ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl09h08 |
|---|---|
| Clone Library Name | barley_pub |
>ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 2) [Contains: L-asparaginase 2 alpha subunit; L-asparaginase 2 beta subunit] Length = 325 Score = 92.8 bits (229), Expect = 2e-19 Identities = 41/62 (66%), Positives = 51/62 (82%) Frame = +2 Query: 158 MARWAIAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELET 337 M WAIA+HGGAG+DPNLP RQEEAK++L RCL +G+ LR+ +A+DVVE V+RELET Sbjct: 1 MGGWAIAVHGGAGIDPNLPAERQEEAKQLLTRCLNLGIIALRSNVSAIDVVELVIRELET 60 Query: 338 DP 343 DP Sbjct: 61 DP 62
>ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase 1) [Contains: L-asparaginase 1 alpha subunit; L-asparaginase 1 beta subunit] Length = 315 Score = 61.6 bits (148), Expect = 5e-10 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M WAIA+HGGAG P +LP+ R+ + L CL +G+ L++G LDV E VVRELE Sbjct: 1 MVGWAIALHGGAGDIPIDLPDERRIPRESALRHCLDLGISALKSGKPPLDVAELVVRELE 60 Query: 335 TDP 343 P Sbjct: 61 NHP 63
>ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 61.2 bits (147), Expect = 6e-10 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M W+IA+HGGAG P +LP R++ + L CLQ+GV+ L+A LDVVE VVRELE Sbjct: 1 MGGWSIALHGGAGDIPFSLPPERRKPREEGLRHCLQIGVEALKAQKPPLDVVELVVRELE 60
>ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 60.5 bits (145), Expect = 1e-09 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M W+IA+HGGAG P +LP R++ + L CLQ+GV+ L++ LDVVE VVRELE Sbjct: 1 MGGWSIALHGGAGDIPFSLPPERRQPREEGLRHCLQIGVEALKSQKPPLDVVELVVRELE 60
>ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 60.5 bits (145), Expect = 1e-09 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M W+IA+HGGAG P +LP R++ + L CLQ+G++ L+A LDVVE VVRELE Sbjct: 1 MGGWSIALHGGAGDIPFSLPPERRKPREEGLRHCLQIGIEALKAQNPPLDVVELVVRELE 60
>ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] (Fragment) Length = 306 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +2 Query: 212 PEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETD 340 P R++ + L CLQ+GV+ L+A + LDVVE VVRELE + Sbjct: 1 PPERRKPREEGLRHCLQIGVEALKARKSPLDVVELVVRELENN 43
>ASGX_ECOLI (P37595) Putative L-asparaginase precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase) Length = 321 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = +2 Query: 158 MARWAIAIHGGAGVDPNLPEHRQEEAKRV--LARCLQVGVDLLRAGATALDVVEAVVREL 331 M + IAIHGGAG Q+E + + L+ ++ G +L AG +ALDVV VR L Sbjct: 1 MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLL 60 Query: 332 ETDP 343 E P Sbjct: 61 EECP 64
>TASP1_MOUSE (Q8R1G1) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = +2 Query: 173 IAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDP 343 + +H GAG E + +E K V R Q ++ L+AGA A D V A + ELE P Sbjct: 44 VLVHAGAGYHS---ESKAKEYKHVCKRACQKAIEKLQAGALATDAVAAALVELEDSP 97
>TASP1_HUMAN (Q9H6P5) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = +2 Query: 173 IAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDP 343 + +H GAG E + +E K V R Q ++ L+AGA A D V A + ELE P Sbjct: 44 VLVHAGAGYHS---ESKAKEYKHVCKRACQKAIEKLQAGALATDAVTAALVELEDSP 97
>CCA_XYLFT (Q87DS9) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 416 Score = 32.3 bits (72), Expect = 0.30 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -2 Query: 337 RLQLPHHGLHHVQRGGAGAQQVDAHLQAPGQHPLGLLLAVLRQVRVHARAAVDGNGPARH 158 R PHH +H QRG A QQ+ L+ P + L+A + VH + + N Sbjct: 266 RATWPHHPMHE-QRGMAPTQQLSERLKVPRNYQQLALIACREHLNVHRLSKLHDNTVYEL 324 Query: 157 VRAC 146 ++ C Sbjct: 325 LQRC 328
