Clone Name | bastl09g03 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104603.1| Zea mays PCO113315 mRNA sequence Length = 1601 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 40 tccccccaccgccgccgctgccgctgccgcct 71 ||||||||||||| |||||||||||||||||| Sbjct: 132 tccccccaccgccaccgctgccgctgccgcct 163
>gb|AY017951.1| Oryza sativa microsatellite MRG0276 containing (AG)X17, genomic sequence Length = 234 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcct 71 ||||||||||||||||||||||||||| Sbjct: 37 ccaccgccgccgctgccgctgccgcct 11
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcct 71 ||||||||||||||||||||||||||| Sbjct: 24190833 ccaccgccgccgctgccgctgccgcct 24190859 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||| |||||||||||| Sbjct: 28815372 ccaccgccgccgccgccgctgccgcc 28815397 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccg 68 |||||||| ||||||||||||||| Sbjct: 30577240 ccaccgcctccgctgccgctgccg 30577217 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccg 68 |||||||||||||||||||| Sbjct: 5174482 cgccgccgctgccgctgccg 5174501
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcct 71 ||||||||||||||||||||||||||| Sbjct: 20922 ccaccgccgccgctgccgctgccgcct 20948
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcct 71 ||||||||||||||||||||||||||| Sbjct: 124291 ccaccgccgccgctgccgctgccgcct 124317
>dbj|AK070178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046O09, full insert sequence Length = 2200 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcct 71 ||||||||||||||||||||||||||| Sbjct: 91 ccaccgccgccgctgccgctgccgcct 117
>gb|AC084043.4|AC084043 Mus musculus 1 BAC RP23-265D16 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 63324 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgcc 70 ||||| ||||||||||||||||||||||| Sbjct: 39611 cccccgccgccgccgctgccgctgccgcc 39639 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgc 69 |||||||| ||||||| ||||||||||| Sbjct: 39605 cccccacccccgccgccgccgctgccgc 39632
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgcc 70 ||||| ||||||||||||||||||||||| Sbjct: 121916 cccccgccgccgccgctgccgctgccgcc 121888 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgc 69 |||||||| ||||||| ||||||||||| Sbjct: 121922 cccccacccccgccgccgccgctgccgc 121895
>dbj|AK105280.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-C02, full insert sequence Length = 1384 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 30 ctccgtcccgtccccccaccgccgccgctgccgctgc 66 ||||| ||| ||||||| ||||||||||||||||||| Sbjct: 49 ctccggcccctccccccgccgccgccgctgccgctgc 85
>gb|AC115893.10| Mus musculus chromosome 1, clone RP24-442I13, complete sequence Length = 153053 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgcc 70 ||||| ||||||||||||||||||||||| Sbjct: 19104 cccccgccgccgccgctgccgctgccgcc 19076 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgc 69 |||||||| ||||||| ||||||||||| Sbjct: 19110 cccccacccccgccgccgccgctgccgc 19083
>ref|NM_196653.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0012D19.14), mRNA Length = 1452 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1115 ccgccgccgctgccgctgccgcct 1092
>ref|XM_469379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 693 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 accgccgccgctgccgctgccgcc 70 |||||||||||||||||||||||| Sbjct: 617 accgccgccgctgccgctgccgcc 594
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19, complete sequence Length = 153276 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 69081 ccgccgccgctgccgctgccgcct 69104
>ref|XM_422273.1| PREDICTED: Gallus gallus similar to vesicle amine transport protein 1; membrane protein of cholinergic synaptic vesicles; synaptic vesicle membrane protein VAT-1 homolog (LOC424430), mRNA Length = 1214 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||| |||||||||||| Sbjct: 40 ccccaccgccgccgccgccgctgccgcc 13
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 accgccgccgctgccgctgccgcc 70 |||||||||||||||||||||||| Sbjct: 27653626 accgccgccgctgccgctgccgcc 27653603 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 35482459 ccgccgccgctgccgctgccgcc 35482437 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||||| |||||| Sbjct: 33769638 ccaccgccgccgctgccgccgccgcc 33769663 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 30440589 ccgccgccgctgccgctgccgc 30440610 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgc 69 ||||||||||||| ||||||||||| Sbjct: 35182380 ccaccgccgccgccgccgctgccgc 35182356 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 35182371 ccgccgccgctgccgctgccg 35182351 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 34522169 ccgccgccgctgccgctgccg 34522149 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgc 69 ||||||||||||||||||||| Sbjct: 32356337 cgccgccgctgccgctgccgc 32356357 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 caccgccgccgctgccgctgccgcc 70 |||||||||||| |||||||||||| Sbjct: 27569549 caccgccgccgccgccgctgccgcc 27569573 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 caccgccgccgctgccgctgccgcc 70 |||| |||||||||||||||||||| Sbjct: 24640830 caccaccgccgctgccgctgccgcc 24640806 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgc 69 ||||||||||||||||||||| Sbjct: 3960508 cgccgccgctgccgctgccgc 3960488 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcc 70 |||||||||||||||||||| Sbjct: 14750997 ccgccgctgccgctgccgcc 14751016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccg 68 |||||||||||||||||||| Sbjct: 8540883 cgccgccgctgccgctgccg 8540864 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 caccgccgccgctgccgctgccgc 69 |||||||||||| ||||||||||| Sbjct: 1916951 caccgccgccgccgccgctgccgc 1916928
