ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl09h08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 361 bits (182), Expect = 1e-96 Identities = 188/190 (98%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 60 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cacaggcaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 120 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 180 Query: 338 gacccctgct 347 |||||||||| Sbjct: 181 gacccctgct 190
>gb|AF290445.1|AF290445 Lolium perenne clone LpASN-1 unknown sequence Length = 256 Score = 244 bits (123), Expect = 2e-61 Identities = 174/191 (91%) Strand = Plus / Minus Query: 157 catggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccgga 216 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 256 catggcgcgctgggccattgcgatccacggcggcgccggcgtggacccgaacctgccgga 197 Query: 217 gcaccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacct 276 ||| || ||||||||||| ||||| || |||||||||||||||||| | ||||| ||||| Sbjct: 196 gcagcggcaggaggaggcgaagcgcgtcctggcccggtgcctgcagctcggcgtggacct 137 Query: 277 gctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagac 336 ||| |||||||||||| | || ||||||||||||||||| |||||||| ||||||||||| Sbjct: 136 gctccgcgccggcgccccggccctggacgtggtggaggcggtggtgcgcgagctggagac 77 Query: 337 ggacccctgct 347 ||| ||||||| Sbjct: 76 ggatccctgct 66
>ref|XM_474137.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 60 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 61 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 120 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 180 Query: 338 gacccct 344 ||||||| Sbjct: 181 gacccct 187
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 33195508 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 33195567 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 33195568 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 33195627 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 33195628 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 33195687 Query: 338 gacccct 344 ||||||| Sbjct: 33195688 gacccct 33195694 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 caccaagaagaagagcagagcagag 59 ||||||||| ||||||||||||||| Sbjct: 19199999 caccaagaacaagagcagagcagag 19200023
>dbj|AK121820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099C17, full insert sequence Length = 1286 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 73 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 132 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 133 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 192 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 193 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 252 Query: 338 gacccct 344 ||||||| Sbjct: 253 gacccct 259
>dbj|AK068693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163N01, full insert sequence Length = 2801 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 73 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 132 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 133 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 192 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 193 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 252 Query: 338 gacccct 344 ||||||| Sbjct: 253 gacccct 259
>dbj|AK061502.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E04, full insert sequence Length = 1438 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 62 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 121 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 122 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 181 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 182 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 241 Query: 338 gacccct 344 ||||||| Sbjct: 242 gacccct 248
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 86137 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 86196 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 86197 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 86256 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 86257 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 86316 Query: 338 gacccct 344 ||||||| Sbjct: 86317 gacccct 86323
