ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl10c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predic... 274 2e-70
2dbj|AK067427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
3dbj|AK065508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
4dbj|AB037144.1| Oryza sativa (japonica cultivar-group) OsUV-DDB ... 274 2e-70
5gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 176 3e-41
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 176 3e-41
7ref|NM_116781.2| Arabidopsis thaliana DDB1A; DNA binding / nucle... 72 1e-09
8gb|AY074258.1| Arabidopsis thaliana At4g05420 mRNA sequence 72 1e-09
9gb|BT001905.1| Arabidopsis thaliana clone C104978 putative UV-da... 72 1e-09
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
11dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
12dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
13dbj|AK103584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
14emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, ... 52 0.001
15gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana... 52 0.001
16gb|AY452480.1| Lycopersicon esculentum UV damaged DNA binding pr... 44 0.31
17gb|AY531661.1| Lycopersicon cheesmanii UV-damaged DNA binding pr... 44 0.31
18gb|AY531660.1| Lycopersicon esculentum UV-damaged DNA binding pr... 44 0.31
19gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete ... 44 0.31
20gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, comple... 42 1.2
21gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, comple... 42 1.2
22gb|AC167930.2| Mycosphaerella graminicola clone JGIBBWB-9O6, com... 40 4.9
23ref|XM_756092.1| Ustilago maydis 521 hypothetical protein (UM050... 40 4.9
24emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 4.9
25gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome... 40 4.9
26gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complet... 40 4.9
27emb|CR731415.2|CNS0GRB0 Tetraodon nigroviridis full-length cDNA 40 4.9
28emb|CR711553.2|CNS0GBZH Tetraodon nigroviridis full-length cDNA 40 4.9
29emb|CR711538.2|CNS0GBZ2 Tetraodon nigroviridis full-length cDNA 40 4.9
30emb|CR725308.2|CNS0GMLE Tetraodon nigroviridis full-length cDNA 40 4.9
31emb|CR725524.2|CNS0GMRE Tetraodon nigroviridis full-length cDNA 40 4.9
32emb|CR720140.2|CNS0GILU Tetraodon nigroviridis full-length cDNA 40 4.9
33emb|CR723464.2|CNS0GL66 Tetraodon nigroviridis full-length cDNA 40 4.9
34emb|CR722209.2|CNS0GK7B Tetraodon nigroviridis full-length cDNA 40 4.9
35emb|CR722001.2|CNS0GK1J Tetraodon nigroviridis full-length cDNA 40 4.9
36emb|CR721896.2|CNS0GJYM Tetraodon nigroviridis full-length cDNA 40 4.9
37emb|CR721435.2|CNS0GJLT Tetraodon nigroviridis full-length cDNA 40 4.9
38emb|CR721410.2|CNS0GJL4 Tetraodon nigroviridis full-length cDNA 40 4.9
39emb|CR720800.2|CNS0GJ46 Tetraodon nigroviridis full-length cDNA 40 4.9
40emb|CR720362.2|CNS0GIS0 Tetraodon nigroviridis full-length cDNA 40 4.9
41emb|CR719170.2|CNS0GHUW Tetraodon nigroviridis full-length cDNA 40 4.9
42emb|CR718317.2|CNS0GH77 Tetraodon nigroviridis full-length cDNA 40 4.9
43emb|CR718205.2|CNS0GH43 Tetraodon nigroviridis full-length cDNA 40 4.9
44emb|CR718053.2|CNS0GGZV Tetraodon nigroviridis full-length cDNA 40 4.9
45emb|CR717399.2|CNS0GGHP Tetraodon nigroviridis full-length cDNA 40 4.9
46emb|CR717236.2|CNS0GGD7 Tetraodon nigroviridis full-length cDNA 40 4.9
47emb|CR716642.2|CNS0GFWR Tetraodon nigroviridis full-length cDNA 40 4.9
48emb|CR716290.2|CNS0GFMZ Tetraodon nigroviridis full-length cDNA 40 4.9
49emb|CR715062.2|CNS0GEOY Tetraodon nigroviridis full-length cDNA 40 4.9
50emb|CR711341.2|CNS0GBTL Tetraodon nigroviridis full-length cDNA 40 4.9
51emb|CR714212.2|CNS0GE1C Tetraodon nigroviridis full-length cDNA 40 4.9
52emb|CR714547.2|CNS0GEAN Tetraodon nigroviridis full-length cDNA 40 4.9
53emb|CR710701.2|CNS0GBBT Tetraodon nigroviridis full-length cDNA 40 4.9
54emb|CR709662.2|CNS0GAIY Tetraodon nigroviridis full-length cDNA 40 4.9
55emb|CR707849.2|CNS0G94L Tetraodon nigroviridis full-length cDNA 40 4.9
56emb|CR705121.2|CNS0G70T Tetraodon nigroviridis full-length cDNA 40 4.9
57emb|CR694395.2|CNS0FYQV Tetraodon nigroviridis full-length cDNA 40 4.9
58emb|CR684880.2|CNS0FREK Tetraodon nigroviridis full-length cDNA 40 4.9
59emb|CR679778.2|CNS0FNGU Tetraodon nigroviridis full-length cDNA 40 4.9
60emb|CR673578.2|CNS0FIPC Tetraodon nigroviridis full-length cDNA 40 4.9
61emb|CR666822.2|CNS0FDHO Tetraodon nigroviridis full-length cDNA 40 4.9
62emb|CR654814.2|CNS0F484 Tetraodon nigroviridis full-length cDNA 40 4.9
63emb|CR651687.2|CNS0F1T9 Tetraodon nigroviridis full-length cDNA 40 4.9
64emb|CR651566.2|CNS0F1PW Tetraodon nigroviridis full-length cDNA 40 4.9
65emb|CR649464.2|CNS0F03I Tetraodon nigroviridis full-length cDNA 40 4.9
66emb|CR646110.2|CNS0EXIC Tetraodon nigroviridis full-length cDNA 40 4.9
67emb|CR641926.2|CNS0EUA4 Tetraodon nigroviridis full-length cDNA 40 4.9
68emb|CR641209.2|CNS0ETQ7 Tetraodon nigroviridis full-length cDNA 40 4.9
69emb|CR636997.2|CNS0EQH7 Tetraodon nigroviridis full-length cDNA 40 4.9
70gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.9
71gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complet... 40 4.9
72gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complet... 40 4.9
73emb|AJ622830.1| Ustilago maydis acu2 gene for K, P-type ATPase 40 4.9
74dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.9
75gb|U17352.1|TAU17352 Thermus aquaticus L-glutamine:D-fructose-6-... 40 4.9
76emb|CT573045.6| Pig DNA sequence from clone CH242-519K3 on chrom... 40 4.9 
>ref|XM_476019.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3273