>ref|XM_845630.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 3 (LOC481281), mRNA Length = 1653 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1105 ccgccgccgctgccgctgccgcct 1128
>ref|XM_857049.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 9 (LOC481281), mRNA Length = 1974 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1426 ccgccgccgctgccgctgccgcct 1449
>ref|XM_857022.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 8 (LOC481281), mRNA Length = 1656 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1108 ccgccgccgctgccgctgccgcct 1131
>ref|XM_538402.2| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 1 (LOC481281), mRNA Length = 1511 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1065 ccgccgccgctgccgctgccgcct 1088
>ref|XM_856962.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 7 (LOC481281), mRNA Length = 1583 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1137 ccgccgccgctgccgctgccgcct 1160
>ref|XM_856936.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 6 (LOC481281), mRNA Length = 671 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 225 ccgccgccgctgccgctgccgcct 248
>ref|XM_856903.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 5 (LOC481281), mRNA Length = 1553 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1443 ccgccgccgctgccgctgccgcct 1466
>ref|XM_856874.1| PREDICTED: Canis familiaris similar to RNA-binding protein 9 (RNA binding motif protein 9) (Hexaribonucleotide binding protein 2) (Repressor of tamoxifen transcriptional activity), transcript variant 4 (LOC481281), mRNA Length = 2031 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 1483 ccgccgccgctgccgctgccgcct 1506
>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3 Contains the gene for nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624), a novel gene (FLJ31318), the MRPL41 gene for mitochondrial ribosomal protein L41 (RPML27, MRP-L270), a novel gene (LOC9271), the gene for melanin-concentrating hormone receptor 1 interacting zinc-finger protein (ZMYND17) (MIZIP), a novel gene (MGC40555), a novel protein and eleven CpG islands, complete sequence Length = 174995 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 39 gtccccccaccgccgccgctgccgctgccgcc 70 |||||||| |||||||||| |||||||||||| Sbjct: 173869 gtccccccgccgccgccgccgccgctgccgcc 173900
>emb|AJ308233.1|TNI308233 Tetraodon nigroviridis aw502783-like gene (partial), af290615-like gene, ak000823-like gene, vav-3 gene, amylase-1 gene, amylase-2 gene and amylase-3 gene Length = 148106 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||| |||||||||||||||||| Sbjct: 37227 ccccaccgctgccgctgccgctgccgcc 37254
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 114670 ccgccgccgctgccgctgccgcct 114693
>ref|NM_001277.2| Homo sapiens choline kinase alpha (CHKA), transcript variant 1, mRNA Length = 2733 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgc 69 ||||| |||||||||||||||||||||| Sbjct: 386 ccccctccgccgccgctgccgctgccgc 413
>ref|NM_212469.1| Homo sapiens choline kinase alpha (CHKA), transcript variant 2, mRNA Length = 2679 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgc 69 ||||| |||||||||||||||||||||| Sbjct: 386 ccccctccgccgccgctgccgctgccgc 413
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 15010462 ccgccgccgctgccgctgccgcct 15010485 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 22477719 ccgccgccgctgccgctgccgcc 22477697 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||| ||||||||||||||||||||| Sbjct: 21523675 ccgctgccgctgccgctgccgccttg 21523650 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||| ||||| |||||| Sbjct: 11526483 ccccccaccgccgccgccgccgccgccgcc 11526454 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 3972387 ccgccgccgctgccgctgccgc 3972408 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgc 69 |||||||||||||||| ||||| ||||| Sbjct: 21749176 cccccaccgccgccgccgccgccgccgc 21749149 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcctt 72 |||||| |||||| |||||||||||||| Sbjct: 16430002 ccaccggcgccgccgccgctgccgcctt 16430029 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cgccgctgccgctgccgcct 71 |||||||||||||||||||| Sbjct: 8018130 cgccgctgccgctgccgcct 8018149
