Clone Name | bastl10d05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP000925.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-759M17, complete sequence Length = 177831 Score = 42.1 bits (21), Expect = 0.17 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acaccaggcttgttttcgttcagtg 39 |||||||||||||||| |||||||| Sbjct: 174382 acaccaggcttgtttttgttcagtg 174358
>dbj|AP001781.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-108O10, complete sequence Length = 181022 Score = 42.1 bits (21), Expect = 0.17 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acaccaggcttgttttcgttcagtg 39 |||||||||||||||| |||||||| Sbjct: 25351 acaccaggcttgtttttgttcagtg 25327
>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence Length = 177308 Score = 40.1 bits (20), Expect = 0.67 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 atgtctctacaccaggcttg 26 |||||||||||||||||||| Sbjct: 119573 atgtctctacaccaggcttg 119592
>gb|BC072859.1| Xenopus laevis MGC80259 protein, mRNA (cDNA clone MGC:80259 IMAGE:5073183), complete cds Length = 985 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tgtctctacaccaggcttg 26 ||||||||||||||||||| Sbjct: 526 tgtctctacaccaggcttg 508
>gb|BC091715.1| Xenopus laevis MGC80259 protein, mRNA (cDNA clone MGC:85096 IMAGE:6867616), complete cds Length = 2942 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tgtctctacaccaggcttg 26 ||||||||||||||||||| Sbjct: 2492 tgtctctacaccaggcttg 2474
>dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, complete sequence Length = 124898 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 ttcagtgatcctgaaaaga 51 ||||||||||||||||||| Sbjct: 74102 ttcagtgatcctgaaaaga 74084
>emb|AJ244090.1|SFO244090 Simian foamy virus env gene, partial, isolate agm24 Length = 1794 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 aagaatggcacccccaatg 66 ||||||||||||||||||| Sbjct: 45 aagaatggcacccccaatg 63
>emb|AJ244089.1|SFO244089 Simian foamy virus env gene, partial, isolate agm22 Length = 1794 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 aagaatggcacccccaatg 66 ||||||||||||||||||| Sbjct: 45 aagaatggcacccccaatg 63
>emb|AJ244088.1|SFO244088 Simian foamy virus env gene, partial, isolate agm17 Length = 1794 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 aagaatggcacccccaatg 66 ||||||||||||||||||| Sbjct: 45 aagaatggcacccccaatg 63 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 490,134 Number of Sequences: 3902068 Number of extensions: 490134 Number of successful extensions: 29400 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29391 Number of HSP's gapped (non-prelim): 9 length of query: 68 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 47 effective length of database: 17,151,101,840 effective search space: 806101786480 effective search space used: 806101786480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)