Clone Information

BLAST Search Result

Clone Name	bastl09h05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Bet...	63	2e-10
2	COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (B...	63	2e-10
3	COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (B...	63	2e-10
4	COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (B...	61	8e-10
5	COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (B...	47	9e-06
6	COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (B...	36	0.026
7	DAB1_MACFA (Q9BGX5) Disabled homolog 1	31	0.64
8	DAB1_HUMAN (O75553) Disabled homolog 1	31	0.64
9	IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)	31	0.83
10	IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)	31	0.83
11	MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Mult...	30	1.1
12	THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC	30	1.4
13	IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xI...	30	1.9
14	IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)	30	1.9
15	DNAE2_SYMTH (Q67N73) Error-prone DNA polymerase (EC 2.7.7.7)	30	1.9
16	IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xI...	30	1.9
17	IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)	30	1.9
18	ISPG_AQUAE (O67496) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	28	4.1
19	SOS2_HUMAN (Q07890) Son of sevenless homolog 2 (SOS-2)	28	5.4
20	S27A3_HUMAN (Q5K4L6) Long-chain fatty acid transport protein 3 (...	28	5.4
21	YNP2_YEAST (P53901) Hypothetical 46.2 kDa protein in YCK2-RPC8 i...	28	5.4
22	DRD2_RAT (P61169) D(2) dopamine receptor (Dopamine D2 receptor)	28	5.4
23	DRD2_MOUSE (P61168) D(2) dopamine receptor (Dopamine D2 receptor)	28	5.4
24	SOCS1_MOUSE (O35716) Suppressor of cytokine signaling 1 (SOCS-1)...	28	5.4
25	NU2C_PROMM (Q7V626) NAD(P)H-quinone oxidoreductase chain 2 (EC 1...	28	5.4
26	RIPA_COREF (Q8FQS2) HTH-type transcriptional repressor of iron p...	28	7.0
27	AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)	28	7.0
28	DAB1_MOUSE (P97318) Disabled homolog 1	28	7.0
29	NHK1_DROME (Q7KRY6) Nucleosomal histone kinase 1 (EC 2.7.11.1) (...	28	7.0
30	ROR1_HUMAN (Q01973) Tyrosine-protein kinase transmembrane recept...	28	7.0
31	PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 ...	28	7.0
32	CS016_HUMAN (Q8ND99) Protein C19orf16	28	7.0
33	IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)	28	7.0
34	TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily ...	28	7.0
35	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	28	7.0
36	MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)	27	9.2
37	SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1...	27	9.2
38	GCM2_DROME (Q9VLA2) Transcription factor glial cells missing 2 (...	27	9.2
39	DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor)	27	9.2
40	DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor)	27	9.2
41	DRD2_CERAE (P52702) D(2) dopamine receptor (Dopamine D2 receptor)	27	9.2
42	DRD2_BOVIN (P20288) D(2) dopamine receptor (Dopamine D2 receptor)	27	9.2
43	VGLC_HHV2H (Q89730) Glycoprotein C precursor	27	9.2
44	VGLC_HHV23 (P06475) Glycoprotein C precursor	27	9.2
45	ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt...	27	9.2
46	ZN576_HUMAN (Q9H609) Zinc finger protein 576	27	9.2

>COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +2

Query: 158 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 334
           A +  C  L++    S   +   +K DLE  DV +K EA+K+ ++++LNGE LP L +T+
Sbjct: 3   AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62

Query: 335 VRYVPPSEDHTIQK 376
           +R+V P +DHTI+K
Sbjct: 63  IRFVLPLQDHTIKK 76

to top

>COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +2

Query: 158 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 334
           A +  C  L++    S   +   +K DLE  DV +K EA+K+ ++++LNGE LP L +T+
Sbjct: 3   AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62

Query: 335 VRYVPPSEDHTIQK 376
           +R+V P +DHTI+K
Sbjct: 63  IRFVLPLQDHTIKK 76

to top

>COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +2

Query: 158 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 334
           A +  C  L++    S   +   +K DLE  DV +K EA+K+ ++++LNGE LP L +T+
Sbjct: 3   AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62