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 accgccgccgctgccgctgccgcc 70 |||||||||||||||||||||||| Sbjct: 27744949 accgccgccgctgccgctgccgcc 27744926 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 35572531 ccgccgccgctgccgctgccgcc 35572509 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||||| |||||| Sbjct: 33860110 ccaccgccgccgctgccgccgccgcc 33860135 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 30532011 ccgccgccgctgccgctgccgc 30532032 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgc 69 ||||||||||||| ||||||||||| Sbjct: 35272452 ccaccgccgccgccgccgctgccgc 35272428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 35272443 ccgccgccgctgccgctgccg 35272423 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 34612241 ccgccgccgctgccgctgccg 34612221 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgc 69 ||||||||||||||||||||| Sbjct: 32446847 cgccgccgctgccgctgccgc 32446867 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 caccgccgccgctgccgctgccgcc 70 |||||||||||| |||||||||||| Sbjct: 27660872 caccgccgccgccgccgctgccgcc 27660896 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 caccgccgccgctgccgctgccgcc 70 |||| |||||||||||||||||||| Sbjct: 24558299 caccaccgccgctgccgctgccgcc 24558275 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgc 69 ||||||||||||||||||||| Sbjct: 3960619 cgccgccgctgccgctgccgc 3960599 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcc 70 |||||||||||||||||||| Sbjct: 14745531 ccgccgctgccgctgccgcc 14745550 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccg 68 |||||||||||||||||||| Sbjct: 8538718 cgccgccgctgccgctgccg 8538699 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 caccgccgccgctgccgctgccgc 69 |||||||||||| ||||||||||| Sbjct: 1916949 caccgccgccgccgccgctgccgc 1916926
>emb|BX932524.1| Gallus gallus finished cDNA, clone ChEST633c19 Length = 1043 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||| |||||||||||| Sbjct: 40 ccccaccgccgccgccgccgctgccgcc 13
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 accgccgccgctgccgctgccgcc 70 |||||||||||||||||||||||| Sbjct: 95323 accgccgccgctgccgctgccgcc 95300 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 caccgccgccgctgccgctgccgcc 70 |||||||||||| |||||||||||| Sbjct: 11246 caccgccgccgccgccgctgccgcc 11270
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 21342 ccgccgccgctgccgctgccgcct 21365
>dbj|AP002992.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2655K5, complete sequence Length = 191589 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgc 69 ||||| |||||||||||||||||||||| Sbjct: 49239 ccccctccgccgccgctgccgctgccgc 49212
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcct 71 |||||||||||||||||||||||| Sbjct: 15018703 ccgccgccgctgccgctgccgcct 15018726 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 22490187 ccgccgccgctgccgctgccgcc 22490165 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||| ||||||||||||||||||||| Sbjct: 21535338 ccgctgccgctgccgctgccgccttg 21535313 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||| ||||| |||||| Sbjct: 11532923 ccccccaccgccgccgccgccgccgccgcc 11532894 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 3972308 ccgccgccgctgccgctgccgc 3972329 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgc 69 |||||||||||||||| ||||| ||||| Sbjct: 21760839 cccccaccgccgccgccgccgccgccgc 21760812 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcctt 72 |||||| |||||| |||||||||||||| Sbjct: 16438243 ccaccggcgccgccgccgctgccgcctt 16438270 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cgccgctgccgctgccgcct 71 |||||||||||||||||||| Sbjct: 8023229 cgccgctgccgctgccgcct 8023248
>gb|BC036471.2| Homo sapiens choline kinase alpha, mRNA (cDNA clone MGC:41867 IMAGE:5265994), complete cds Length = 1622 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgc 69 ||||| |||||||||||||||||||||| Sbjct: 264 ccccctccgccgccgctgccgctgccgc 291
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 40 tccccccaccgccgccgctgccgctgcc 67 ||||||||||||||| |||||||||||| Sbjct: 1812248 tccccccaccgccgctgctgccgctgcc 1812275
>dbj|D10704.1|HUMCK1 Human mRNA for choline kinase Length = 2408 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgc 69 ||||| |||||||||||||||||||||| Sbjct: 196 ccccctccgccgccgctgccgctgccgc 223
>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete sequence Length = 197843 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 109079 ccgccgccgctgccgctgccgcc 109057
>ref|XM_482642.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 308 ccgccgccgctgccgctgccgcc 330
>ref|XM_464103.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1535 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 43 ccgccgccgctgccgctgccgcc 65
>ref|NM_197890.1| Oryza sativa (japonica cultivar-group) putative hydroxyproline-rich glycoprotein (OSJNBa0027L23.23), mRNA Length = 1395 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1034 ccgccgccgctgccgctgccgcc 1056
>ref|NM_185173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 771 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 56 ccgccgccgctgccgctgccgcc 78
>ref|NM_006560.2| Homo sapiens CUG triplet repeat, RNA binding protein 1 (CUGBP1), transcript variant 1, mRNA Length = 2157 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 39 ccgccgccgctgccgctgccgcc 17
>ref|XM_472220.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2253 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 37 ccgccgccgctgccgctgccgcc 15
>gb|BC059885.1| Mus musculus amine oxidase (flavin containing) domain 2, mRNA (cDNA clone MGC:69806 IMAGE:6815975), complete cds Length = 2999 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 174 ccgccgccgctgccgctgccgcc 152
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 130883 ccgccgccgctgccgctgccgcc 130905