 Score =  274 bits (138), Expect = 2e-70
 Identities = 237/270 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaa 152
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9   gtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaa 68

                                                                       
Query: 153 cttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 212
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 69  cttcaccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatcca 128

                                                                       
Query: 213 cctcctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgc 272
           | | || || || || ||||||||||| ||| | || || || || ||||| || |||||
Sbjct: 129 cttgcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgc 188

                                                                       
Query: 273 gacgatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacgga 332
            ||  | ||||||||||||||||| |||||| | ||||||||||| |||||||| || ||
Sbjct: 189 cacactagagctcttccgccctcataatgagactcaggacttccttttcattgcgactga 248

                                         
Query: 333 gaggtacaagttctgcgtcctgcagtggga 362
            || ||||| ||||| || |||||||||||
Sbjct: 249 aagatacaaattctgtgttctgcagtggga 278
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>dbj|AK067427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107E16, full
           insert sequence
          Length = 4136

 Score =  274 bits (138), Expect = 2e-70
 Identities = 237/270 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaa 152
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 46  gtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaa 105

                                                                       
Query: 153 cttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 212
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 106 cttcaccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatcca 165

                                                                       
Query: 213 cctcctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgc 272
           | | || || || || ||||||||||| ||| | || || || || ||||| || |||||
Sbjct: 166 cttgcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgc 225

