Clone Name | bastl10b11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|CP000001.1| Bacillus cereus E33L, complete genome | 42 | 0.92 | 2 | emb|AL158147.17| Human DNA sequence from clone RP11-125K10 on ch... | 40 | 3.6 |
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>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Plus Query: 21 ccgctgccgccaccacaactaccgccata 49 |||| ||| |||||||||||||||||||| Sbjct: 972959 ccgcagcctccaccacaactaccgccata 972987
>emb|AL158147.17| Human DNA sequence from clone RP11-125K10 on chromosome 9p24.1-24.3 Contains the 3' end of the gene for RNA cyclase homolog (RNAC), a miR-101-precursor-9 micro RNA, a novel gene, a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene, the 5' UTR of the JAK2 gene for Janus kinase 2 (a protein tyrosine kinase) and a CpG island, complete sequence Length = 172186 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccacaactaccgccataagc 52 |||||||||||||||||||| Sbjct: 60477 ccacaactaccgccataagc 60496 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,191,612 Number of Sequences: 3902068 Number of extensions: 1191612 Number of successful extensions: 25667 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25663 Number of HSP's gapped (non-prelim): 4 length of query: 279 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 257 effective length of database: 17,147,199,772 effective search space: 4406830341404 effective search space used: 4406830341404 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)