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 212 bits (107), Expect = 6e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 158 atggcgcgctgggccattgccatccacggcggcgcgggcgtggacccgaacctgccggag 217 |||||| | ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 78157 atggcgaggtgggccattgcgatccacggcggcgccggggtggacccgaacctgccggag 78216 Query: 218 caccgccaggaggaggccaagcgggtgctggcccggtgcctgcaggtgggcgtcgacctg 277 ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| | Sbjct: 78217 cacaggcaggaggaggcgaagcgcgtgctggcgcggtgcctgcaggtgggcgtggacgcg 78276 Query: 278 ctgcgcgccggcgccaccgcgctggacgtggtggaggccgtggtgcgggagctggagacg 337 |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 78277 ctgcgctccggcgcggcggcgctggacgtcgtggaggccgtggtgcgggagctggagagc 78336 Query: 338 gacccct 344 ||||||| Sbjct: 78337 gacccct 78343
>ref|NM_188525.1| Oryza sativa (japonica cultivar-group), Ozsa8194 predicted mRNA Length = 891 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 cgccggcgccaccgcgctggacg 305 ||||||||||||||||||||||| Sbjct: 375 cgccggcgccaccgcgctggacg 397
>gb|AC121908.3| Mus musculus BAC clone RP24-176J10 from chromosome 3, complete sequence Length = 162777 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gaagaagagcagagcagagcatc 63 ||||||||||||||||||||||| Sbjct: 74974 gaagaagagcagagcagagcatc 74952
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgccggcgccaccgcgctggacg 305 ||||||||||||||||||||||| Sbjct: 6764418 cgccggcgccaccgcgctggacg 6764396
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgccggcgccaccgcgctggacg 305 ||||||||||||||||||||||| Sbjct: 116570 cgccggcgccaccgcgctggacg 116548
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgccggcgccaccgcgctggacg 305 ||||||||||||||||||||||| Sbjct: 46479 cgccggcgccaccgcgctggacg 46457
>ref|XM_524587.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ32784 (LOC469202), mRNA Length = 3030 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 aagaagaagagcagagcagagc 60 |||||||||||||||||||||| Sbjct: 703 aagaagaagagcagagcagagc 724
>emb|AL020998.1|HS745E8 Human DNA sequence from clone RP4-745E8 on chromosome 1p35.2-36.13 Contains the gene for a novel protein (FLJ43845, FLJ32784) and a novel gene, complete sequence Length = 80767 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 aagaagaagagcagagcagagc 60 |||||||||||||||||||||| Sbjct: 38512 aagaagaagagcagagcagagc 38533
>ref|NM_001039500.1| Homo sapiens hypothetical protein FLJ32784 (FLJ32784), mRNA Length = 3725 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 aagaagaagagcagagcagagc 60 |||||||||||||||||||||| Sbjct: 1284 aagaagaagagcagagcagagc 1305
>dbj|AK125833.1| Homo sapiens cDNA FLJ43845 fis, clone TESTI4006326 Length = 3725 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 aagaagaagagcagagcagagc 60 |||||||||||||||||||||| Sbjct: 1284 aagaagaagagcagagcagagc 1305
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 260 caggtgggcgtcgacctgctgcgcgccggc 289 ||||||| || ||||||||||||||||||| Sbjct: 374382 caggtggtcgacgacctgctgcgcgccggc 374353
>ref|XM_569111.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01050) partial mRNA Length = 2321 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 acgtggtggaggccgtggtgc 323 ||||||||||||||||||||| Sbjct: 1720 acgtggtggaggccgtggtgc 1740
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cattgccatccacggcggcgc 192 ||||||||||||||||||||| Sbjct: 2116247 cattgccatccacggcggcgc 2116227
>gb|AF506273.1| Thorea hispida small subunit ribosomal RNA gene, partial sequence Length = 1810 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcgcgccggcgccaccg 296 ||||||||||||||||||||| Sbjct: 688 tgctgcgcgccggcgccaccg 708
>emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon Length = 6480 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 555 ccaggaggaggccaagcgggt 575
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 acgtggtggaggccgtggtgc 323 ||||||||||||||||||||| Sbjct: 321701 acgtggtggaggccgtggtgc 321681
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 cattgccatccacggcggcgc 192 ||||||||||||||||||||| Sbjct: 3439293 cattgccatccacggcggcgc 3439313
>gb|AF420253.1| Thorea sp. GWS000425 small subunit ribosomal RNA gene, complete sequence Length = 1867 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcgcgccggcgccaccg 296 ||||||||||||||||||||| Sbjct: 711 tgctgcgcgccggcgccaccg 731
