>NPHP4_MOUSE (P59240) Nephrocystin-4 (Nephroretinin)|
          Length = 1425

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 56  VSSITPGMLPVNHSVASEGQVKHADGAK-DESSTEQSSAAPTGSVRPLSRE 205
           V  +  G +    S++S+G  +HA+G +    S+ +  A+P+G+  P +R+
Sbjct: 436 VKQVESGTIQFQFSLSSDGPTEHANGPRVGRRSSRKMPASPSGTPAPAARD 486

>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
           protein 1)
          Length = 254

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 92  HSVASEGQVKHADGAKDESSTEQSSAAPTGSVRPLSREKPTA 217
           +S   E  +K  +G    S+   SSAAPT S  P S   PT+
Sbjct: 98  YSSRLEPALKSLNGDASSSAAPSSSAAPTSSAAPSSSAAPTS 139



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +2

Query: 2   LKPNDKDIRSSIQETGLAV--SSITPGM--LPVNHSVASEGQVKHADGAKDESSTEQSSA 169
           LK  + D  SS   +  A   SS  P     P + + +S  + K +  A   S  + SSA
Sbjct: 106 LKSLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSA 165

Query: 170 APTGSVRPLSREKPTA 217
           AP+ S    S   P++
Sbjct: 166 APSSSEAKSSSAAPSS 181

>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 109  GASQTCRWSEGRVKYRAIKCCTNRFCSTLIKGKTYC 216
            G SQ C  +EG ++ RA  C +   C     G + C
Sbjct: 1746 GCSQKCACTEGSIQCRAFHCPSRSHCKLNSNGNSNC 1781

>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)|
          Length = 220

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 101 ASEGQVKHADGAKDESSTEQSSAAPTGSVR 190
           AS  +  +ADG+++ESS+  SSAA   + R
Sbjct: 128 ASSSETINADGSENESSSSSSSAAQNSATR 157

>LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein smell-impaired)|
          Length = 1851

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 53   AVSSITPGMLPVNHSVASEGQVKHADGAKDESSTEQSSAAP 175
            AV + TPG  PV  +VA + Q +     KDE    Q  + P
Sbjct: 1659 AVPASTPGSAPVLPAVAVQTQTQTTSTEKDEEEESQLQSTP 1699

>LIPA3_MOUSE (P60469) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1043

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 131 GAKDESSTEQSSAAPTGSVRP 193
           GAKDESS +   +AP GS+ P
Sbjct: 397 GAKDESSKDWDRSAPAGSIPP 417

>BZTA_RHOCA (Q52663) Glutamate/glutamine/aspartate/asparagine-binding protein|
           bztA precursor
          Length = 338

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 83  PVNHSVASEGQVKHADGAKDESSTEQSSAAPTGSVRP 193
           PVN +  +EGQ K A GA D  +T+ S  A + +  P
Sbjct: 171 PVNIADDAEGQQKFAAGACDSYTTDASGLASSRATLP 207


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,251,065
Number of Sequences: 219361
Number of extensions: 534341
Number of successful extensions: 1513
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)