>ref|XM_869719.1| PREDICTED: Bos taurus similar to CG17265-PA (LOC617455), mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 37 ccgccgccgctgccgctgccgcc 15
>gb|AC148878.2| Chlamydomonas reinhardtii clone cr-29B2, complete sequence Length = 64153 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 33495 ccgccgccgctgccgctgccgcc 33473
>ref|NM_183298.1| Mus musculus forkhead box E1 (thyroid transcription factor 2) (Foxe1), mRNA Length = 1116 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 506 ccgccgccgctgccgctgccgcc 528
>gb|AF525691.2| Chlamydomonas reinhardtii RNA polymerase sigma factor (RpoD) gene, complete cds; nuclear gene for chloroplast product Length = 5013 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 3916 ccgccgccgctgccgctgccgcc 3938
>ref|XM_983991.1| PREDICTED: Mus musculus SRY-box containing gene 30 (Sox30), mRNA Length = 2196 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 560 ccgccgccgctgccgctgccgcc 582
>ref|XM_977082.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1 (Prdm13), mRNA Length = 3458 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1887 ccgccgccgctgccgctgccgcc 1865
>ref|XM_977119.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2 (Prdm13), mRNA Length = 3108 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1537 ccgccgccgctgccgctgccgcc 1515
>ref|XM_920394.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 4 (Prdm13), mRNA Length = 3476 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1905 ccgccgccgctgccgctgccgcc 1883
>ref|XM_907402.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 3 (Prdm13), mRNA Length = 3126 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1555 ccgccgccgctgccgctgccgcc 1533
>ref|XM_131309.6| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1 (Prdm13), mRNA Length = 3458 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1887 ccgccgccgctgccgctgccgcc 1865
>ref|XM_884367.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2 (Prdm13), mRNA Length = 3108 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1537 ccgccgccgctgccgctgccgcc 1515
>ref|XM_130764.7| PREDICTED: Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf4a), mRNA Length = 4422 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 413 ccgccgccgctgccgctgccgcc 435
>ref|XM_754482.1| Ustilago maydis 521 hypothetical protein (UM03428.1) partial mRNA Length = 2121 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 acgacgacaatgacgatgatgat 260 ||||||||||||||||||||||| Sbjct: 1052 acgacgacaatgacgatgatgat 1074
>gb|BC017632.1| Mus musculus PR domain containing 13, mRNA (cDNA clone IMAGE:4507465), containing frame-shift errors Length = 3271 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1887 ccgccgccgctgccgctgccgcc 1865
>gb|AC110233.9| Mus musculus chromosome 6, clone RP23-68H1, complete sequence Length = 151295 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 53163 ccgccgccgctgccgctgccgcc 53185
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 93796 ccgccgccgctgccgctgccgcc 93774
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 112082 ccgccgccgctgccgctgccgcc 112060
>emb|AJ627180.1| Chlamydomonas reinhardtii sig1 gene for sigma-like transcription factor, exons 1-4 Length = 6047 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 5179 ccgccgccgctgccgctgccgcc 5201
>emb|AJ457047.2|MMU457047 Mus musculus Foxe1 gene for forkhead box E1 Length = 2606 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1784 ccgccgccgctgccgctgccgcc 1806
>emb|AJ243485.1|MMU243485 Mus Musculus mRNA for AMMECR1 protein Length = 1819 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 302 ccgccgccgctgccgctgccgcc 280
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 204892 ccgccgccgctgccgctgccgcc 204914
>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence Length = 215150 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcct 71 ||||||||||||||||||||||| Sbjct: 58928 cgccgccgctgccgctgccgcct 58906
>gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, complete sequence Length = 202539 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 177571 ccgccgccgctgccgctgccgcc 177593
>emb|Z79582.1|MMLAZ3 M.musculus LAZ3/BCL6 gene, first intron Length = 4138 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 1638 ccgccgccgctgccgctgccgcc 1660
>ref|NM_139585.2| Drosophila melanogaster CG10853-RA (CG10853), mRNA Length = 565 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcct 71 |||||||||||||||| |||||||||| Sbjct: 459 ccaccgccgccgctgctgctgccgcct 433
>gb|AY075437.1| Drosophila melanogaster LP09837 full length cDNA Length = 615 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcct 71 |||||||||||||||| |||||||||| Sbjct: 459 ccaccgccgccgctgctgctgccgcct 433
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 130142 ccgccgccgctgccgctgccgcc 130120
>ref|NM_175312.2| Mus musculus RIKEN cDNA B630005N14 gene (B630005N14Rik), mRNA Length = 3880 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 124 ccgccgccgctgccgctgccgcc 102
>ref|NM_052829.1| Rattus norvegicus regulating synaptic membrane exocytosis 1 (Rims1), mRNA Length = 5655 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 280 ccgccgccgctgccgctgccgcc 302
