>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)|
          Length = 942

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
 Frame = +3

Query: 45  EDFLPEGGKLPELS-*SRQAQG-SSPS*EVPKDPRAIRLFD 161
           +DF PEGGKLPE    +RQAQG  S   ++P+DPRA+RLFD
Sbjct: 4   DDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFD 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,726,181
Number of Sequences: 219361
Number of extensions: 471915
Number of successful extensions: 1587
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)