Length = 2260 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 204 ccgggcggcgctgccgcgggcgcc 181
>dbj|AK077149.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933413G21 product:PCAF ASSOCIATED FACTOR 65 ALPHA homolog [Homo sapiens], full insert sequence Length = 2225 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 2029 ccgggcggcgctgccgcgggcgcc 2052
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ggacgcggcgccggcgggcg 106 |||||||||||||||||||| Sbjct: 80971 ggacgcggcgccggcgggcg 80990
>gb|AC133868.10| Mus musculus chromosome 15, clone RP24-430H1, complete sequence Length = 142534 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 42079 gaggaggaggaagagaaggc 42098
>dbj|AK082962.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530024J06 product:unclassifiable, full insert sequence Length = 2477 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 207 ccgggcggcgctgccgcgggcgcc 184
>dbj|AK041085.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530081G18 product:unclassifiable, full insert sequence Length = 1141 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 209 ccgggcggcgctgccgcgggcgcc 186
>dbj|AK085400.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630022E15 product:unclassifiable, full insert sequence Length = 1267 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 180 ccgggcggcgctgccgcgggcgcc 157
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 18349348 gcggcgcggccgcgggcgcc 18349367 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 17875841 gcggcgccggcgggcgcgca 17875860
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 371 gacgacggcggcgcccgtggccgaggaagagg 402 |||| |||||||||||||||| ||||| |||| Sbjct: 4378043 gacggcggcggcgcccgtggcggaggaggagg 4378012
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 cgctggaggtcgtcgaggaggaggaaga 40 |||||||||| |||||||||||||||| Sbjct: 14141073 cgctggaggtgctcgaggaggaggaaga 14141100
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggagg 36 |||||||||||||||||||| Sbjct: 26372696 ggaggtcgtcgaggaggagg 26372715 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 23390967 gcggcgccggcgggcgcgca 23390986 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 2962174 cgaggaggaggaagagaagg 2962155
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 gtcgaggaggaggaagagaaggcg 47 |||||||||||||| ||||||||| Sbjct: 6843276 gtcgaggaggaggaggagaaggcg 6843253
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgc 74 |||||||||||||||||||| Sbjct: 2051473 ggcggcgcggccgcgggcgc 2051454
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcgtcgaggaggaggaagag 41 |||||||||||||||||||| Sbjct: 10201359 tcgtcgaggaggaggaagag 10201340 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 1365368 cgaggaggaggaagagaagg 1365387
>gb|AC011481.4|AC011481 Homo sapiens chromosome 19 clone CTB-129P6, complete sequence Length = 107567 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 21325 gaggaggaggaagagaaggc 21344
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||| |||||||||||| Sbjct: 100408 gaggaggaggaggagaaggcggca 100431
>gb|AC018553.6| Homo sapiens chromosome 16 clone RP11-434E6, complete sequence Length = 172315 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 60539 gaggaggaggaagagaaggc 60558
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 86479 gcggcgccggcgggcgcgca 86460
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ctgcggagcctgttgctgct 275 |||||||||||||||||||| Sbjct: 2864877 ctgcggagcctgttgctgct 2864896
>ref|XM_226365.3| PREDICTED: Rattus norvegicus similar to hypothetical protein (LOC291940), mRNA Length = 5792 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaaggcggc 49 |||||||||||| ||||||||||| Sbjct: 1006 cgaggaggaggaggagaaggcggc 1029
>gb|AC091167.19| Homo sapiens chromosome 15, clone RP11-697E2, complete sequence Length = 202381 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 87813 ggaggaggaagagaaggcgg 87794
>ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, erythroid derived 2, like 3 (predicted) (Nfe2l3_predicted), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||| |||||||||||| Sbjct: 1108 gaggaggaggaggagaaggcggca 1131
>ref|XM_219557.3| PREDICTED: Rattus norvegicus TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (predicted) (Taf6l_predicted), mRNA Length = 2013 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 1813 ccgggcggcgctgccgcgggcgcc 1836
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcgtcgaggaggaggaagag 41 |||||||||||||||||||| Sbjct: 148828 tcgtcgaggaggaggaagag 148809
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcgtcgaggaggaggaagag 41 |||||||||||||||||||| Sbjct: 66673 tcgtcgaggaggaggaagag 66654
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 130042 cgaggaggaggaagagaagg 130023
>gb|AF058448.1|AF058448 Homo sapiens herpesvirus entry protein B (HVEB) mRNA, complete cds Length = 1928 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1470 gaggaggaggaagagaaggc 1489
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 72804 gcggcgccggcgggcgcgca 72823
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ccgggcggcgcggccgcggg 71 |||||||||||||||||||| Sbjct: 2074990 ccgggcggcgcggccgcggg 2075009