>emb|AL672159.14| Mouse DNA sequence from clone RP23-145B5 on chromosome 4, complete sequence Length = 101291 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 61198 ccgccgccgctgccgctgccgcc 61220
>dbj|AK170526.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630106M02 product:hypothetical protein, full insert sequence Length = 4463 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 96 ccgccgccgctgccgctgccgcc 74
>gb|AC023680.3| Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186218 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcct 71 |||||||||||||||| |||||||||| Sbjct: 35970 ccaccgccgccgctgctgctgccgcct 35944
>dbj|AK046745.1| Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched library, clone:B630005N14 product:CDNA FLJ31818 FIS, CLONE NT2RP6000017 homolog [Homo sapiens], full insert sequence Length = 3880 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 124 ccgccgccgctgccgctgccgcc 102
>dbj|AK051736.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130069E16 product:Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human), full insert sequence Length = 3109 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 302 ccgccgccgctgccgctgccgcc 280
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 26206611 ccgccgccgctgccgctgccgcc 26206589 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 18531455 ccgccgccgctgccgctgccgcc 18531433 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccaccgccgccgctgccgct 64 ||||||||||||||||||||| Sbjct: 33781908 cccaccgccgccgctgccgct 33781888 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgcc 70 |||||||||||||||| ||||| |||||| Sbjct: 27477991 cccccaccgccgccgccgccgccgccgcc 27478019 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccg 68 |||||||||||||||||||| Sbjct: 29491035 cgccgccgctgccgctgccg 29491054 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccg 68 ||||||||||||| |||||||||| Sbjct: 18731468 ccaccgccgccgccgccgctgccg 18731491
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 26172300 ccgccgccgctgccgctgccgcc 26172322 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 tccccccaccgccgccgctgcc 61 |||||||||||||||||||||| Sbjct: 25960611 tccccccaccgccgccgctgcc 25960632 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 22696085 ccgccgccgctgccgctgccgc 22696106 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||||||||| ||||||||||||||| Sbjct: 5070004 ccgccgccgccgccgctgccgccttg 5069979 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcct 71 ||||||||||||||||||||| Sbjct: 22895549 ccgccgctgccgctgccgcct 22895569 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cgccgctgccgctgccgcctt 72 ||||||||||||||||||||| Sbjct: 6656721 cgccgctgccgctgccgcctt 6656701 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgcc 70 |||||||||||||||| ||||| |||||| Sbjct: 3878379 cccccaccgccgccgccgccgccgccgcc 3878407 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||| ||||| |||||| Sbjct: 18962917 ccccaccgccgccgccgccgccgccgcc 18962944 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgct 64 |||||||||||||||||||| Sbjct: 6968038 ccaccgccgccgctgccgct 6968019 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cccaccgccgccgctgccgc 63 |||||||||||||||||||| Sbjct: 694110 cccaccgccgccgctgccgc 694091
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 tccccccaccgccgccgctgccg 62 ||||||||||||||||||||||| Sbjct: 14531547 tccccccaccgccgccgctgccg 14531569 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcc 70 |||||||||||||||||||| Sbjct: 13942684 ccgccgctgccgctgccgcc 13942703 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccg 68 ||||||||||||||||||| |||| Sbjct: 12574461 ccaccgccgccgctgccgccgccg 12574438
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 21594812 ccgccgccgctgccgctgccgcc 21594834 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 22488473 ccgccgccgctgccgctgccgc 22488494 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 20695324 ccgccgccgctgccgctgccgc 20695303 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 2109656 ccaccgctgccgctgccgctgccgcc 2109631 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgc 69 ||||||||||||||||||| ||||| Sbjct: 23346774 ccaccgccgccgctgccgccgccgc 23346798 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 530083 ccgccgccgctgccgctgccg 530063 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgcc 61 |||||||||||||||||||| Sbjct: 26140207 cccccaccgccgccgctgcc 26140188 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 |||| |||||||||| |||||||||||| Sbjct: 23995958 ccccgccgccgccgccgccgctgccgcc 23995985 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gccgccgctgccgctgccgc 69 |||||||||||||||||||| Sbjct: 19183719 gccgccgctgccgctgccgc 19183700 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgcc 67 |||||||||||||||||||| Sbjct: 10675432 ccgccgccgctgccgctgcc 10675413 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgc 69 |||||||||||||||| ||||| ||||| Sbjct: 4694402 cccccaccgccgccgccgccgccgccgc 4694429