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 1418761 ccaggaggaggccaagcgggt 1418741
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggagcaccgccaggaggaggc 234 ||||||||||||||||||||| Sbjct: 195116 ggagcaccgccaggaggaggc 195096
>gb|AE005025.1| Halobacterium sp. NRC-1 section 56 of 170 of the complete genome Length = 11862 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 ggcgtcgacctgctgcgcgccggcg 290 |||||||||| |||||||||||||| Sbjct: 4746 ggcgtcgaccggctgcgcgccggcg 4722
>emb|CR753884.8| Zebrafish DNA sequence from clone CH211-276D21 in linkage group 24, complete sequence Length = 92179 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 acacacacaaccaagcaagca 22 ||||||||||||||||||||| Sbjct: 87624 acacacacaaccaagcaagca 87604
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 caccaagaagaagagcagagcagag 59 ||||||||| ||||||||||||||| Sbjct: 133521 caccaagaacaagagcagagcagag 133545
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 1095849 ccaggaggaggccaagcgggt 1095829 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccaggaggaggccaagcggg 242 |||||||||||||||||||| Sbjct: 1746496 ccaggaggaggccaagcggg 1746515
>gb|L57504.1|TTHHSP Thermus aquaticus molecular chaperone (dnak), heat shock proteins (grpE, dnaJ) genes, complete cds Length = 3650 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 357 ccaggaggaggccaagcgggt 377
>dbj|D84222.1| Thermus thermophilus DNA for DnaK homologue, GrpE homologue, DnaJ homologue and DafA, complete cds Length = 3821 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 555 ccaggaggaggccaagcgggt 575
>dbj|AB012390.1| Thermus thermophilus genes for DnaK, GrpE, DnaJ, DafA, ClpB, complete cds Length = 6480 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 555 ccaggaggaggccaagcgggt 575
>dbj|AB032368.1| Thermus thermophilus clpB, dafA, dnaJ, grpE, dnaK, ftsH genes, complete cds Length = 9000 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ccaggaggaggccaagcgggt 243 ||||||||||||||||||||| Sbjct: 5926 ccaggaggaggccaagcgggt 5906
>gb|AC111100.13| Mus musculus chromosome 3, clone RP23-179J8, complete sequence Length = 216852 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 gcagagcaacaccaacaccaagaa 43 ||||||||||||||||| |||||| Sbjct: 68828 gcagagcaacaccaacaacaagaa 68805
>gb|BT016349.1| Zea mays clone Contig182 mRNA sequence Length = 1271 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcaacaccaacaccaagaag 44 |||||||||||||||||||| Sbjct: 289 gcaacaccaacaccaagaag 270
>gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, complete sequence Length = 170041 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aagaagaagagcagagcaga 58 |||||||||||||||||||| Sbjct: 106281 aagaagaagagcagagcaga 106262
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 67403 aagaagagcagagcagagca 67422
>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence Length = 178150 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aagaagaagagcagagcaga 58 |||||||||||||||||||| Sbjct: 123612 aagaagaagagcagagcaga 123593
>ref|XM_362708.1| Magnaporthe grisea 70-15 hypothetical protein (MG08340.4) partial mRNA Length = 1251 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 aggaggaggccaagcgggtgctgg 248 |||||||||||||||||| ||||| Sbjct: 944 aggaggaggccaagcgggcgctgg 967
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgctgggccattgccatcc 182 |||||||||||||||||||| Sbjct: 570267 gcgctgggccattgccatcc 570286
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tgctgcgcgccggcgccaccgcgc 299 |||||||||||||||||| ||||| Sbjct: 467601 tgctgcgcgccggcgccaacgcgc 467624
>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete sequence Length = 86190 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 66619 aagaagagcagagcagagca 66638
>gb|AC132141.3| Mus musculus BAC clone RP23-55P19 from chromosome 15, complete sequence Length = 168586 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cacatacacgcacgcacatg 160 |||||||||||||||||||| Sbjct: 36350 cacatacacgcacgcacatg 36369
>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence Length = 244566 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 agaagaagagcagagcagag 59 |||||||||||||||||||| Sbjct: 37751 agaagaagagcagagcagag 37770