                                                                       
Query: 273 gacgatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacgga 332
            ||  | ||||||||||||||||| |||||| | ||||||||||| |||||||| || ||
Sbjct: 226 cacactagagctcttccgccctcataatgagactcaggacttccttttcattgcgactga 285

                                         
Query: 333 gaggtacaagttctgcgtcctgcagtggga 362
            || ||||| ||||| || |||||||||||
Sbjct: 286 aagatacaaattctgtgttctgcagtggga 315
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>dbj|AK065508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026I01, full
           insert sequence
          Length = 3792

 Score =  274 bits (138), Expect = 2e-70
 Identities = 237/270 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaa 152
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 125 gtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaa 184

                                                                       
Query: 153 cttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 212
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 185 cttcaccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatcca 244

                                                                       
Query: 213 cctcctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgc 272
           | | || || || || ||||||||||| ||| | || || || || ||||| || |||||
Sbjct: 245 cttgcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgc 304

                                                                       
Query: 273 gacgatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacgga 332
            ||  | ||||||||||||||||| |||||| | ||||||||||| |||||||| || ||
Sbjct: 305 cacactagagctcttccgccctcataatgagactcaggacttccttttcattgcgactga 364

                                         
Query: 333 gaggtacaagttctgcgtcctgcagtggga 362
            || ||||| ||||| || |||||||||||
Sbjct: 365 aagatacaaattctgtgttctgcagtggga 394
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>dbj|AB037144.1| Oryza sativa (japonica cultivar-group) OsUV-DDB mRNA for UV-damaged
           DNA binding protein, complete cds
          Length = 3658

 Score =  274 bits (138), Expect = 2e-70
 Identities = 237/270 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaa 152
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 125 gtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaa 184

                                                                       
Query: 153 cttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 212
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 185 cttcaccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatcca 244

                                                                       
Query: 213 cctcctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgc 272
           | | || || || || ||||||||||| ||| | || || || || ||||| || |||||
Sbjct: 245 cttgcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgc 304

                                                                       
Query: 273 gacgatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacgga 332
            ||  | ||||||||||||||||| |||||| | ||||||||||| |||||||| || ||
Sbjct: 305 cacactagagctcttccgccctcataatgagactcaggacttccttttcattgcgactga 364

                                         
Query: 333 gaggtacaagttctgcgtcctgcagtggga 362
            || ||||| ||||| || |||||||||||
Sbjct: 365 aagatacaaattctgtgttctgcagtggga 394
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  176 bits (89), Expect = 3e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                         
Query: 93    gtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaa 152
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 70347 gtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaa 70406

                                                  
Query: 153   cttcaccggcccccaccagctcaacctcatcgtcgcg 189
             ||||||||||||| |||||||||||||||||||||||
Sbjct: 70407 cttcaccggccccaaccagctcaacctcatcgtcgcg 70443



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 298   aatgaggcccaggacttcctcttcattgccacggagaggtacaagttctgcgtcctgcag 357
             |||||| | ||||||||||| |||||||| || || || ||||| ||||| || ||||||
Sbjct: 71070 aatgagactcaggacttccttttcattgcgactgaaagatacaaattctgtgttctgcag 71129

                  
Query: 358   tggga 362
             |||||
Sbjct: 71130 tggga 71134



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 189   gaaatgcacccgcatcgagatccac 213
             |||||||||||| ||||||||||||
Sbjct: 70773 gaaatgcacccgtatcgagatccac 70797
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  176 bits (89), Expect = 3e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                            
Query: 93       gtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaa 152
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 29291690 gtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaa 29291749

                                                     
Query: 153      cttcaccggcccccaccagctcaacctcatcgtcgcg 189
                ||||||||||||| |||||||||||||||||||||||
Sbjct: 29291750 cttcaccggccccaaccagctcaacctcatcgtcgcg 29291786



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 298      aatgaggcccaggacttcctcttcattgccacggagaggtacaagttctgcgtcctgcag 357
                |||||| | ||||||||||| |||||||| || || || ||||| ||||| || ||||||
Sbjct: 29292413 aatgagactcaggacttccttttcattgcgactgaaagatacaaattctgtgttctgcag 29292472

