ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl09g09 |
|---|---|
| Clone Library Name | barley_pub |
>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4| (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 Score = 103 bits (257), Expect = 2e-22 Identities = 48/81 (59%), Positives = 61/81 (75%) Frame = +3 Query: 195 TRWLKPREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGKS 374 +RWLKP EVL ILQN E + N PQRP SGS LFN+RV +FFR DG+ W++K++G++ Sbjct: 47 SRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRRKRDGRA 106 Query: 375 GHESHEYLKVDNVKALNCYYA 437 E+HE LKV N +ALNCYYA Sbjct: 107 IAEAHERLKVGNAEALNCYYA 127
>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2| (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) Length = 1050 Score = 100 bits (250), Expect = 1e-21 Identities = 44/80 (55%), Positives = 61/80 (76%) Frame = +3 Query: 198 RWLKPREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGKSG 377 RWL+P E+ +IL+N + F I + P RPPSGS FLF+R+V R+FR DG+ W+KKK+GK+ Sbjct: 25 RWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTV 84 Query: 378 HESHEYLKVDNVKALNCYYA 437 E+HE LKV ++ L+CYYA Sbjct: 85 KEAHEKLKVGSIDVLHCYYA 104
>CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator 1| (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) Length = 1007 Score = 98.6 bits (244), Expect = 6e-21 Identities = 44/80 (55%), Positives = 60/80 (75%) Frame = +3 Query: 198 RWLKPREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGKSG 377 RWL+P E+ +ILQN F I + +P RP SGS FLF+R+V R+FR DG+ W+KKK+GK+ Sbjct: 28 RWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGHNWRKKKDGKTI 87 Query: 378 HESHEYLKVDNVKALNCYYA 437 E+HE LKV ++ L+CYYA Sbjct: 88 REAHEKLKVGSIDVLHCYYA 107
>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3| (Signal-responsive protein 1) (Ethylene-induced calmodulin-binding protein a) (EICBP.a) (Ethylene-induced calmodulin-binding protein 1) (EICBP1) Length = 1032 Score = 94.7 bits (234), Expect = 9e-20 Identities = 43/82 (52%), Positives = 58/82 (70%) Frame = +3 Query: 192 RTRWLKPREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGK 371 R RWL+P E+ +ILQN + F I P P SGS F+F+R+V R+FR DG+ W+KKK+GK Sbjct: 23 RHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGHNWRKKKDGK 82 Query: 372 SGHESHEYLKVDNVKALNCYYA 437 + E+HE LK +V L+CYYA Sbjct: 83 TVKEAHERLKAGSVDVLHCYYA 104
>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5| (Signal-responsive protein 6) (Ethylene-induced calmodulin-binding protein f) (EICBP.f) Length = 923 Score = 77.8 bits (190), Expect = 1e-14 Identities = 36/81 (44%), Positives = 56/81 (69%) Frame = +3 Query: 195 TRWLKPREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGKS 374 +RWL+P E+ +L N + F I+ + P SG+ LF+R++ R FR DG+ W+KKK+GK+ Sbjct: 34 SRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKT 93 Query: 375 GHESHEYLKVDNVKALNCYYA 437 E+HE+LKV N + ++ YYA Sbjct: 94 IKEAHEHLKVGNEERIHVYYA 114
>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6| (Signal-responsive protein 3) (Ethylene-induced calmodulin-binding protein e) (EICBP.e) (Ethylene-induced calmodulin-binding protein 5) (EICBP5) Length = 838 Score = 60.8 bits (146), Expect = 1e-09 Identities = 31/82 (37%), Positives = 48/82 (58%) Frame = +3 Query: 192 RTRWLKPREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGK 371 ++RWL+P E+ IL G LF+R++ R FR DG+ W+KKK+G+ Sbjct: 33 KSRWLRPNEIHAIL-----------------CGRIILFDRKMLRNFRKDGHNWKKKKDGR 75 Query: 372 SGHESHEYLKVDNVKALNCYYA 437 + E+HE+LKV N + ++ YYA Sbjct: 76 TVKEAHEHLKVGNEERIHVYYA 97
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 51.6 bits (122), Expect = 8e-07 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Frame = +3 Query: 192 RTRWLKPREVLDIL----QNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKK 359 R RW E+ L ++ E +T RP +GS L+NR+ ++ R DGY+W+K+ Sbjct: 38 RLRWNTNEEIASYLITFEKHDEWLSCAPKT--RPQNGSIILYNRKKVKY-RKDGYLWKKR 94 Query: 360 KNGKSGHESHEYLKVDNVKAL-NCY 431 K+GK+ E H LKV ++ L CY Sbjct: 95 KDGKTTREDHMKLKVQGMECLYGCY 119
>CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1| Length = 1673 Score = 51.6 bits (122), Expect = 8e-07 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +3 Query: 276 RPPSGSWFLFNRRVHRFFRNDGYVWQKKKNGKSGHESHEYLKVDNVKAL-NCY 431 RP +GS L+NR+ ++ R DGY W+K+K+GK+ E H LKV V+ L CY Sbjct: 101 RPQNGSMILYNRKKVKY-RKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCY 152
>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2| Length = 1208 Score = 49.7 bits (117), Expect = 3e-06 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%) Frame = +3 Query: 192 RTRWLKPREVLDIL----QNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKK 359 R RW E+ L ++ E +T RP +GS L+NR+ ++ R DGY+W+K+ Sbjct: 38 RLRWNTNEEIASYLITFEKHDEWLSCAPKT--RPQNGSIILYNRKKVKY-RKDGYLWKKR 94 Query: 360 KNGKSGHESHEYLKVDNVKALN--CYY 434 K+GK+ E H LKV ++ ++ C Y Sbjct: 95 KDGKTTREDHMKLKVQGMEPVSWQCLY 121
>V06_BPT7 (P03778) Protein 0.6B [Contains: Protein 0.6A]| Length = 111 Score = 31.6 bits (70), Expect = 0.89 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +3 Query: 282 PSGSWFLFNRRVHRFFRNDGYVWQKKKNGKSGHESHEYLKVDNVKALN 425 P+G+ + NRR+ R +R + +K K G+ G + + LK N LN Sbjct: 62 PNGTLYAANRRIVRTWRENNLERRKDKRGRRGIDERKRLKPRNSPHLN 109
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 31.6 bits (70), Expect = 0.89 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAG 8 P N +G P+G +GG+G + P PP + G S AG Sbjct: 530 PDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAG 571