>CCA_XYLFA (Q9PDL7) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 416 Score = 31.2 bits (69), Expect = 0.66 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -2 Query: 337 RLQLPHHGLHHVQRGGAGAQQVDAHLQAPGQHPLGLLLAVLRQVRVH 197 R PHH +H QRG A QQ+ L+ P + L+A + VH Sbjct: 266 RATWPHHPMHE-QRGMAPTQQLSERLKVPRDYQQLALIACREHLNVH 311
>BRN3_CHICK (Q91998) Brain-specific homeobox/POU domain protein 3 (Brn-3)| Length = 341 Score = 29.6 bits (65), Expect = 1.9 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 Query: 94 THRSAFRHLAQHTTTVTYTHAHGALGH 174 +H SA H+A H+ + +H HG H Sbjct: 149 SHMSAINHMAHHSQPMNMSHPHGLASH 175
>ASPG4_ARATH (O65268) Putative L-asparaginase 4 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 4) [Contains: L-asparaginase 4 alpha subunit; L-asparaginase 4 beta subunit] Length = 407 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/60 (30%), Positives = 25/60 (41%) Frame = +2 Query: 164 RWAIAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDP 343 R+ +A+H GAG E R CL L + +D V A ++ LE DP Sbjct: 11 RFFVAVHVGAGYHAAANEKALRSVMR--RACLAASTILRQDSGECIDAVSAAIQVLEDDP 68
>NADB1_RALSO (Q8XWM7) L-aspartate oxidase 1 (EC 1.4.3.16) (LASPO 1) (Quinolinate| synthetase B 1) Length = 533 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 212 PEHRQEEAKRVLARCLQVGVDLLR 283 P QE +LARCL++G+D+ R Sbjct: 309 PAFIQEHFPTILARCLELGIDITR 332
>SFSA_AERPE (Q9YEX9) Sugar fermentation stimulation protein homolog| Length = 240 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +2 Query: 167 WAIAIHG------GAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRA 286 WA+ + G G G+ PN P R + VLAR + GV L A Sbjct: 126 WAVEVKGVNLSLDGVGLFPNAPSARAVKHLEVLARLAREGVKPLMA 171
>AMPM_TREPA (O83814) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 255 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +2 Query: 218 HRQEEAKRVLARCLQVGVDLLRAGATALDVVEAV 319 H + E RV CL+ G+ RAGA V AV Sbjct: 116 HERLELLRVTTECLRAGIKACRAGARVRAVSRAV 149
>ENV_HV1KB (P31819) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 861 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -3 Query: 258 RHRASTRLASSWRCSGRFGSTPAPPW 181 R+ +L W CSG+F T A PW Sbjct: 591 RYLKDQQLMGIWGCSGKFICTTAVPW 616
>DCOR_ECOLI (P21169) Ornithine decarboxylase, constitutive (EC 4.1.1.17)| Length = 711 Score = 27.7 bits (60), Expect = 7.3 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = +2 Query: 191 AGVDPNLPEHRQEEAKRVLARCLQVGVDLLRA 286 A +D N H E +R+ A C+++G++ +A Sbjct: 395 AALDVNAKIHEGESGRRLWAECVEIGIEARKA 426
>MAF_AVIS4 (P23091) Transforming protein Maf| Length = 369 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/28 (42%), Positives = 12/28 (42%) Frame = -2 Query: 322 HHGLHHVQRGGAGAQQVDAHLQAPGQHP 239 HH HH GG G H APG P Sbjct: 175 HHHHHHPHHGGGGGGGGHPHGAAPGSAP 202
>PQQF_KLEPN (P27508) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 761 Score = 27.3 bits (59), Expect = 9.5 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 11/88 (12%) Frame = -2 Query: 328 LPHHGLHHVQRGGAGAQQVDAHLQAPGQHPLGLLLAVLRQVRVHARAAVDG--NGPARHV 155 L H G H G+ Q+ L PG+ P +L A+LRQ+ + + + RH+ Sbjct: 478 LRHAGGHGEWHLFDGSWQLTLQLPEPGRRPEAILQAILRQLALPVASLTPSPESIAIRHL 537 Query: 154 RACM---------*RWWCAVLGGGRRFD 98 A + + W A L GG D Sbjct: 538 MAQLPERLGTSGHQKGWLAALAGGSAED 565 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,919,092 Number of Sequences: 219361 Number of extensions: 690734 Number of successful extensions: 2570 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2497 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2564 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