                     
Query: 358      tggga 362
                |||||
Sbjct: 29292473 tggga 29292477



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 189      gaaatgcacccgcatcgagatccac 213
                |||||||||||| ||||||||||||
Sbjct: 29292116 gaaatgcacccgtatcgagatccac 29292140
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>ref|NM_116781.2| Arabidopsis thaliana DDB1A; DNA binding / nucleic acid binding
           AT4G05420 (DDB1A) mRNA, complete cds
          Length = 3714

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 105/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 85  atgagcacgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgc 144
           |||||| | ||||||||||| || ||||| ||||| || ||||| ||||  ||||| |||
Sbjct: 168 atgagctcatggaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgc 227

                                                                       
Query: 145 gtcggcaacttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatc 204
           || |||||||||||  | || ||  ||||||| ||||| ||||||||||| || || |||
Sbjct: 228 gttggcaacttcacaagtcctcaagagctcaatctcattgtcgcgaaatgtactcgaatc 287

                   
Query: 205 gagatcca 212
           ||||||||
Sbjct: 288 gagatcca 295
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>gb|AY074258.1| Arabidopsis thaliana At4g05420 mRNA sequence
          Length = 1988

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 105/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 85  atgagcacgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgc 144
           |||||| | ||||||||||| || ||||| ||||| || ||||| ||||  ||||| |||
Sbjct: 123 atgagctcatggaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgc 182

                                                                       
Query: 145 gtcggcaacttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatc 204
           || |||||||||||  | || ||  ||||||| ||||| ||||||||||| || || |||
Sbjct: 183 gttggcaacttcacaagtcctcaagagctcaatctcattgtcgcgaaatgtactcgaatc 242

                   
Query: 205 gagatcca 212
           ||||||||
Sbjct: 243 gagatcca 250
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>gb|BT001905.1| Arabidopsis thaliana clone C104978 putative UV-damaged DNA binding
           factor (At4g05420) mRNA, complete cds
          Length = 3298

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 105/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 85  atgagcacgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgc 144
           |||||| | ||||||||||| || ||||| ||||| || ||||| ||||  ||||| |||
Sbjct: 1   atgagctcatggaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgc 60

                                                                       
Query: 145 gtcggcaacttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatc 204
           || |||||||||||  | || ||  ||||||| ||||| ||||||||||| || || |||
Sbjct: 61  gttggcaacttcacaagtcctcaagagctcaatctcattgtcgcgaaatgtactcgaatc 120

                   
Query: 205 gagatcca 212
           ||||||||
Sbjct: 121 gagatcca 128
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 92       cgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggca 151
                ||||||||||||| ||||||||||||||||  ||   ||||  || ||||||||||||||
Sbjct: 22752239 cgtggaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggca 22752298

                         
Query: 152      acttcaccg 160
                |||||||||
Sbjct: 22752299 acttcaccg 22752307
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>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0024F06
          Length = 129402

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                          
Query: 92     cgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggca 151
              ||||||||||||| ||||||||||||||||  ||   ||||  || ||||||||||||||
Sbjct: 128951 cgtggaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggca 129010

                       
Query: 152    acttcaccg 160
              |||||||||
Sbjct: 129011 acttcaccg 129019
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 92    cgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggca 151
             ||||||||||||| ||||||||||||||||  ||   ||||  || ||||||||||||||
Sbjct: 69628 cgtggaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggca 69687

                      
Query: 152   acttcaccg 160
             |||||||||
Sbjct: 69688 acttcaccg 69696
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>dbj|AK103584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B01, full
           insert sequence
          Length = 663

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 92  cgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggca 151
           ||||||||||||| ||||||||||||||||  ||   ||||  || ||||||||||||||
Sbjct: 146 cgtggaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggca 205

                    
Query: 152 acttcaccg 160
           |||||||||
Sbjct: 206 acttcaccg 214
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>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
          Length = 199987

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 85    atgagcacgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgc 144
             |||||| | ||||||||||| || ||||| ||||| || ||||| ||||  ||||| |||
Sbjct: 84740 atgagctcatggaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgc 84799