Query: 335 VRYVPPSEDHTIQK 376
           +R+V P +DHTI+K
Sbjct: 63  IRFVLPLQDHTIKK 76

to top

>COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 964

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = +2

Query: 170 PCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVP 349
           PC  +++          ++K DLE  D   K+E +KR + LLLNGE  P L +T++R+V 
Sbjct: 6   PCYTIINSPDLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVL 65

Query: 350 PSEDHTIQK 376
           P ++HTI+K
Sbjct: 66  PVQNHTIKK 74

to top

>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 940

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 22/68 (32%), Positives = 40/68 (58%)
 Frame = +2

Query: 173 CTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVPP 352
           C  LV  D   A   + +K  LE  +   K+ AMK  + +++NG++LP++ + V+R+V P
Sbjct: 3   CWTLVQQDFLEAPSVDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMP 62

Query: 353 SEDHTIQK 376
           S +  ++K
Sbjct: 63  SRNKELKK 70

to top

>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 973

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +2

Query: 227 KADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVPPSEDHTIQK 376
           KA  +GSD   K++ MK  ++ +L G  +P L + ++R+V PS++  ++K
Sbjct: 30  KALEKGSD-EQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKK 78

to top

>DAB1_MACFA (Q9BGX5) Disabled homolog 1|
          Length = 555

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
 Frame = +3

Query: 39  PVNHSPPLPAPRSRSTS------AADPTTD 110
           P  +SPP PAPR  S S      A+DPTTD
Sbjct: 477 PSTNSPPTPAPRQSSPSKSSASHASDPTTD 506

to top

>DAB1_HUMAN (O75553) Disabled homolog 1|
          Length = 555

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
 Frame = +3

Query: 39  PVNHSPPLPAPRSRSTS------AADPTTD 110
           P  +SPP PAPR  S S      A+DPTTD
Sbjct: 477 PSTNSPPTPAPRQSSPSKSSASHASDPTTD 506

to top

>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)|
          Length = 1235

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  ASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTAD 152
           +SRL  P+NHS  +P P SR + +A        +     G T+D
Sbjct: 357 SSRLHPPLNHSRSIPMPSSRCSPSATSPVSLSSSSTSGHGSTSD 400

to top

>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)|
          Length = 1233

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  ASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTAD 152
           +SRL  P+NHS  +P P SR + +A        +     G T+D
Sbjct: 357 SSRLHPPLNHSRSIPMPSSRCSPSATSPVSLSSSSTSGHGSTSD 400

to top

>MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Multiple drug|
            resistance protein homolog) (P-glycoprotein)
          Length = 1336

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/77 (27%), Positives = 40/77 (51%)
 Frame = +2

Query: 131  PARVHGRSGAMDKPCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGET 310
            P  +H +SG +  P    + FD  S A  +  +  L  ++V+  +EA ++  ++ ++G  
Sbjct: 1082 PGNLH-KSGYLKFPLVGKIEFDGVSFAYPDSERNHLALNNVSLSIEAREKVAIVGISGSG 1140

Query: 311  LPTLFITVVRYVPPSED 361
              TL + ++R   PSED
Sbjct: 1141 KSTL-VELLRKTYPSED 1156

to top

>THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC|
          Length = 619

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
 Frame = +2

Query: 23  ISPLRSCQPLPPS-----SG---SQISIHLRRRSNHRYPTRRRPPARVHGRSGAMDKPCT 178
           ++P  S  PLP S     SG    QI + +R  S H  PT   PP  V+  SG    P T
Sbjct: 12  LTPAVSTGPLPASRKIHKSGVLHPQIRVPMREISVH--PTAGEPPVIVYDPSGPYTDP-T 68

Query: 179 LLVHFDKGSAAMANE---IKADLEGSD 250
           +    +KG A + +E    + D+E  D
Sbjct: 69  VETSIEKGLARLRHEWITARGDVEAYD 95

to top

>IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xIRS-1-B)|
           (XIRS-L')
          Length = 1088