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 2242558 ccgccgccgctgccgctgccgcc 2242536 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 11482838 ccgccgccgctgccgctgccgc 11482817 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gccgccgctgccgctgccgcc 70 ||||||||||||||||||||| Sbjct: 23630013 gccgccgctgccgctgccgcc 23629993 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 37 ccgtccccccaccgccgccgctgccgctgccgc 69 ||||||| ||||||||||||||| |||||||| Sbjct: 20909482 ccgtcccgtcaccgccgccgctgctgctgccgc 20909514 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 4414688 ccgccgccgctgccgctgccg 4414668
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 40 tccccccaccgccgccgctgccgctgc 66 ||||||| ||||||||||||||||||| Sbjct: 19093066 tccccccgccgccgccgctgccgctgc 19093040 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||||||||| ||||||||||||||| Sbjct: 16688269 ccgccgccgccgccgctgccgccttg 16688294 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 accgccgccgctgccgctgccgcc 70 ||||||||||| |||||||||||| Sbjct: 41706170 accgccgccgccgccgctgccgcc 41706193 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||| ||||| |||||| Sbjct: 40183886 ccccaccgccgccgccgccgcggccgcc 40183913 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gccgccgctgccgctgccgc 69 |||||||||||||||||||| Sbjct: 28875243 gccgccgctgccgctgccgc 28875224 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cgccgctgccgctgccgcct 71 |||||||||||||||||||| Sbjct: 28596449 cgccgctgccgctgccgcct 28596468 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 ccgccgctgccgctgccgcc 70 |||||||||||||||||||| Sbjct: 2929902 ccgccgctgccgctgccgcc 2929883
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 40 tccccccaccgccgccgctgccgctgc 66 ||||||| ||||||||||||||||||| Sbjct: 58483 tccccccgccgccgccgctgccgctgc 58457
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 5167 ccgccgccgctgccgctgccgcc 5189
>ref|XM_343139.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA G431002C21 (predicted) (LOC362811), mRNA Length = 6602 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 45 ccgccgccgctgccgctgccgcc 67
>ref|XM_575481.1| PREDICTED: Rattus norvegicus similar to transcription factor HOXA13 (LOC500129), mRNA Length = 2441 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 183 ccgccgccgctgccgctgccgcc 161
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 15422 ccgccgccgctgccgctgccgcc 15400
>gb|AY005801.1| Mus musculus Sox-30 mRNA, complete cds Length = 3074 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 345 ccgccgccgctgccgctgccgcc 367
>gb|AF199333.1|AF199333 Rattus norvegicus RIM1B (Rim1B) mRNA, complete cds Length = 5841 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 280 ccgccgccgctgccgctgccgcc 302
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 tccccccaccgccgccgctgccg 62 ||||||||||||||||||||||| Sbjct: 29836 tccccccaccgccgccgctgccg 29858
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 29507 ccgccgccgctgccgctgccgcc 29485
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 54986 ccgccgccgctgccgctgccgcc 55008
>dbj|AK106138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G06, full insert sequence Length = 1325 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 688 ccgccgccgctgccgctgccgcc 710
>dbj|AK106374.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D01, full insert sequence Length = 1535 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 43 ccgccgccgctgccgctgccgcc 65
>dbj|AK103349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126F21, full insert sequence Length = 2005 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 315 ccgccgccgctgccgctgccgcc 293
>dbj|AK065694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035D10, full insert sequence Length = 2751 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 140 ccgccgccgctgccgctgccgcc 118
>gb|AY744676.1| Carollia perspicillata HOXD13 (Hoxd13) and HOXD12 (Hoxd12) genes, complete cds Length = 20332 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 7373 ccgccgccgctgccgctgccgcc 7351
>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete sequence Length = 309958 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcct 71 |||||||||||||||| |||||||||| Sbjct: 262599 ccaccgccgccgctgctgctgccgcct 262573
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 accgccgccgctgccgctgccgc 69 ||||||||||||||||||||||| Sbjct: 1324968 accgccgccgctgccgctgccgc 1324946 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcc 70 |||||||||||||||||||| Sbjct: 3395539 ccgccgctgccgctgccgcc 3395558 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 gccggccgacgcgccggacacgcg 155 |||||||| ||||||||||||||| Sbjct: 245808 gccggccggcgcgccggacacgcg 245831
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 26100476 ccgccgccgctgccgctgccgcc 26100498 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 tccccccaccgccgccgctgcc 61 |||||||||||||||||||||| Sbjct: 25888789 tccccccaccgccgccgctgcc 25888810 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 22624276 ccgccgccgctgccgctgccgc 22624297 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||||||||| ||||||||||||||| Sbjct: 5069986 ccgccgccgccgccgctgccgccttg 5069961 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcct 71 ||||||||||||||||||||| Sbjct: 22823740 ccgccgctgccgctgccgcct 22823760 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cgccgctgccgctgccgcctt 72 ||||||||||||||||||||| Sbjct: 6656596 cgccgctgccgctgccgcctt 6656576 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 cccccaccgccgccgctgccgctgccgcc 70 |||||||||||||||| ||||| |||||| Sbjct: 3878353 cccccaccgccgccgccgccgccgccgcc 3878381 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||| ||||| |||||| Sbjct: 18889144 ccccaccgccgccgccgccgccgccgcc 18889171 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgct 64 |||||||||||||||||||| Sbjct: 6967917 ccaccgccgccgctgccgct 6967898 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cccaccgccgccgctgccgc 63 |||||||||||||||||||| Sbjct: 694110 cccaccgccgccgctgccgc 694091
