ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl09g06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner envelope protein (OSJNBa0051D19.7), mRNA Length = 2967 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 150 ctcctcttcgccccgctcaagccgttgcccctcctccgcttccc 193 ||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 55 ctcctcttcgcgccgctcaagcccctccccctcctccgcttccc 98
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 150 ctcctcttcgccccgctcaagccgttgcccctcctccgcttccc 193 ||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 49548 ctcctcttcgcgccgctcaagcccctccccctcctccgcttccc 49591 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 94 caatggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 34974 caatggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 35023
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 150 ctcctcttcgccccgctcaagccgttgcccctcctccgcttccc 193 ||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 18163580 ctcctcttcgcgccgctcaagcccctccccctcctccgcttccc 18163537 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 94 caatggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 18178154 caatggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 18178105
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 150 ctcctcttcgccccgctcaagccgttgcccctcctccgcttccc 193 ||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 18172833 ctcctcttcgcgccgctcaagcccctccccctcctccgcttccc 18172790 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 94 caatggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 18187407 caatggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 18187358
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 125 ctcgccgcgcgccgccgcctccccgc 150 |||||||||||||||||||||||||| Sbjct: 27483318 ctcgccgcgcgccgccgcctccccgc 27483343
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 125 ctcgccgcgcgccgccgcctccccgc 150 |||||||||||||||||||||||||| Sbjct: 52876 ctcgccgcgcgccgccgcctccccgc 52901
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 125 ctcgccgcgcgccgccgcctccccgc 150 |||||||||||||||||||||||||| Sbjct: 102387 ctcgccgcgcgccgccgcctccccgc 102412
>dbj|AK120578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E03, full insert sequence Length = 1669 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 94 caatggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 43 caatggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 92
>ref|NM_197135.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner envelope protein (OSJNBa0051D19.5), mRNA Length = 1692 Score = 48.1 bits (24), Expect = 0.015 Identities = 42/48 (87%) Strand = Plus / Plus Query: 96 atggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 1 atggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 48
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 127 cgccgcgcgccgccgcctccccgc 150 |||||||||||||||||||||||| Sbjct: 28535879 cgccgcgcgccgccgcctccccgc 28535856 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||| ||| ||||||||||||| Sbjct: 28253855 cgccgccgccgccctgctcctcttcgcc 28253882 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 24978037 gggggatggggagggggagg 24978056 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 10344934 ccgccgcctccccgctcctc 10344953
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 127 cgccgcgcgccgccgcctccccgc 150 |||||||||||||||||||||||| Sbjct: 28627203 cgccgcgcgccgccgcctccccgc 28627180 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||| ||| ||||||||||||| Sbjct: 28345179 cgccgccgccgccctgctcctcttcgcc 28345206 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 25069312 gggggatggggagggggagg 25069331 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 10343035 ccgccgcctccccgctcctc 10343054
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 127 cgccgcgcgccgccgcctccccgc 150 |||||||||||||||||||||||| Sbjct: 130009 cgccgcgcgccgccgcctccccgc 129986
>gb|AC125129.5| Mus musculus BAC clone RP24-308H8 from chromosome 9, complete sequence Length = 142233 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccccg 149 ||||||||||||||||||||||| Sbjct: 94173 cgccgcgcgccgccgcctccccg 94195
>gb|AC122428.4| Mus musculus BAC clone RP24-175C20 from chromosome 9, complete sequence Length = 185902 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccccg 149 ||||||||||||||||||||||| Sbjct: 1884 cgccgcgcgccgccgcctccccg 1906
>dbj|AK142168.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330004E16 product:unclassifiable, full insert sequence Length = 2293 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccccg 149 ||||||||||||||||||||||| Sbjct: 914 cgccgcgcgccgccgcctccccg 936
>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete sequence Length = 195409 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccccg 149 ||||||||||||||||||||||| Sbjct: 142849 cgccgcgcgccgccgcctccccg 142871
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccccg 149 ||||||||||||||||||||||| Sbjct: 16908 cgccgcgcgccgccgcctccccg 16930
