>dbj|AK121431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138G19, full
           insert sequence
          Length = 3384

 Score =  101 bits (51), Expect = 1e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 194 tcgccgatctctgcaaggaactgggagtggacgaggccgtcgctagcgaggccgcggcgt 253
           |||| |||||||||||||| |||||||||||||||| ||||||  |||||||||||||| 
Sbjct: 210 tcgcggatctctgcaaggagctgggagtggacgagggcgtcgccggcgaggccgcggcgg 269

                          
Query: 254 tgctggaggagggga 268
           |||||||||||||||
Sbjct: 270 tgctggaggagggga 284

>dbj|AK064987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D03, full
           insert sequence
          Length = 3332

 Score =  101 bits (51), Expect = 1e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 194 tcgccgatctctgcaaggaactgggagtggacgaggccgtcgctagcgaggccgcggcgt 253
           |||| |||||||||||||| |||||||||||||||| ||||||  |||||||||||||| 
Sbjct: 169 tcgcggatctctgcaaggagctgggagtggacgagggcgtcgccggcgaggccgcggcgg 228

                          
Query: 254 tgctggaggagggga 268
           |||||||||||||||
Sbjct: 229 tgctggaggagggga 243

>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 209   aggaactgggagtggacgaggccgtcgctagcgaggccgcggcgttgctggaggagggga 268
             |||| |||||||||||||||| ||||||  |||||||||||||| |||||||||||||||
Sbjct: 32435 aggagctgggagtggacgagggcgtcgccggcgaggccgcggcggtgctggaggagggga 32494

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 209      aggaactgggagtggacgaggccgtcgctagcgaggccgcggcgttgctggaggagggga 268
                |||| |||||||||||||||| ||||||  |||||||||||||| |||||||||||||||
Sbjct: 18767168 aggagctgggagtggacgagggcgtcgccggcgaggccgcggcggtgctggaggagggga 18767227

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 209      aggaactgggagtggacgaggccgtcgctagcgaggccgcggcgttgctggaggagggga 268
                |||| |||||||||||||||| ||||||  |||||||||||||| |||||||||||||||
Sbjct: 18927241 aggagctgggagtggacgagggcgtcgccggcgaggccgcggcggtgctggaggagggga 18927300

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 182     tggagacgcacttcgccgatct 203
               ||||||||||||||||||||||
Sbjct: 5006164 tggagacgcacttcgccgatct 5006143

>gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188205

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 157   ccgcaacctccgccgcctcccg 178
             ||||||||||||||||||||||
Sbjct: 83713 ccgcaacctccgccgcctcccg 83734

>gb|AC005827.3|AC005827 Homo sapiens clone 14503, complete sequence
          Length = 94376

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 157   ccgcaacctccgccgcctcccg 178
             ||||||||||||||||||||||
Sbjct: 28026 ccgcaacctccgccgcctcccg 28047

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 242     aggccgcggcgttgctggaggaggg 266
               ||||||| |||||||||||||||||
Sbjct: 2166309 aggccgccgcgttgctggaggaggg 2166333

>gb|DQ443319.1| Bombyx mori heterogeneous nuclear ribonucleoprotein A1 mRNA,
           complete cds
          Length = 2037

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 160 caacctccgccgcctcccgcc 180
           |||||||||||||||||||||
Sbjct: 811 caacctccgccgcctcccgcc 791

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    aggccgcggcgttgctggagg 262
              |||||||||||||||||||||
Sbjct: 494138 aggccgcggcgttgctggagg 494118

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    aggccgcggcgttgctggagg 262
              |||||||||||||||||||||
Sbjct: 506281 aggccgcggcgttgctggagg 506261

>ref|XM_481911.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1828

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  cttcgccgatctctgcaagg 211
            ||||||||||||||||||||
Sbjct: 1339 cttcgccgatctctgcaagg 1358

>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
             complete sequence
          Length = 149870

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   cctccgccgcctcccgccgt 182
             ||||||||||||||||||||
Sbjct: 20162 cctccgccgcctcccgccgt 20181

>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
              complete sequence
          Length = 178061

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    cctccgccgcctcccgccgt 182
              ||||||||||||||||||||
Sbjct: 162999 cctccgccgcctcccgccgt 163018

>gb|AY659299.1| Synthetic construct Peudomonas aeruginosa clone FLH038400.01F
           PA3523 gene, partial cds
          Length = 1158

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 cgaggccgcggcgttgctgg 259
           ||||||||||||||||||||
Sbjct: 336 cgaggccgcggcgttgctgg 355

>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   cctccgccgcctcccgccgt 182
             ||||||||||||||||||||
Sbjct: 76656 cctccgccgcctcccgccgt 76637

>ref|XM_387674.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07498.1)
           partial mRNA
          Length = 2577

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 agccgcaacctccgccgcct 174
           ||||||||||||||||||||
Sbjct: 68  agccgcaacctccgccgcct 87

>emb|AL732579.5| Human DNA sequence from clone RP11-274K13 on chromosome X Contains the
              5'end of a novel gene (LOC93380), a novel gene, the SLC9A6
              gene for solute carrier family 9 (sodium/hydrogen
              exchanger, isoform 6), a glyceraldehyde-3-phosphate
              dehydrogenase (GAPD) pseudogene (LOC139543), an E2F
              transcription factor 6 (E2F6) pseudogene (LOC139542) and
              two CpG islands, complete sequence
          Length = 151432