                           
Query: 145   gtcggcaacttcac 158
             || |||||||||||
Sbjct: 84800 gttggcaacttcac 84813
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>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV,
             complete sequence
          Length = 145453

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 85    atgagcacgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgc 144
             |||||| | ||||||||||| || ||||| ||||| || ||||| ||||  ||||| |||
Sbjct: 30554 atgagctcatggaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgc 30495

                           
Query: 145   gtcggcaacttcac 158
             || |||||||||||
Sbjct: 30494 gttggcaacttcac 30481
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>gb|AY452480.1| Lycopersicon esculentum UV damaged DNA binding protein 1 (DDB1)
           mRNA, complete cds
          Length = 3273

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 gtgcccatatatgggaggatcgcgac 275
           ||||| ||||||||||||||||||||
Sbjct: 166 gtgccaatatatgggaggatcgcgac 191
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>gb|AY531661.1| Lycopersicon cheesmanii UV-damaged DNA binding protein 1 (hp1) gene,
            promoter and complete cds
          Length = 23464

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 250  gtgcccatatatgggaggatcgcgac 275
            ||||| ||||||||||||||||||||
Sbjct: 7520 gtgccaatatatgggaggatcgcgac 7545
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>gb|AY531660.1| Lycopersicon esculentum UV-damaged DNA binding protein 1 (hp1)
           mRNA, complete cds
          Length = 3454

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 gtgcccatatatgggaggatcgcgac 275
           ||||| ||||||||||||||||||||
Sbjct: 218 gtgccaatatatgggaggatcgcgac 243
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>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence
          Length = 94766

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 94    tggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaac 153
             ||||||||||| || || || ||||| || |||| ||| |  ||||||||||||||||| 
Sbjct: 10693 tggaactacgttgttaccgctcacaaacctaccaacgttactcactcctgcgtcggcaat 10634

                   
Query: 154   ttcacc 159
             ||||||
Sbjct: 10633 ttcacc 10628
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>gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, complete sequence
          Length = 184001

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 4      gcatctctcctaccacctctccacc 28
              ||||||| |||||||||||||||||
Sbjct: 134943 gcatctcccctaccacctctccacc 134967
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>gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, complete sequence
          Length = 196550

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 4      gcatctctcctaccacctctccacc 28
              ||||||| |||||||||||||||||
Sbjct: 156328 gcatctcccctaccacctctccacc 156304
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>gb|AC167930.2| Mycosphaerella graminicola clone JGIBBWB-9O6, complete sequence
          Length = 29883

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    atctctcctaccacctctcc 25
            ||||||||||||||||||||
Sbjct: 3533 atctctcctaccacctctcc 3552
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>ref|XM_756092.1| Ustilago maydis 521 hypothetical protein (UM05038.1) partial mRNA
          Length = 3393

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  agaggtacaagttctgcgtc 351
            ||||||||||||||||||||
Sbjct: 3187 agaggtacaagttctgcgtc 3168
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 227     agggcctccagccgatgctggacg 250
               ||||| ||||||||||||||||||
Sbjct: 2141500 agggcatccagccgatgctggacg 2141477
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>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tctcctaccacctctccacc 28
             ||||||||||||||||||||
Sbjct: 56842 tctcctaccacctctccacc 56823
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>gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complete sequence
          Length = 176278

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      tctcctaccacctctccacc 28
              ||||||||||||||||||||
Sbjct: 149120 tctcctaccacctctccacc 149101
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>emb|CR731415.2|CNS0GRB0 Tetraodon nigroviridis full-length cDNA
          Length = 1171

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 479 cccaccagctcaacctcatc 498
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>emb|CR711553.2|CNS0GBZH Tetraodon nigroviridis full-length cDNA
          Length = 868