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  ASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTAD 152
           +SRL  P+NHS  +P P +R + +A        +     G T+D
Sbjct: 358 SSRLHPPLNHSRSIPMPATRCSPSATSPVSLSSSSTSGHGSTSD 401

to top

>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)|
          Length = 1251

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  ASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTAD 152
           ++RL  P+NHS  +P P SR + +A        +     G T+D
Sbjct: 362 SARLHPPLNHSRSIPMPASRCSPSATSPVSLSSSSTSGHGSTSD 405

to top

>DNAE2_SYMTH (Q67N73) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1085

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -2

Query: 226  DLIRHGGGALVEVD*QRARLVHGAGSAVHPRRRATACGVSVVGSAAEVDRDLGAGRGG 53
            DL+R  GGA+     + A ++ GA   +H  RRA    V+ +  A  + ++ GAG+ G
Sbjct: 868  DLVRRTGGAVPRGPLE-ALVLAGAFDRLHSNRRAALWQVAHLLEAERIRQERGAGQAG 924

to top

>IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A)|
           (XIRS-L)
          Length = 885

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  ASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTAD 152
           +SRL  P+NHS  +P P +R + +A        +     G T+D
Sbjct: 155 SSRLHPPLNHSRSIPMPATRCSPSATSPVSLSSSSTSGHGSTSD 198

to top

>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)|
          Length = 1242

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  ASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTAD 152
           ++RL  P+NHS  +P P SR + +A        +     G T+D
Sbjct: 362 SARLHPPLNHSRSIPMPASRCSPSATSPVSLSSSSTSGHGSTSD 405

to top

>ISPG_AQUAE (O67496) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 357

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 118 CGVSVVGSAAEVDRDLGAGRGGEWL 44
           C V+ +G A E D  L  GRG  WL
Sbjct: 300 CVVNAIGEAREADIGLACGRGFAWL 324

to top

>SOS2_HUMAN (Q07890) Son of sevenless homolog 2 (SOS-2)|
          Length = 1332

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = +3

Query: 48   HSPPLPAPRSRSTSAADPTTDTPHAVALR 134
            HSPP P PR       DP  DTP  V LR
Sbjct: 1201 HSPPPPPPR-------DPLPDTPPPVPLR 1222

to top

>S27A3_HUMAN (Q5K4L6) Long-chain fatty acid transport protein 3 (EC 6.2.1.-)|
           (Fatty acid transport protein 3) (FATP-3) (Very
           long-chain acyl-CoA synthetase homolog 3) (VLCS-3)
           (Solute carrier family 27 member 3)
          Length = 683

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -2

Query: 160 GAGSAVHPRRRATACGVSVVGSAAEVDRDLGAGRGG 53
           G GSA    R A   G +  GS AE     GA RGG
Sbjct: 123 GEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGG 158

to top

>YNP2_YEAST (P53901) Hypothetical 46.2 kDa protein in YCK2-RPC8 intergenic|
           region
          Length = 409

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 47  PLPPSSGSQISIHLRRRSNHRYPTRRRPPARV 142
           PLP +S S  +     R N   PTR+RPP R+
Sbjct: 381 PLPTTSNSNFN----SRKNSMSPTRKRPPPRL 408

to top

>DRD2_RAT (P61169) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 444

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 336 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 172
           T +MKS G     RR M A   A  L     ++TS P R+       +   L+    S H
Sbjct: 254 TVIMKSNGSFPVNRRRMDAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313

Query: 171 GLSMAPDLP 145
           GL   PD P
Sbjct: 314 GLHSNPDSP 322

to top

>DRD2_MOUSE (P61168) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 444

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 336 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 172
           T +MKS G     RR M A   A  L     ++TS P R+       +   L+    S H
Sbjct: 254 TVIMKSNGSFPVNRRRMDAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313

Query: 171 GLSMAPDLP 145
           GL   PD P
Sbjct: 314 GLHSNPDSP 322

to top

>SOCS1_MOUSE (O35716) Suppressor of cytokine signaling 1 (SOCS-1) (JAK-binding|
           protein) (JAB) (STAT-induced STAT inhibitor 1) (SSI-1)
          Length = 212

