>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I|
          Length = 638

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 211 YKEALAELTFNCKPIITELTIIAGQH 288
           Y  AL +LTFN KPII  LT IA ++
Sbjct: 8   YLSALEDLTFNSKPIIHTLTYIAQEN 33

>PCF11_YEAST (P39081) Protein PCF11 (protein 1 of CF I)|
          Length = 626

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 199 VVGVYKEALAELTFNCKPIITELTIIAGQH 288
           +V  +   L ELTFN +PIIT LT +A ++
Sbjct: 8   IVKDFNSILEELTFNSRPIITTLTKLAEEN 37

>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA|
           cleavage complex II protein Pcf11) (Fragment)
          Length = 1654

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 211 YKEALAELTFNCKPIITELTIIAGQH 288
           Y+ +L +LTFN KP I  LTI+A ++
Sbjct: 121 YQSSLEDLTFNSKPHINMLTILAEEN 146

>MASY_GOSHI (P17432) Malate synthase, glyoxysomal (EC 2.3.3.9)|
          Length = 567

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 124 VVGQVVERFRARLREEAGEEPKAAAVVGVYKEALAELTFNC 246
           V G+VVE   AR+  E G+E       G+YKEA    T  C
Sbjct: 501 VFGRVVEEEMARIEREVGKEKFKK---GMYKEACKIFTRQC 538


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,925,179
Number of Sequences: 219361
Number of extensions: 285188
Number of successful extensions: 856
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)