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 cgaggctctcgccgcgcgccgccgcc 143 ||||||| |||||||||||||||||| Sbjct: 399354 cgaggctatcgccgcgcgccgccgcc 399379
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.23 Identities = 40/46 (86%) Strand = Plus / Plus Query: 98 ggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 10763436 ggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 10763481 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 35856143 gggggatggggagggggagg 35856162
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 44.1 bits (22), Expect = 0.23 Identities = 40/46 (86%) Strand = Plus / Plus Query: 98 ggagctctccctcgtctccgcgaggctctcgccgcgcgccgccgcc 143 ||||||||| || | |||||||| || |||||| |||||||||||| Sbjct: 102917 ggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgcc 102962
>ref|XM_480961.1| Oryza sativa (japonica cultivar-group), mRNA Length = 225 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ctcgccgcgcgccgccgcctc 145 ||||||||||||||||||||| Sbjct: 204 ctcgccgcgcgccgccgcctc 184
>ref|NM_186040.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1679 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccc 147 ||||||||||||||||||||| Sbjct: 68 cgccgcgcgccgccgcctccc 88
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ccgcgcgccgccgcctccccg 149 ||||||||||||||||||||| Sbjct: 145108 ccgcgcgccgccgcctccccg 145088
>ref|XM_611867.2| PREDICTED: Bos taurus similar to CG5913-PA (LOC532711), mRNA Length = 1297 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 cgggggatggggagggggagg 276 ||||||||||||||||||||| Sbjct: 1096 cgggggatggggagggggagg 1116
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ccgcgcgccgccgcctccccg 149 ||||||||||||||||||||| Sbjct: 30050 ccgcgcgccgccgcctccccg 30030
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 131 gcgcgccgccgcctccccgctcctc 155 ||||||||||||| ||||||||||| Sbjct: 87144 gcgcgccgccgccgccccgctcctc 87120
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ccgcgcgccgccgcctccccg 149 ||||||||||||||||||||| Sbjct: 14920012 ccgcgcgccgccgcctccccg 14919992
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ctcgccgcgcgccgccgcctc 145 ||||||||||||||||||||| Sbjct: 8914714 ctcgccgcgcgccgccgcctc 8914694
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccc 147 ||||||||||||||||||||| Sbjct: 27895416 cgccgcgcgccgccgcctccc 27895436 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||||| ||||||| ||||||| Sbjct: 25861123 cgccgccgcctctccgctccccttcgcc 25861096
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ctcgccgcgcgccgccgcctc 145 ||||||||||||||||||||| Sbjct: 26636279 ctcgccgcgcgccgccgcctc 26636259 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cgcgcgccgccgcctccccg 149 |||||||||||||||||||| Sbjct: 27961359 cgcgcgccgccgcctccccg 27961340
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 ctctcgccgcgcgccgccgcc 143 ||||||||||||||||||||| Sbjct: 3725567 ctctcgccgcgcgccgccgcc 3725547
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccc 147 ||||||||||||||||||||| Sbjct: 58774 cgccgcgcgccgccgcctccc 58794
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ctcgccgcgcgccgccgcctc 145 ||||||||||||||||||||| Sbjct: 16376 ctcgccgcgcgccgccgcctc 16356
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ctcgccgcgcgccgccgcctc 145 ||||||||||||||||||||| Sbjct: 98357 ctcgccgcgcgccgccgcctc 98337
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ctcgccgcgcgccgccgcctc 145 ||||||||||||||||||||| Sbjct: 109993 ctcgccgcgcgccgccgcctc 109973
>dbj|AK121144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078A01, full insert sequence Length = 1740 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 ccgcgcgccgccgcctccccg 149 ||||||||||||||||||||| Sbjct: 563 ccgcgcgccgccgcctccccg 583
>dbj|AK106855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B07, full insert sequence Length = 1679 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccc 147 ||||||||||||||||||||| Sbjct: 68 cgccgcgcgccgccgcctccc 88
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ccgcgcgccgccgcctccccg 149 ||||||||||||||||||||| Sbjct: 15001958 ccgcgcgccgccgcctccccg 15001938
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctccccgc 150 ||||||||||||||| |||||||| Sbjct: 17018 cgccgcgcgccgccggctccccgc 17041
>gb|AY258286.1| Homo sapiens proliferation-inducing protein 13 mRNA, complete cds Length = 1564 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgcgcgccgccgcctccc 147 |||||||||||||||||||| Sbjct: 57 gccgcgcgccgccgcctccc 76
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ccccgctcctcttcgccccg 164 |||||||||||||||||||| Sbjct: 2087837 ccccgctcctcttcgccccg 2087856
>ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1 (LOC468024), mRNA Length = 13500 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cccctcctccgcttcccgccacgc 200 ||||||||||||||||| |||||| Sbjct: 13200 cccctcctccgcttccccccacgc 13223
>gb|AC154039.17| Mus musculus 10 BAC RP23-282M20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210923 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 155906 gggggatggggagggggagg 155925