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    gcaacctccgccgcctcccg 178
              ||||||||||||||||||||
Sbjct: 126955 gcaacctccgccgcctcccg 126936

>emb|AL606465.21| Human DNA sequence from clone RP11-781D11 on chromosome 1 Contains a 
            translation initiation factor SUI1 (SUI1) pseudogene, the
            gene for a novel protein (FLJ12666, FLJ44274), the NDUFS5
            gene for 15kDA NADH dehydrogenase (ubiquinone) Fe-S
            protein 5 (NADH-coenzyme Q reductase) and a CpG island,
            complete sequence
          Length = 116103

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cgatctctgcaaggaactgg 217
            ||||||||||||||||||||
Sbjct: 2804 cgatctctgcaaggaactgg 2823

>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains
             ubiquinol-cytochrome c reductase binding (UQCRB)
             pseudogene, the UAP1 gene for UDP-N-acteylglucosamine
             pyrophosphorylase 1,  the 5' end of the DDR2 gene for
             discoidin domain receptor family member 2 and a CpG
             island, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   ccgcaacctccgccgcctcc 176
             ||||||||||||||||||||
Sbjct: 13202 ccgcaacctccgccgcctcc 13221

>emb|AL451137.8| Human DNA sequence from clone RP11-18A15 on chromosome 9 Contains a CpG
              island, complete sequence
          Length = 162837

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    ccgcaacctccgccgcctcc 176
              ||||||||||||||||||||
Sbjct: 155531 ccgcaacctccgccgcctcc 155550

>emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chromosome 6q22.22-23.3
             Contains the part of the SGK gene for serum/glucocorticoid
             regulated kinase and a CpG island, complete sequence
          Length = 113673

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   gcaacctccgccgcctcccg 178
             ||||||||||||||||||||
Sbjct: 47381 gcaacctccgccgcctcccg 47400

>dbj|AB219524.1| Pseudomonas aeruginosa MexPQ-OpmE operon (mexP, mexQ, opmE),
           complete cds
          Length = 5922

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 cgaggccgcggcgttgctgg 259
           ||||||||||||||||||||
Sbjct: 358 cgaggccgcggcgttgctgg 377

>gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, complete sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    gcaacctccgccgcctcccg 178
              ||||||||||||||||||||
Sbjct: 138677 gcaacctccgccgcctcccg 138658

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 192      cttcgccgatctctgcaagg 211
                ||||||||||||||||||||
Sbjct: 16325008 cttcgccgatctctgcaagg 16324989

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      cctccgccgcctcccgccgt 182
                ||||||||||||||||||||
Sbjct: 20021837 cctccgccgcctcccgccgt 20021856



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 163      cctccgccgcctcccgccgt 182
                ||||||||||||||||||||
Sbjct: 17546851 cctccgccgcctcccgccgt 17546832

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      cctccgccgcctcccgccgt 182
                ||||||||||||||||||||
Sbjct: 34256254 cctccgccgcctcccgccgt 34256273

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      gccgcaacctccgccgcctc 175
                ||||||||||||||||||||
Sbjct: 41862337 gccgcaacctccgccgcctc 41862318

>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1147A04
          Length = 150053

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    gccgcaacctccgccgcctc 175
              ||||||||||||||||||||
Sbjct: 105713 gccgcaacctccgccgcctc 105694

>gb|AE004772.1| Pseudomonas aeruginosa PAO1, section 333 of 529 of the complete genome
          Length = 13569

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   cgaggccgcggcgttgctgg 259
             ||||||||||||||||||||
Sbjct: 13016 cgaggccgcggcgttgctgg 12997

>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689B12
          Length = 154745

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   cctccgccgcctcccgccgt 182
             ||||||||||||||||||||
Sbjct: 91527 cctccgccgcctcccgccgt 91546

>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0426E02
          Length = 166985

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   cttcgccgatctctgcaagg 211
             ||||||||||||||||||||
Sbjct: 30860 cttcgccgatctctgcaagg 30841

>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1104G07
          Length = 119643

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    cttcgccgatctctgcaagg 211
              ||||||||||||||||||||
Sbjct: 115186 cttcgccgatctctgcaagg 115167

>dbj|AK101121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025J04, full
           insert sequence
          Length = 2359

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 gccgcaacctccgccgcctc 175
           ||||||||||||||||||||
Sbjct: 30  gccgcaacctccgccgcctc 11

>dbj|AK068581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155K13, full
            insert sequence
          Length = 1827

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  cttcgccgatctctgcaagg 211
            ||||||||||||||||||||
Sbjct: 1338 cttcgccgatctctgcaagg 1357

>gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.642_C_21, complete sequence
          Length = 172084

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   gcaacctccgccgcctcccg 178
             ||||||||||||||||||||
Sbjct: 34949 gcaacctccgccgcctcccg 34968

>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete
              sequence
          Length = 190789

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    gcaaggaactgggagtggac 225
              ||||||||||||||||||||
Sbjct: 114963 gcaaggaactgggagtggac 114944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,675,212
Number of Sequences: 3902068
Number of extensions: 1675212
Number of successful extensions: 44045
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43727
Number of HSP's gapped (non-prelim): 318
length of query: 268
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 246
effective length of database: 17,147,199,772
effective search space: 4218211143912
effective search space used: 4218211143912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)