>emb|AL731548.13| Mouse DNA sequence from clone RP23-71M18 on chromosome X, complete sequence Length = 218612 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 29616 ccgccgccgctgccgctgccgcc 29638
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 62538 ccgccgccgctgccgctgccgcc 62560
>ref|NM_133872.1| Mus musculus amine oxidase (flavin containing) domain 2 (Aof2), mRNA Length = 2999 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 174 ccgccgccgctgccgctgccgcc 152
>ref|NM_019496.2| Mus musculus Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) (Ammecr1), mRNA Length = 3109 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 302 ccgccgccgctgccgctgccgcc 280
>gb|AF007836.1|AF007836 Rattus norvegicus rab3 effector (RIM) mRNA, alternatively spliced, complete cds Length = 5655 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 280 ccgccgccgctgccgctgccgcc 302
>ref|NM_173384.1| Mus musculus SRY-box containing gene 30 (Sox30), mRNA Length = 3074 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 345 ccgccgccgctgccgctgccgcc 367
>emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chromosome 4, complete sequence Length = 201741 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 65286 ccgccgccgctgccgctgccgcc 65308
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 97108 ccgccgccgctgccgctgccgcc 97086
>emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chromosome 4, complete sequence Length = 217762 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcc 70 ||||||||||||||||||||||| Sbjct: 171655 ccgccgccgctgccgctgccgcc 171677
>gb|AC120405.7| Mus musculus chromosome 1, clone RP24-409F22, complete sequence Length = 158876 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 78144 cgccgccgctgccgctgccgcc 78123
>gb|AY665388.1| Drosophila lutescens CG4928 mRNA, partial cds Length = 1545 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||||||||| ||||||||||||||| Sbjct: 1478 ccgccgccgcagccgctgccgccttg 1503
>gb|AY665387.1| Drosophila erecta CG4928 mRNA, partial cds Length = 1542 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1475 ccgccgccgctgccgctgccgc 1496
>ref|XM_482777.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 740 ccgccgccgctgccgctgccgc 719
>ref|XM_482505.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 535 ccgccgccgctgccgctgccgc 556
>ref|XM_479991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 715 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 144 ccaccgctgccgctgccgctgccgcc 119
>ref|XM_507126.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1613_G04.25 mRNA Length = 916 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 318 ccaccgctgccgctgccgctgccgcc 293
>ref|XM_508090.1| PREDICTED: Pan troglodytes similar to homeodomain protein (LOC450798), mRNA Length = 2142 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1259 ccgccgccgctgccgctgccgc 1280
>ref|NM_194979.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0042K08.9), mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 50 ccgccgccgctgccgctgccgc 29
>ref|XM_470064.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1656 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||||| |||||| Sbjct: 164 ccaccgccgccgctgccgccgccgcc 139
>gb|DQ217171.1| Taeniopygia guttata clone 0058P0033B10 small nuclear ribonucleoprotein polypeptide B variant 1-like mRNA, complete sequence Length = 980 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 40 tccccccaccgccgccgctgccgctgccgc 69 ||||||| |||||||||||||||| ||||| Sbjct: 81 tccccccgccgccgccgctgccgccgccgc 52
>gb|DQ213141.1| Taeniopygia guttata clone 0058P0034D11 RNA polymerase I 16 kDa polypeptide-like mRNA, complete sequence Length = 1154 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 48 ccgccgccgctgccgctgccgc 27
>ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1371 ccgccgccgctgccgctgccgc 1350
>ref|NM_001003250.1| Canis familiaris fucosidase, alpha-L- 1, tissue (FUCA1), mRNA Length = 2040 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 46 ccgccgccgctgccgctgccgc 67
>ref|NM_197732.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0042H09.7), mRNA Length = 1781 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||| ||||||||||||||||||||| Sbjct: 113 ccgctgccgctgccgctgccgccttg 138
>ref|NM_196163.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBa0095C06.14), mRNA Length = 888 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||| ||||| |||||| Sbjct: 153 ccccccaccgccgccgccgccgccgccgcc 124
>ref|NM_189265.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||||||||| ||||||||||||||| Sbjct: 410 ccgccgccgccgccgctgccgccttg 385