>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence Length = 213684 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 206398 aagaagagcagagcagagca 206417
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 1040409 gcgcgccggcgccaccgcgc 1040428
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggcgtcgacctgctgcgcgc 285 |||||||||||||||||||| Sbjct: 2253729 ggcgtcgacctgctgcgcgc 2253710
>gb|AC091514.2| Rattus norvegicus strain Brown Norway clone RP31-223K12, complete sequence Length = 148370 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aacaccaacaccaagaagaa 46 |||||||||||||||||||| Sbjct: 72518 aacaccaacaccaagaagaa 72537
>gb|AY971426.1| Simian immunodeficiency virus isolate P403milk clone A266Z25 envelope glycoprotein (env) gene, partial cds Length = 144 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 caacaccaacaccaagaagaagagcaga 53 ||||| ||||||||| |||||||||||| Sbjct: 53 caacaacaacaccaaaaagaagagcaga 80
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 gtggaggccgtggtgcgggagctg 331 |||||||| ||||||||||||||| Sbjct: 1173435 gtggaggcggtggtgcgggagctg 1173412
>gb|AE008859.1| Salmonella typhimurium LT2, section 163 of 220 of the complete genome Length = 23069 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgggccattgccatcc 182 |||||||||||||||||||| Sbjct: 7457 gcgctgggccattgccatcc 7438
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 gcgccggcgccaccgcgctggacg 305 |||||||||||| ||||||||||| Sbjct: 268748 gcgccggcgccatcgcgctggacg 268725
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcgcgccggcgccaccg 296 |||||||||||||||||||| Sbjct: 235676 gctgcgcgccggcgccaccg 235657
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 136394 gcgcgccggcgccaccgcgc 136375
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgccggcgccaccgcgctgg 302 |||||||||||||||||||| Sbjct: 205630 cgccggcgccaccgcgctgg 205649 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 143013 gcgcgccggcgccaccgcgc 143032
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 gcgccggcgccaccgcgctggacg 305 |||||||||||| ||||||||||| Sbjct: 187699 gcgccggcgccatcgcgctggacg 187676
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcgcgccggcgccaccg 296 |||||||||||||||||||| Sbjct: 66950 gctgcgcgccggcgccaccg 66969
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgccggcgccaccgcgctgg 302 |||||||||||||||||||| Sbjct: 119429 cgccggcgccaccgcgctgg 119448 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 55679 gcgcgccggcgccaccgcgc 55698
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 59448 gcgcgccggcgccaccgcgc 59429
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 168232 gcgcgccggcgccaccgcgc 168251
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 gcgccggcgccaccgcgctggacg 305 |||||||||||| ||||||||||| Sbjct: 272048 gcgccggcgccatcgcgctggacg 272071
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 caagcagagcaacaccaaca 36 |||||||||||||||||||| Sbjct: 289204 caagcagagcaacaccaaca 289223
>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 17/20 Length = 265050 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgctgggccattgccatcc 182 |||||||||||||||||||| Sbjct: 237091 gcgctgggccattgccatcc 237110
>emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol gene cluster Length = 51855 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 gacgtggtggaggccgtggtgcgggagctgga 333 |||||||||||||| ||||||||| |||||| Sbjct: 12786 gacgtggtggaggcgctggtgcgggtgctgga 12817
>gb|AC157019.8| Mus musculus 10 BAC RP24-377N13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 233155 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aagaagaagagcagagcaga 58 |||||||||||||||||||| Sbjct: 165179 aagaagaagagcagagcaga 165160
>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence Length = 203628 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aagaagaagagcagagcaga 58 |||||||||||||||||||| Sbjct: 60806 aagaagaagagcagagcaga 60825
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcgacctgctgcgcgccggc 289 |||||||||||||||||||| Sbjct: 638462 tcgacctgctgcgcgccggc 638481
>dbj|AK095641.1| Homo sapiens cDNA FLJ38322 fis, clone FCBBF3024364, highly similar to PROTEIN ARGININE N-METHYLTRANSFERASE 2 (EC 2.1.1.-) Length = 2443 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 1163 gcgcgccggcgccaccgcgc 1144