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 466 cccaccagctcaacctcatc 485
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>emb|CR711538.2|CNS0GBZ2 Tetraodon nigroviridis full-length cDNA
          Length = 828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 455 cccaccagctcaacctcatc 474
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>emb|CR725308.2|CNS0GMLE Tetraodon nigroviridis full-length cDNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 464 cccaccagctcaacctcatc 483
to top
>emb|CR725524.2|CNS0GMRE Tetraodon nigroviridis full-length cDNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 479 cccaccagctcaacctcatc 498
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>emb|CR720140.2|CNS0GILU Tetraodon nigroviridis full-length cDNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 464 cccaccagctcaacctcatc 483
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>emb|CR723464.2|CNS0GL66 Tetraodon nigroviridis full-length cDNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 450 cccaccagctcaacctcatc 469
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>emb|CR722209.2|CNS0GK7B Tetraodon nigroviridis full-length cDNA
          Length = 828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 455 cccaccagctcaacctcatc 474
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>emb|CR722001.2|CNS0GK1J Tetraodon nigroviridis full-length cDNA
          Length = 830

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 460 cccaccagctcaacctcatc 479
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>emb|CR721896.2|CNS0GJYM Tetraodon nigroviridis full-length cDNA
          Length = 852

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 480 cccaccagctcaacctcatc 499
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>emb|CR721435.2|CNS0GJLT Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 480 cccaccagctcaacctcatc 499
to top
>emb|CR721410.2|CNS0GJL4 Tetraodon nigroviridis full-length cDNA
          Length = 855

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 482 cccaccagctcaacctcatc 501
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>emb|CR720800.2|CNS0GJ46 Tetraodon nigroviridis full-length cDNA
          Length = 834

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 461 cccaccagctcaacctcatc 480
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>emb|CR720362.2|CNS0GIS0 Tetraodon nigroviridis full-length cDNA
          Length = 759

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 387 cccaccagctcaacctcatc 406
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>emb|CR719170.2|CNS0GHUW Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 480 cccaccagctcaacctcatc 499
to top
>emb|CR718317.2|CNS0GH77 Tetraodon nigroviridis full-length cDNA
          Length = 828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 455 cccaccagctcaacctcatc 474
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>emb|CR718205.2|CNS0GH43 Tetraodon nigroviridis full-length cDNA
          Length = 828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 455 cccaccagctcaacctcatc 474
to top
>emb|CR718053.2|CNS0GGZV Tetraodon nigroviridis full-length cDNA
          Length = 562

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 189 cccaccagctcaacctcatc 208
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>emb|CR717399.2|CNS0GGHP Tetraodon nigroviridis full-length cDNA
          Length = 829

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 456 cccaccagctcaacctcatc 475
to top
>emb|CR717236.2|CNS0GGD7 Tetraodon nigroviridis full-length cDNA
          Length = 829

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 456 cccaccagctcaacctcatc 475
to top
>emb|CR716642.2|CNS0GFWR Tetraodon nigroviridis full-length cDNA
          Length = 864

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 489 cccaccagctcaacctcatc 508
to top
>emb|CR716290.2|CNS0GFMZ Tetraodon nigroviridis full-length cDNA
          Length = 867

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 494 cccaccagctcaacctcatc 513
to top
>emb|CR715062.2|CNS0GEOY Tetraodon nigroviridis full-length cDNA
          Length = 867

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 494 cccaccagctcaacctcatc 513
to top
>emb|CR711341.2|CNS0GBTL Tetraodon nigroviridis full-length cDNA
          Length = 861

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 488 cccaccagctcaacctcatc 507
to top
>emb|CR714212.2|CNS0GE1C Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 480 cccaccagctcaacctcatc 499
to top
>emb|CR714547.2|CNS0GEAN Tetraodon nigroviridis full-length cDNA
          Length = 828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 455 cccaccagctcaacctcatc 474
to top
>emb|CR710701.2|CNS0GBBT Tetraodon nigroviridis full-length cDNA
          Length = 861

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 488 cccaccagctcaacctcatc 507
to top
>emb|CR709662.2|CNS0GAIY Tetraodon nigroviridis full-length cDNA
          Length = 836

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 488 cccaccagctcaacctcatc 507
to top
>emb|CR707849.2|CNS0G94L Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 480 cccaccagctcaacctcatc 499
to top
>emb|CR705121.2|CNS0G70T Tetraodon nigroviridis full-length cDNA
          Length = 829