>gb|AF228524.1|AF228524 Streptomyces ansochromogenes strain 7100 SanE (sanE) gene, complete cds Length = 593 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 113 gcggcgcggccgcgggcgcc 94
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 63419 cgaggaggaggaagagaagg 63438
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 gtcgaggaggaggaagagaaggcg 47 |||||||||||||| ||||||||| Sbjct: 32801 gtcgaggaggaggaggagaaggcg 32778
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 cgctggaggtcgtcgaggaggaggaaga 40 |||||||||| |||||||||||||||| Sbjct: 120008 cgctggaggtgctcgaggaggaggaaga 120035
>dbj|AP005753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0084L05 Length = 126264 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 cgctggaggtcgtcgaggaggaggaaga 40 |||||||||| |||||||||||||||| Sbjct: 5201 cgctggaggtgctcgaggaggaggaaga 5228
>emb|BX545849.7| Mouse DNA sequence from clone RP23-232N16 on chromosome 4, complete sequence Length = 114104 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 85659 gaggaggaggaagagaaggc 85640
>emb|AL929061.31| Mouse DNA sequence from clone RP23-402A18 on chromosome X, complete sequence Length = 146071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 60140 gaggaggaggaagagaaggc 60159
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggagg 36 |||||||||||||||||||| Sbjct: 22248 ggaggtcgtcgaggaggagg 22267
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 135236 cgaggaggaggaagagaagg 135217
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggagg 36 |||||||||||||||||||| Sbjct: 102277 ggaggtcgtcgaggaggagg 102296
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 12897 cgaggaggaggaagagaagg 12878
>dbj|AK110952.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A02, full insert sequence Length = 995 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 69 gcggcgccggcgggcgcgca 50
>dbj|AK108197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C08, full insert sequence Length = 802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 668 cgaggaggaggaagagaagg 687
>dbj|AK107138.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C12, full insert sequence Length = 1575 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ggaggtcgtcgaggaggagg 36 |||||||||||||||||||| Sbjct: 1262 ggaggtcgtcgaggaggagg 1243
>dbj|AK106618.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-A09, full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcgtcgaggaggaggaagag 41 |||||||||||||||||||| Sbjct: 190 tcgtcgaggaggaggaagag 209
>dbj|AK105791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H06, full insert sequence Length = 1830 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 cgacggcggcgcccgtggcc 392 |||||||||||||||||||| Sbjct: 1414 cgacggcggcgcccgtggcc 1395
>dbj|AK099279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130E04, full insert sequence Length = 830 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 66 cgaggaggaggaagagaagg 47
>dbj|AK068108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131F09, full insert sequence Length = 2665 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 gtcgaggaggaggaagagaaggcg 47 |||||||||||||| ||||||||| Sbjct: 405 gtcgaggaggaggaggagaaggcg 428
>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence Length = 229073 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 16670 gaggaggaggaagagaaggc 16689
>gb|AC154401.2| Mus musculus BAC clone RP23-166O7 from 13, complete sequence Length = 199694 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 175984 cgaggaggaggaagagaagg 175965
>dbj|AK064050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E08, full insert sequence Length = 847 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 65 cgaggaggaggaagagaagg 46
>gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, complete sequence Length = 154587 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcggca 50 |||| ||||||||||||||||||| Sbjct: 91541 gagggggaggaagagaaggcggca 91518
>emb|AL450341.10| Mouse DNA sequence from clone RP23-401L17 on chromosome 2, complete sequence Length = 214573 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 138454 cgaggaggaggaagagaagg 138435
>gb|AF119716.1|AF119716 Drosophila melanogaster dMi-2 protein (dMi-2) mRNA, complete cds Length = 6475 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ggaggtcgtcgaggaggaggaaga 40 ||||| |||||||||||||||||| Sbjct: 836 ggaggccgtcgaggaggaggaaga 859
>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete sequence Length = 256818 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggcggca 50 |||| ||||||||||||||||||| Sbjct: 90860 gagggggaggaagagaaggcggca 90837
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete sequence Length = 234263 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ggaggtcgtcgaggaggaggaaga 40 ||||| |||||||||||||||||| Sbjct: 94086 ggaggccgtcgaggaggaggaaga 94063
>gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhibitor mRNA, complete cds Length = 855 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 40 cgaggaggaggaagagaagg 21
>gb|BC097421.1| Rattus norvegicus dystrophia myotonica-containing WD repeat motif, mRNA (cDNA clone MGC:114467 IMAGE:7454827), complete cds Length = 2352 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 1735 ggaggaggaagagaaggcgg 1754