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cccatcgaagcgccttccgc 114 |||||||||||||||||||| Sbjct: 375598 cccatcgaagcgccttccgc 375617
>gb|AF145049.1|AF145049 Streptomyces fradiae tylosin-biosynthetic regulatory gene cluster, complete sequence Length = 10467 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcgacctgctgcgcgccggc 289 |||||||||||||||||||| Sbjct: 4180 tcgacctgctgcgcgccggc 4199
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 cgacctgctgcgcgccggcg 290 |||||||||||||||||||| Sbjct: 4057850 cgacctgctgcgcgccggcg 4057831
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cgctggacgtggtggaggcc 316 |||||||||||||||||||| Sbjct: 2812045 cgctggacgtggtggaggcc 2812064
>gb|AY082962.1| Hordeum vulgare clone HVSMEb0009D03f CONSTANS-like protein CO6 (CO6) mRNA, complete cds Length = 1324 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gccatccacggcggcgcggg 195 |||||||||||||||||||| Sbjct: 734 gccatccacggcggcgcggg 753
>gb|AY082961.1| Hordeum vulgare clone HVSMEc0008O24f CONSTANS-like protein CO6 (CO6) mRNA, complete cds Length = 1455 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gccatccacggcggcgcggg 195 |||||||||||||||||||| Sbjct: 781 gccatccacggcggcgcggg 800
>gb|AY082960.1| Hordeum vulgare CONSTANS-like protein CO6 (CO6) gene, partial cds Length = 1163 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gccatccacggcggcgcggg 195 |||||||||||||||||||| Sbjct: 740 gccatccacggcggcgcggg 759
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 5554 aagaagagcagagcagagca 5573
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgtcgacctgctgcgcgccg 287 |||||||||||||||||||| Sbjct: 5239648 cgtcgacctgctgcgcgccg 5239667
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 gggcgtcgacctgctgcgcg 284 |||||||||||||||||||| Sbjct: 960300 gggcgtcgacctgctgcgcg 960319
>gb|AC148694.1| Macaca mulatta Major Histocompatibility Complex BAC MMU242A19, complete sequence Length = 208276 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cacatacacgcacgcacatg 160 |||||||||||||||||||| Sbjct: 33899 cacatacacgcacgcacatg 33880
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 agcaccgccaggaggaggcc 235 |||||||||||||||||||| Sbjct: 21477500 agcaccgccaggaggaggcc 21477519
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 405756 aagaagagcagagcagagca 405775
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ggtggaggccgtggtgcggg 326 |||||||||||||||||||| Sbjct: 20471 ggtggaggccgtggtgcggg 20490
>gb|AC104134.4| Homo sapiens BAC clone RP11-525L16 from 2, complete sequence Length = 110127 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 agagcagagcagagcatcac 65 |||||||||||||||||||| Sbjct: 30088 agagcagagcagagcatcac 30107
>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete sequence Length = 207534 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 114609 aagaagagcagagcagagca 114628
>gb|AF110134.1|AF110134 Volvox carteri f. nagariensis GlsA (glsA) gene, complete cds Length = 8337 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aggaggaggccaagcgggtg 244 |||||||||||||||||||| Sbjct: 4811 aggaggaggccaagcgggtg 4830
>gb|AF110135.1|AF110135 Volvox carteri f. nagariensis GlsA (glsA) mRNA, complete cds Length = 2352 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aggaggaggccaagcgggtg 244 |||||||||||||||||||| Sbjct: 1135 aggaggaggccaagcgggtg 1154
>ref|XM_344409.2| PREDICTED: Rattus norvegicus ring finger protein 31 (predicted) (Rnf31_predicted), mRNA Length = 3437 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tggacgtggtggaggccgtg 319 |||||||||||||||||||| Sbjct: 2168 tggacgtggtggaggccgtg 2187
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcgccaccgcgctggacgtggtgg 311 ||||||||| |||||||||||||| Sbjct: 3363293 gcgccaccgagctggacgtggtgg 3363270 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 356858 gcgcgccggcgccaccgcgc 356839
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgggccattgccatcc 182 |||||||||||||||||||| Sbjct: 3425901 gcgctgggccattgccatcc 3425882
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 tgcgcgccggcgccaccgcgctgg 302 |||||||||||| ||||||||||| Sbjct: 4483296 tgcgcgccggcggcaccgcgctgg 4483273
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 agcaccgccaggaggaggcc 235 |||||||||||||||||||| Sbjct: 34684 agcaccgccaggaggaggcc 34703