>ref|XM_469022.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1766 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 138 gggggatggggagggggagg 157
>ref|XM_469482.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||| ||| ||||||||||||| Sbjct: 397 cgccgccgccgccctgctcctcttcgcc 424
>ref|NM_006885.2| Homo sapiens AT-binding transcription factor 1 (ATBF1), mRNA Length = 11893 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cccctcctccgcttcccgccacgc 200 ||||||||||||||||| |||||| Sbjct: 11485 cccctcctccgcttccccccacgc 11508
>ref|XM_514053.1| PREDICTED: Pan troglodytes LOC457577 (LOC457577), mRNA Length = 781 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgcgcgccgccgcctccc 147 |||||||||||||||||||| Sbjct: 48 gccgcgcgccgccgcctccc 67
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 94440 gggggatggggagggggagg 94459
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ccccgctcctcttcgccccg 164 |||||||||||||||||||| Sbjct: 2088681 ccccgctcctcttcgccccg 2088700
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cgcgcgccgccgcctccccgctcc 153 ||||||||||||||||| |||||| Sbjct: 1841271 cgcgcgccgccgcctccgcgctcc 1841294
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cccgcctccgcagccggcgg 236 |||||||||||||||||||| Sbjct: 3010319 cccgcctccgcagccggcgg 3010338
>ref|NM_030806.3| Homo sapiens chromosome 1 open reading frame 21 (C1orf21), mRNA Length = 10308 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgcgcgccgccgcctccc 147 |||||||||||||||||||| Sbjct: 144 gccgcgcgccgccgcctccc 163
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cggcggccccgccgcgtggc 250 |||||||||||||||||||| Sbjct: 2489419 cggcggccccgccgcgtggc 2489438 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgccgcgcgccgccgcctcc 146 |||||||||||||||||||| Sbjct: 2177491 cgccgcgcgccgccgcctcc 2177472
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cgcgcgccgccgcctccccgctcc 153 ||||||||||||||||| |||||| Sbjct: 3082154 cgcgcgccgccgcctccgcgctcc 3082177
>gb|AC124978.19| Mus musculus chromosome 5, clone RP24-107D19, complete sequence Length = 182405 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 19637 gggggatggggagggggagg 19656
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccgcctccgcagccggcggc 237 |||||||||||||||||||| Sbjct: 261902 ccgcctccgcagccggcggc 261921
>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 246705 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 242786 gggggatggggagggggagg 242767
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cccgcctccgcagccggcgg 236 |||||||||||||||||||| Sbjct: 154512 cccgcctccgcagccggcgg 154531
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 192931 gggggatggggagggggagg 192950
>gb|AC132329.4| Mus musculus BAC clone RP24-206F15 from chromosome 18, complete sequence Length = 142250 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 131594 gggggatggggagggggagg 131613 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 131575 gggggatggggagggggagg 131594
>gb|AC122826.4| Mus musculus BAC clone RP23-209L3 from chromosome 18, complete sequence Length = 197208 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 146663 gggggatggggagggggagg 146644 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 146644 gggggatggggagggggagg 146625
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 118615 gggggatggggagggggagg 118634
>gb|AC122291.4| Mus musculus BAC clone RP23-255N20 from 15, complete sequence Length = 184378 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 146692 gggggatggggagggggagg 146711
>gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, complete sequence Length = 143388 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 70222 gggggatggggagggggagg 70203
>gb|AC163109.5| Mus musculus 6 BAC RP23-172E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199216 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 196400 gggggatggggagggggagg 196381
>emb|AL445228.13| Human DNA sequence from clone RP11-382D12 on chromosome 1 Contains a novel gene, the 5' end of the C1orf21 gene for chromosome 1 open reading frame 21 and a CpG island, complete sequence Length = 116252 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgcgcgccgccgcctccc 147 |||||||||||||||||||| Sbjct: 106888 gccgcgcgccgccgcctccc 106907
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 cctcgggggatggggagggggagg 276 |||||||||| ||||||||||||| Sbjct: 136627 cctcgggggagggggagggggagg 136604
>emb|AL353805.20| Human DNA sequence from clone RP11-190I13 on chromosome 9 Contains the 5' end of a novel gene (FLJ20287), a novel gene similar to RIKEN cDNA 5730528L13 gene (MGC17337), the 5' end of the TMEFF1 gene for transmembrane protein with EGF-like and two follistatin-like domains 1 (H7365, C9ORF2) and four CpG islands, complete sequence Length = 158606 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 58302 gggggatggggagggggagg 58283