>gb|AF044965.1|HSPVRR4 Homo sapiens polio virus related protein 2 gene, alpha isoform, exon 6 and partial cds Length = 1370 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 797 gaggaggaggaagagaaggc 816
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcggcaaccgggcggcgcgg 64 |||||||||||||||||||| Sbjct: 3612352 gcggcaaccgggcggcgcgg 3612333
>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence Length = 200040 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 15150 gaggaggaggaagagaaggc 15169
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 371 gacgacggcggcgcccgtggccgaggaagagg 402 |||| |||||||||||||||| ||||| |||| Sbjct: 4386737 gacggcggcggcgcccgtggcggaggaggagg 4386706
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 18275669 gcggcgcggccgcgggcgcc 18275688 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 17802212 gcggcgccggcgggcgcgca 17802231
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 21646 gcggcgcggccgcgggcgcc 21627
>ref|NM_001024748.1| Rattus norvegicus dystrophia myotonica-containing WD repeat motif (Dmwd), mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 1735 ggaggaggaagagaaggcgg 1754
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcggcgcggccgcgggcgcc 75 |||||||||||||||||||| Sbjct: 1249 gcggcgcggccgcgggcgcc 1268
>dbj|AB037899.1| Oryza sativa (japonica cultivar-group) OspolD1 mRNA for OsPol delta large subunit, complete cds Length = 3706 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 gacgacggcggcgcccgtggccgaggaagagg 402 |||| |||||||||||||||| ||||| |||| Sbjct: 164 gacggcggcggcgcccgtggcggaggaggagg 195
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 122663 gcggcgccggcgggcgcgca 122644
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggcgccggcgggcgcgca 110 |||||||||||||||||||| Sbjct: 95039 gcggcgccggcgggcgcgca 95058
>gb|BC036668.1| Homo sapiens cDNA clone IMAGE:4836823, containing frame-shift errors Length = 1812 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 523 ggaggaggaagagaaggcgg 542
>gb|BC020299.1| Mus musculus TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone IMAGE:5065101) Length = 2176 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 1838 ccgggcggcgctgccgcgggcgcc 1861
>ref|NM_146092.1| Mus musculus TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (Taf6l), mRNA Length = 2032 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ccgggcggcgcggccgcgggcgcc 75 ||||||||||| |||||||||||| Sbjct: 1812 ccgggcggcgctgccgcgggcgcc 1835
>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence Length = 202209 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||| |||||||||||| Sbjct: 111828 gaggaggaggaggagaaggcggca 111851
>emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on chromosome 2, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 56326 cgaggaggaggaagagaagg 56345
>emb|AL627328.17| Mouse DNA sequence from clone RP23-299J22 on chromosome 4, complete sequence Length = 229494 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggcggca 50 ||||||||||||||||||| |||| Sbjct: 23706 gaggaggaggaagagaaggaggca 23729
>gb|U19460.1|MMU19460 Mus musculus tenascin gene, promoter region and exon 1 Length = 4271 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 1039 gaggaggaggaagagaaggc 1058
>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete sequence Length = 209914 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 82622 gaggaggaggaagagaaggc 82603
>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete sequence Length = 232834 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 6254 gaggaggaggaagagaaggc 6273
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ggcggcgcggccgcgggcgc 74 |||||||||||||||||||| Sbjct: 18314 ggcggcgcggccgcgggcgc 18295
>dbj|AB072754.1| Macaca fascicularis testis cDNA clone:QtsA-18130, full insert sequence Length = 2331 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggaggaagagaaggcgg 48 |||||||||||||||||||| Sbjct: 1674 ggaggaggaagagaaggcgg 1693
>emb|AL365333.13| Mouse DNA sequence from clone RP21-490L20 on chromosome X, complete sequence Length = 151792 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 268 gaggaggaggaagagaaggc 287
>emb|AL358774.9| Mouse DNA sequence from clone RP21-463A3 on chromosome X, complete sequence Length = 36971 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gaggaggaggaagagaaggc 46 |||||||||||||||||||| Sbjct: 35239 gaggaggaggaagagaaggc 35258
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcgtcgaggaggaggaagag 41 |||||||||||||||||||| Sbjct: 125958 tcgtcgaggaggaggaagag 125939
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgaggaggaggaagagaagg 45 |||||||||||||||||||| Sbjct: 14989 cgaggaggaggaagagaagg 15008 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,981,758 Number of Sequences: 3902068 Number of extensions: 3981758 Number of successful extensions: 171998 Number of sequences better than 10.0: 217 Number of HSP's better than 10.0 without gapping: 222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 166797 Number of HSP's gapped (non-prelim): 5201 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