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 18  LASRLFAPVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 161
           +A    A  N   P   PR RS  ++  ++ +P A    R C A PAP
Sbjct: 2   VARNQVAADNAISPAAEPRRRSEPSSSSSSSSPAAPVRPRPCPAVPAP 49

to top

>NU2C_PROMM (Q7V626) NAD(P)H-quinone oxidoreductase chain 2 (EC 1.6.5.-)|
           (NAD(P)H dehydrogenase I, chain 2) (NDH-1, chain 2)
          Length = 523

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 261 LAATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDLPCTRAGGR 124
           LAA SL    A ++F +AA P  +WT  V+  S  P +     G +
Sbjct: 222 LAALSLVFVLATVAFKIAAVPFHQWTPDVYEGSPTPVVAFLSVGSK 267

to top

>RIPA_COREF (Q8FQS2) HTH-type transcriptional repressor of iron proteins A|
          Length = 332

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 24  SRLFAPVNHSPPLPAPRS----RSTSAADPTTDTP-HAVALRRGCTA 149
           ++LFA    +PPLPAPR       T AA+P   T     A +RG +A
Sbjct: 93  AKLFADRVPTPPLPAPRHARAVAQTLAANPADQTSLEEFAAQRGVSA 139

to top

>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 3   TTIFQLASRLFAPVNHSPPLPAPRSRSTSAADPT 104
           TT  Q+A    APV     +PAP +   SA  PT
Sbjct: 810 TTAIQVAPATSAPVPSPASIPAPATAQASAPTPT 843

to top

>DAB1_MOUSE (P97318) Disabled homolog 1|
          Length = 588

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +3

Query: 39  PVNHSPPLPAPRSRSTS------AADPTTD 110
           P  +SPP PAPR  S S       +DPT D
Sbjct: 510 PSTNSPPTPAPRQSSPSKSSASHVSDPTAD 539

to top

>NHK1_DROME (Q7KRY6) Nucleosomal histone kinase 1 (EC 2.7.11.1) (Protein|
           baellchen)
          Length = 599

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 39  PVNHSPPLPAPRSRSTSAADPTTDTPHAVALR 134
           P   + P  +P+ RST  A P   TP A  LR
Sbjct: 443 PRERATPKASPKPRSTPKASPKPQTPTAARLR 474

to top

>ROR1_HUMAN (Q01973) Tyrosine-protein kinase transmembrane receptor ROR1|
           precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase,
           receptor-related 1)
          Length = 937

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 42  VNHSPPLPAPRSRSTSAADPTTDTPHAVAL 131
           + H PP   P+SRS S+A  +T T H  +L
Sbjct: 845 IQHCPP---PKSRSPSSASGSTSTGHVTSL 871

to top

>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 461

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 92  RRSNHRYPTRRRPPARVHGRSGA 160
           RR ++R P RRRP  R H RS A
Sbjct: 409 RRDSYRDPYRRRPGDRSHSRSPA 431

to top

>CS016_HUMAN (Q8ND99) Protein C19orf16|
          Length = 567

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 36  APVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 161
           AP   +P +PAP  ++ +   P+     A A  R  +A PAP
Sbjct: 110 APSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAP 151

to top

>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)|
          Length = 654

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
 Frame = +2

Query: 53  PPSSGSQISIHLR-------RRSNHRYPTRRRPPARVHGRSGAMD 166
           PPS G  +SIH R       R  +HR P R     R HG +   D
Sbjct: 557 PPSPGEYVSIHFRAPPEEDLREGSHRCPKR----VRFHGGAALGD 597

to top

>TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily member 10C|
           precursor (Decoy receptor 1) (DcR1) (Decoy TRAIL
           receptor without death domain) (TNF-related
           apoptosis-inducing ligand receptor 3) (TRAIL receptor 3)
           (TRAIL-R3) (Trail receptor wi
          Length = 259