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 1487 ccgccgcctccccgctcctc 1506
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 9844 gggggatggggagggggagg 9863
>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the Vamp2 gene for vesicle-associated membrane 2, the Per1 gene for period homolog 1 (Drosophila), the Hes7 gene for hairy and enhancer of split 7 (Drosophila), the Aloxe3 gene for arachidonate lipoxygenase 3, the Alox12b gene for arachidonate 12-lipoxygenase 12R type, the Alox15b gene for arachidonate 15-lipoxygenase second type, the Gucy2e gene for guanylate cyclase 2e, a novel gene, the gene for LYST-interacting protein LIP8 (Lip8-pending), the gene for the likely ortholog of H. sapiens trafficking protein particle complex 1 (TRAPPC1)), the Kcnab3 gene for potassium voltage-gated channel shaker-related subfamily beta member 3, a novel gene, the 3' end of the Chd3 gene for chromodomain helicase DNA binding protein 3 and six CpG islands, complete sequence Length = 261224 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 116521 gggggatggggagggggagg 116540
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cccgcctccgcagccggcgg 236 |||||||||||||||||||| Sbjct: 242340 cccgcctccgcagccggcgg 242359
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ccgcttcccgccacgcaagc 204 |||||||||||||||||||| Sbjct: 22212 ccgcttcccgccacgcaagc 22231
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cggcggccccgccgcgtggc 250 |||||||||||||||||||| Sbjct: 669428 cggcggccccgccgcgtggc 669447 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgccgcgcgccgccgcctcc 146 |||||||||||||||||||| Sbjct: 339175 cgccgcgcgccgccgcctcc 339156
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cgcgcgccgccgcctccccgctcc 153 ||||||||||||||||| |||||| Sbjct: 2812205 cgcgcgccgccgcctccgcgctcc 2812228
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 58400 ccgccgcctccccgctcctc 58419
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tctcgccgcgcgccgccgcc 143 |||||||||||||||||||| Sbjct: 893078 tctcgccgcgcgccgccgcc 893097
>gb|AE005912.1| Caulobacter crescentus CB15 section 238 of 359 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ccgcgcgccgccgcctcccc 148 |||||||||||||||||||| Sbjct: 8241 ccgcgcgccgccgcctcccc 8260
>gb|AE012174.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 82 of 460 of the complete genome Length = 9054 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cgcagccggcggccccgccg 244 |||||||||||||||||||| Sbjct: 6475 cgcagccggcggccccgccg 6494
>gb|AC004943.2| Homo sapiens PAC clone RP5-991G20 from 16, complete sequence Length = 141313 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cccctcctccgcttcccgccacgc 200 ||||||||||||||||| |||||| Sbjct: 79017 cccctcctccgcttccccccacgc 79040
>ref|XM_498167.2| PREDICTED: Homo sapiens hypothetical protein DKFZp434J1015 (DKFZp434J1015), mRNA Length = 4839 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 218 ccgcctccgcagccggcggccccgccgc 245 |||||||||| ||| ||||||||||||| Sbjct: 3815 ccgcctccgccgcccgcggccccgccgc 3788
>gb|AC083795.5| Homo sapiens BAC clone RP11-255I10 from 4, complete sequence Length = 185371 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 133458 gggggatggggagggggagg 133477
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence Length = 173967 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 218 ccgcctccgcagccggcggccccgccgc 245 |||||||||| ||| ||||||||||||| Sbjct: 38827 ccgcctccgccgcccgcggccccgccgc 38800
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||| ||| ||||||||||||| Sbjct: 104996 cgccgccgccgccctgctcctcttcgcc 105023
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgcagccggcggccccgccg 244 |||||||||||||||||||| Sbjct: 4140050 cgcagccggcggccccgccg 4140031
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgccgcgcgccgccgcctcc 146 |||||||||||||||||||| Sbjct: 1985594 cgccgcgcgccgccgcctcc 1985613 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggcggccccgccgcgtggc 250 |||||||||||||||||||| Sbjct: 1956464 cggcggccccgccgcgtggc 1956445
>gb|AF312864.1|AF312864 Homo sapiens C1orf21 mRNA, complete cds Length = 10215 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgcgcgccgccgcctccc 147 |||||||||||||||||||| Sbjct: 66 gccgcgcgccgccgcctccc 85
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 39843 gggggatggggagggggagg 39824
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cgcgcgccgccgcctccccg 149 |||||||||||||||||||| Sbjct: 148040 cgcgcgccgccgcctccccg 148021
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tctcgccgcgcgccgccgcc 143 |||||||||||||||||||| Sbjct: 1598473 tctcgccgcgcgccgccgcc 1598492
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 46689 gggggatggggagggggagg 46708
>dbj|AK119801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A08, full insert sequence Length = 537 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgcgcgccgccgcctccccg 149 |||||||||||||||||||| Sbjct: 7 cgcgcgccgccgcctccccg 26