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 agcaccgccaggaggaggcc 235 |||||||||||||||||||| Sbjct: 112000 agcaccgccaggaggaggcc 112019
>dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, map 22, complete sequences Length = 201304 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 187383 gcgcgccggcgccaccgcgc 187364
>dbj|BS000148.1| Pan troglodytes chromosome 22 clone:PTB-339M13, map 22, complete sequences Length = 51177 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 37286 gcgcgccggcgccaccgcgc 37267
>dbj|AB125380.1| Kibdelosporangium aridum chi19-2 gene for chitinase 19-2, partial cds Length = 340 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tgggcgtcgacctgctgcgc 283 |||||||||||||||||||| Sbjct: 180 tgggcgtcgacctgctgcgc 199
>emb|Z65879.1|HS64G7F H.sapiens CpG island DNA genomic Mse1 fragment, clone 64g7, forward read cpg64g7.ft1a Length = 225 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 169 gcgcgccggcgccaccgcgc 150
>dbj|AK065182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D19, full insert sequence Length = 906 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 60 aagaagagcagagcagagca 79
>gb|AY108612.1| Zea mays PCO138723 mRNA sequence Length = 1272 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcaacaccaacaccaagaag 44 |||||||||||||||||||| Sbjct: 279 gcaacaccaacaccaagaag 260
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgctgggccattgccatcc 182 |||||||||||||||||||| Sbjct: 4194738 gcgctgggccattgccatcc 4194757
>dbj|AP001761.1| Homo sapiens genomic DNA, chromosome 21q, section 105/105 Length = 39800 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 1200 gcgcgccggcgccaccgcgc 1181
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgggccattgccatcc 182 |||||||||||||||||||| Sbjct: 3573950 gcgctgggccattgccatcc 3573931
>gb|AC118731.11| Mus musculus chromosome 1, clone RP24-169M20, complete sequence Length = 160688 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gaagaagagcagagcagagcatca 64 |||| ||||||||||||||||||| Sbjct: 67400 gaagcagagcagagcagagcatca 67377
>dbj|AP000340.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-T1136, complete sequence Length = 35933 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 6755 gcgcgccggcgccaccgcgc 6736
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cgccaccgcgctggacgtgg 308 |||||||||||||||||||| Sbjct: 213155 cgccaccgcgctggacgtgg 213136
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aggtgggcgtcgacctgctgcgcg 284 |||||||| ||||||||||||||| Sbjct: 1991839 aggtgggcatcgacctgctgcgcg 1991816
>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete sequence Length = 218673 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagagcagagcagagca 61 |||||||||||||||||||| Sbjct: 145253 aagaagagcagagcagagca 145272
>emb|CR974483.16| Mouse DNA sequence from clone RP23-296D10 on chromosome 17, complete sequence Length = 125345 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cacatacacgcacgcacatg 160 |||||||||||||||||||| Sbjct: 36218 cacatacacgcacgcacatg 36237
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ggacgtggtggaggccgtgg 320 |||||||||||||||||||| Sbjct: 1969805 ggacgtggtggaggccgtgg 1969786
>emb|AL672278.12| Mouse DNA sequence from clone RP23-465H23 on chromosome 16, complete sequence Length = 187418 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgcgctgggccattgccatc 181 |||||||||||||||||||| Sbjct: 79279 cgcgctgggccattgccatc 79298
>dbj|AP000217.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone f27E1-T1136, segment 3/4, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gcgcgccggcgccaccgcgc 299 |||||||||||||||||||| Sbjct: 80741 gcgcgccggcgccaccgcgc 80722 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,113,721 Number of Sequences: 3902068 Number of extensions: 3113721 Number of successful extensions: 100853 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97085 Number of HSP's gapped (non-prelim): 3765 length of query: 347 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 325 effective length of database: 17,147,199,772 effective search space: 5572839925900 effective search space used: 5572839925900 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