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAG 8 P N +G P+G +GG+G + P PP + G S AG Sbjct: 524 PDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGPAG 565
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 2.0 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPP 47 P N +G P+G +GG+G + P PP Sbjct: 524 PDGNNGAQGPPGPQGVQGGKGEQGPAGPP 552
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 P+ G P G +G G P PP R R GE+ AG P Sbjct: 1090 PSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPP 1133
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 P+ G P G +G G P PP R R GE+ AG P Sbjct: 1091 PSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAGPP 1134
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 2.0 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPP 47 P N +G P+G +GG+G + P PP Sbjct: 530 PDGNNGAQGPPGPQGVQGGKGEQGPAGPP 558
>CO2A1_CHICK (P02460) Collagen alpha-1(II) chain precursor (Fragment)| Length = 369 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 P+ G P G +G G P PP R R GE AG P Sbjct: 41 PSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPP 84
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -1 Query: 121 NSGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 N GE G + P G G G E P+ PP R GE G P Sbjct: 707 NPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLP 747
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -1 Query: 115 GEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 G G P+G G GT PP + GE +AG+P Sbjct: 733 GHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTP 770
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -1 Query: 130 ASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 AS SG G K PRG +G G PQ P + G +AG P Sbjct: 20 ASCQSG-GLKGPRGAKGPRGDRGPQGPNGRDGKAGLPGIAGPP 61
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 P+ G P G +G G P PP R R GE+ G P Sbjct: 1131 PSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPVGPP 1174
>SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)| Length = 1287 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 136 APASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*G 26 AP+ T++G G RGG GG T + TR G Sbjct: 548 APSKTDNGRGGSTARGGRGGSNTRDGRGGRGNSTRGG 584
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -1 Query: 121 NSGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 N GE G + P G G G E P+ PP R GE G P Sbjct: 707 NPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGEQGATGLP 747
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/44 (36%), Positives = 17/44 (38%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 PA G P G +G G P PP R GE GSP Sbjct: 979 PAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGNRGERGSEGSP 1022
>DMI1_ORYSA (Q5N941) Putative ion channel DMI1, chloroplast precursor| Length = 965 Score = 28.9 bits (63), Expect = 5.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 118 SGEGTKNPRGGEGGEGTEYPQAPP 47 S G +P GG GGEG+ P+ PP Sbjct: 4 SDGGEASPSGGGGGEGSPDPRRPP 27
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/44 (36%), Positives = 17/44 (38%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 PA G P G +G G P PP R GE GSP Sbjct: 1134 PAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGERGSEGSP 1177
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +3 Query: 18 QDSPHLVLVLGGACGYSVPSPPSPPRGFLVPSPE 119 Q SP L G GYS P PPR ++ +P+ Sbjct: 1176 QPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQ 1209
>ROS_HUMAN (P08922) Proto-oncogene tyrosine-protein kinase ROS precursor (EC| 2.7.10.1) (c-ros-1) Length = 2347 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 1/82 (1%) Frame = +3 Query: 66 SVPSPPSPPRGFLVPSPEFVEAGAMXXXXXXXXXXXXXXXAVRTRWLKPREVLDILQNSE 245 +VPS P PR F++PS + + V RW KP+ +L E Sbjct: 1039 TVPSAPENPRIFILPSGKCCNKNEV---------------VVEFRWNKPKHENGVLTKFE 1083 Query: 246 LF-GIHNRTPQRPPSGSWFLFN 308 +F I N++ W N Sbjct: 1084 IFYNISNQSITNKTCEDWIAVN 1105
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -1 Query: 121 NSGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 N GE G + P G G G E P+ PP R GE G P Sbjct: 111 NPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQGATGLP 151
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = -1 Query: 118 SGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 SGE G + P G G G P PP GES GSP Sbjct: 968 SGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSP 1007
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = -1 Query: 118 SGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 SGE G + P G G G P PP GES GSP Sbjct: 968 SGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSP 1007
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/44 (36%), Positives = 17/44 (38%) Frame = -1 Query: 133 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 2 PA G P G +G G P PP R GE GSP Sbjct: 1135 PAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSP 1178 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,088,663 Number of Sequences: 219361 Number of extensions: 994511 Number of successful extensions: 4830 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3956 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4805 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