>dbj|AK119702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D09, full insert sequence Length = 564 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgcgcgccgccgcctccccg 149 |||||||||||||||||||| Sbjct: 7 cgcgcgccgccgcctccccg 26
>dbj|AK105828.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E04, full insert sequence Length = 1253 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||| ||| ||||||||||||| Sbjct: 434 cgccgccgccgccctgctcctcttcgcc 461
>dbj|AK105818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D03, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 12 ccgccgcctccccgctcctc 31
>dbj|AK104149.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D01, full insert sequence Length = 1348 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 55 ccgccgcctccccgctcctc 74
>dbj|AK102994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116E04, full insert sequence Length = 1547 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 702 gggggatggggagggggagg 683
>dbj|AK073460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F15, full insert sequence Length = 1454 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgcctccccgctcctc 155 |||||||||||||||||||| Sbjct: 139 ccgccgcctccccgctcctc 158
>dbj|AK069209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009E01, full insert sequence Length = 1562 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 717 gggggatggggagggggagg 698
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 134 cgccgccgcctccccgctcctcttcgcc 161 |||||||||||| ||||||| ||||||| Sbjct: 31571 cgccgccgcctctccgctccccttcgcc 31544
>gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome 9, complete sequence Length = 190832 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 97971 gggggatggggagggggagg 97952
>gb|L32832.1|HUMZFHP Homo sapiens zinc finger homeodomain protein (ATBF1-A) mRNA, complete cds Length = 11893 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cccctcctccgcttcccgccacgc 200 ||||||||||||||||| |||||| Sbjct: 11485 cccctcctccgcttccccccacgc 11508
>gb|AC157953.2| Gallus gallus BAC clone CH261-93C23 from chromosome unknown, complete sequence Length = 231813 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gcctcgggggatggggaggg 271 |||||||||||||||||||| Sbjct: 132070 gcctcgggggatggggaggg 132051
>gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, complete sequence Length = 183998 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 57539 gggggatggggagggggagg 57558
>gb|BC028567.2| Homo sapiens chromosome 1 open reading frame 21, mRNA (cDNA clone MGC:16172 IMAGE:3635521), complete cds Length = 1613 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gccgcgcgccgccgcctccc 147 |||||||||||||||||||| Sbjct: 102 gccgcgcgccgccgcctccc 121
>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence Length = 215189 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 137893 gggggatggggagggggagg 137912
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 29789 gggggatggggagggggagg 29808
>gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229681 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 55566 gggggatggggagggggagg 55585
>emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chromosome 4, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 151546 gggggatggggagggggagg 151527
>emb|AL772196.13| Mouse DNA sequence from clone RP23-358M21 on chromosome 4, complete sequence Length = 238016 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 108006 gggggatggggagggggagg 108025
>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete sequence Length = 187252 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggggatggggagggggagg 276 |||||||||||||||||||| Sbjct: 110502 gggggatggggagggggagg 110521
>emb|AL834531.1|HSM805654 Homo sapiens mRNA; cDNA DKFZp434M1411 (from clone DKFZp434M1411) Length = 2626 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 cctcgggggatggggagggggagg 276 |||||||||| ||||||||||||| Sbjct: 693 cctcgggggagggggagggggagg 670
>dbj|D10250.1|HUMAFPEBP Homo sapiens mRNA for alpha-fetoprotein enhancer binding protein, complete cds Length = 8588 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cccctcctccgcttcccgccacgc 200 ||||||||||||||||| |||||| Sbjct: 8181 cccctcctccgcttccccccacgc 8204
>dbj|AP002770.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-707G14, complete sequences Length = 192961 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ccgcgcgccgccgcctccccgctc 152 |||||||||||| ||||||||||| Sbjct: 40254 ccgcgcgccgccacctccccgctc 40231 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,778,187 Number of Sequences: 3902068 Number of extensions: 1778187 Number of successful extensions: 73835 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70464 Number of HSP's gapped (non-prelim): 3371 length of query: 277 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 255 effective length of database: 17,147,199,772 effective search space: 4372535941860 effective search space used: 4372535941860 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