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +3

Query: 42  VNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 161
           +N SP  PAP +  T    P T  P A          PAP
Sbjct: 183 MNTSPGTPAPAAEETMTTSPGTPAPAAEETMTTSPGTPAP 222

to top

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 33  FAPVNHSPPLPAPRSRSTSAADPTTDTP 116
           +A  N +P +P PR     AA+PTT  P
Sbjct: 74  YALDNTTPTVPTPRVIQAEAANPTTSNP 101

to top

>MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)|
          Length = 344

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +2

Query: 32  LRSCQPLPP----SSGSQISIHLRRRSNHRYPTRRR 127
           L+ C P  P    +SGS  S  L +R NH Y  R+R
Sbjct: 238 LQPCSPQMPDSPLASGSSDSEDLAKRKNHNYLERKR 273

to top

>SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 613

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 36  APVNHSPPLPAPRSRSTSAADPTT-DTPHAVALRR 137
           AP    PP P P S  T+A  P     P A A++R
Sbjct: 56  APAAERPPAPGPGSGPTAALSPAAGKVPQASAMKR 90

to top

>GCM2_DROME (Q9VLA2) Transcription factor glial cells missing 2 (Protein|
           glide-2)
          Length = 613

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 276 FMASTLAATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDLP 145
           + A+  AAT+ PS+S  + +A +   L+ +  S  G S A  +P
Sbjct: 359 YHATPAAATAAPSKSPSLPYACSISELAAYQQSSSGNSFAMGVP 402

to top

>DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 443

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 336 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 172
           T +MKS G     RR + A   A  L     ++TS P R+       +   L+    S H
Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313

Query: 171 GLSMAPDLP 145
           GL   PD P
Sbjct: 314 GLHSTPDSP 322

to top

>DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 443

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 336 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 172
           T +MKS G     RR + A   A  L     ++TS P R+       +   L+    S H
Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313

Query: 171 GLSMAPDLP 145
           GL   PD P
Sbjct: 314 GLHSTPDSP 322

to top

>DRD2_CERAE (P52702) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 443

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 336 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 172
           T +MKS G     RR + A   A  L     ++TS P R+       +   L+    S H
Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313

Query: 171 GLSMAPDLP 145
           GL   PD P
Sbjct: 314 GLHSTPDSP 322

to top

>DRD2_BOVIN (P20288) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 444

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 336 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 172
           T +MKS G     RR + A   A  L     ++TS P R+       +   L+    S H
Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313

Query: 171 GLSMAPDLP 145
           GL   PD P
Sbjct: 314 GLHSTPDSP 322

to top

>VGLC_HHV2H (Q89730) Glycoprotein C precursor|
          Length = 480

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 45  NHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 161
           +++ P  +PR+ S     PT   P      +  TA PAP
Sbjct: 42  SNAAPSASPRNASAPRTTPTPPQPRKATKSKASTAKPAP 80

to top

>VGLC_HHV23 (P06475) Glycoprotein C precursor|
          Length = 480

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 45  NHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 161
           +++ P  +PR+ S     PT   P      +  TA PAP
Sbjct: 42  SNAAPSASPRNASAPRTTPTPPQPRKATKSKASTAKPAP 80

to top

>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +3

Query: 39  PVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRG-----CTADPAP 161
           P + +PP  A   +S+SA  P T  P ++A + G      T+ PAP
Sbjct: 175 PGSTTPPGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAP 220

to top

>ZN576_HUMAN (Q9H609) Zinc finger protein 576|
          Length = 170

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
 Frame = -3

Query: 300 LRRSMTARFMASTL---------AATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDL 148
           ++R   A F+A  L          A S PS  ALI+   +  P +K T  V   +  P  
Sbjct: 53  MKREHPADFVAQKLQGVLFICFTCARSFPSSKALITHQRSHGPAAKPTLPVATTTAQPTF 112

Query: 147 PCTRAG 130
           PC   G
Sbjct: 113 PCPDCG 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,478,695
Number of Sequences: 219361
Number of extensions: 678837
Number of successful extensions: 3672
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3655
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result