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 456 cccaccagctcaacctcatc 475
to top
>emb|CR694395.2|CNS0FYQV Tetraodon nigroviridis full-length cDNA
          Length = 1152

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 461 cccaccagctcaacctcatc 480
to top
>emb|CR684880.2|CNS0FREK Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 456 cccaccagctcaacctcatc 475
to top
>emb|CR679778.2|CNS0FNGU Tetraodon nigroviridis full-length cDNA
          Length = 1181

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 490 cccaccagctcaacctcatc 509
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>emb|CR673578.2|CNS0FIPC Tetraodon nigroviridis full-length cDNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 491 cccaccagctcaacctcatc 510
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>emb|CR666822.2|CNS0FDHO Tetraodon nigroviridis full-length cDNA
          Length = 851

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 480 cccaccagctcaacctcatc 499
to top
>emb|CR654814.2|CNS0F484 Tetraodon nigroviridis full-length cDNA
          Length = 851

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 478 cccaccagctcaacctcatc 497
to top
>emb|CR651687.2|CNS0F1T9 Tetraodon nigroviridis full-length cDNA
          Length = 776

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 403 cccaccagctcaacctcatc 422
to top
>emb|CR651566.2|CNS0F1PW Tetraodon nigroviridis full-length cDNA
          Length = 829

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 456 cccaccagctcaacctcatc 475
to top
>emb|CR649464.2|CNS0F03I Tetraodon nigroviridis full-length cDNA
          Length = 835

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 462 cccaccagctcaacctcatc 481
to top
>emb|CR646110.2|CNS0EXIC Tetraodon nigroviridis full-length cDNA
          Length = 752

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 379 cccaccagctcaacctcatc 398
to top
>emb|CR641926.2|CNS0EUA4 Tetraodon nigroviridis full-length cDNA
          Length = 427

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 54  cccaccagctcaacctcatc 73
to top
>emb|CR641209.2|CNS0ETQ7 Tetraodon nigroviridis full-length cDNA
          Length = 861

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 488 cccaccagctcaacctcatc 507
to top
>emb|CR636997.2|CNS0EQH7 Tetraodon nigroviridis full-length cDNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 cccaccagctcaacctcatc 183
           ||||||||||||||||||||
Sbjct: 464 cccaccagctcaacctcatc 483
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 147     cggcaacttcaccggcccccacca 170
               ||||||| ||||||||||||||||
Sbjct: 2974557 cggcaacatcaccggcccccacca 2974580
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>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence
          Length = 189479

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    cagagcccagaaccctcctcctcc 58
             ||||||||||||||||||| ||||
Sbjct: 32900 cagagcccagaaccctccttctcc 32877
to top
>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence
          Length = 240957

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 35     cagagcccagaaccctcctcctcc 58
              ||||||||||||||||||| ||||
Sbjct: 232583 cagagcccagaaccctccttctcc 232560
to top
>emb|AJ622830.1| Ustilago maydis acu2 gene for K, P-type ATPase
          Length = 3393

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  agaggtacaagttctgcgtc 351
            ||||||||||||||||||||
Sbjct: 3187 agaggtacaagttctgcgtc 3168
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     cggcgcacaagcccaccagc 129
               ||||||||||||||||||||
Sbjct: 7024631 cggcgcacaagcccaccagc 7024650
to top
>gb|U17352.1|TAU17352 Thermus aquaticus L-glutamine:D-fructose-6-P amidotransferase (glmS)
            gene, complete cds and s-layer P100 (slp) gene, partial
            cds
          Length = 2560

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  aggcccaggacttcctcttc 321
            ||||||||||||||||||||
Sbjct: 1910 aggcccaggacttcctcttc 1929
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>emb|CT573045.6| Pig DNA sequence from clone CH242-519K3 on chromosome 17, complete
             sequence
          Length = 105913

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ccagaaccctcctcctcctc 60
             ||||||||||||||||||||
Sbjct: 12671 ccagaaccctcctcctcctc 12652


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,030,804
Number of Sequences: 3902068
Number of extensions: 3030804
Number of successful extensions: 62938
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62684
Number of HSP's gapped (non-prelim): 247
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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