>ref|XM_469731.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 65 ccgccgccgctgccgctgccgc 44
>ref|XM_476521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 255 cgccgccgctgccgctgccgcc 234
>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 225524 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 acgacgacaatgacgatgatgatacc 263 |||||||| ||||||||||||||||| Sbjct: 59858 acgacgacgatgacgatgatgatacc 59883
>gb|AY022132.1| Oryza sativa microsatellite MRG4457 containing (TC)X18, closest to marker C905, genomic sequence Length = 236 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 216 ccaccgctgccgctgccgctgccgcc 191
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 cccaccgccgccgctgccgctg 65 |||||||||||||||||||||| Sbjct: 390419 cccaccgccgccgctgccgctg 390440
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 89808 cgccgccgctgccgctgccgcc 89787
>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence Length = 175357 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 cccaccgccgccgctgccgctg 65 |||||||||||||||||||||| Sbjct: 42235 cccaccgccgccgctgccgctg 42256
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||| |||||||||||||||||||| Sbjct: 72121 ccaccaccgccgctgccgctgccgcc 72146
>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 87155 ccgccgccgctgccgctgccgc 87176
>gb|AY704411.1| Cryptococcus curvatus delta-12 fatty acid desaturase mRNA, complete cds Length = 1661 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 1406 cgccgccgctgccgctgccgcc 1385
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 acgacgacaatgacgatgatgatacc 263 |||||||| ||||||||||||||||| Sbjct: 162545 acgacgacgatgacgatgatgatacc 162570
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 cccaccgccgccgctgccgctg 65 |||||||||||||||||||||| Sbjct: 22369 cccaccgccgccgctgccgctg 22390
>ref|XM_615852.2| PREDICTED: Bos taurus similar to Proto-oncogene tyrosine-protein kinase Src (p60-Src) (c-Src) (pp60c-src), transcript variant 1 (LOC535742), mRNA Length = 1691 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgcct 71 |||||||||||||||| ||||| ||||||| Sbjct: 107 cccccaccgccgccgccgccgccgccgcct 78
>ref|XM_869112.1| PREDICTED: Bos taurus similar to Proto-oncogene tyrosine-protein kinase Src (p60-Src) (c-Src) (pp60c-src), transcript variant 3 (LOC535742), mRNA Length = 1709 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgccgcct 71 |||||||||||||||| ||||| ||||||| Sbjct: 107 cccccaccgccgccgccgccgccgccgcct 78
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||| |||||||||||||||||||| Sbjct: 14782 ccaccaccgccgctgccgctgccgcc 14807
>ref|NM_152663.2| Homo sapiens Ral GEF with PH domain and SH3 binding motif 2 (RALGPS2), transcript variant 2, mRNA Length = 2458 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 116 ccgccgccgctgccgctgccgc 95
>ref|NM_018037.1| Homo sapiens Ral GEF with PH domain and SH3 binding motif 2 (RALGPS2), transcript variant 1, mRNA Length = 1894 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 37 ccgccgccgctgccgctgccgc 16
>gb|AY033464.1| Zea diploperennis isolate phi121-DIP-LJ1 microsatellite sequence Length = 102 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 46 cgccgccgctgccgctgccgcc 67
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 73672 ccgccgctgccgctgccgcctt 73693
>gb|AY572425.1| Cryptococcus curvatus delta-12 fatty acid desaturase gene, complete cds Length = 2741 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 2726 cgccgccgctgccgctgccgcc 2705
>gb|BC084581.1| Homo sapiens zinc finger protein 703, mRNA (cDNA clone IMAGE:6195805), complete cds Length = 2047 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 259 ccgccgccgctgccgctgccgc 238
>gb|BC032534.1| Homo sapiens zinc finger protein 703, mRNA (cDNA clone MGC:44951 IMAGE:5527569), complete cds Length = 2144 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 226 ccgccgccgctgccgctgccgc 205
>gb|AY486473.1|AY486470S04 Human herpesvirus 5 strain Toledo genome, partial sequence Length = 29148 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 21306 ccgccgctgccgctgccgcctt 21327
>ref|XM_916631.2| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 2889 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 245 ccgccgccgctgccgctgccgc 266
>ref|XM_355952.4| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 2016 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 281 ccgccgccgctgccgctgccgc 302
>ref|XM_846248.1| PREDICTED: Canis familiaris similar to solute carrier family 25, member 28 (LOC486837), mRNA Length = 1938 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 487 cgccgccgctgccgctgccgcc 466
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||||| |||||| Sbjct: 103602 ccaccgccgccgctgccgccgccgcc 103577
>ref|XM_843953.1| PREDICTED: Canis familiaris similar to zinc finger protein 503, transcript variant 3 (LOC482855), mRNA Length = 2179 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 187 ccgccgccgctgccgctgccgc 166
>ref|XM_852605.1| PREDICTED: Canis familiaris similar to zinc finger protein 503, transcript variant 4 (LOC482855), mRNA Length = 2043 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 84 ccgccgccgctgccgctgccgc 63
>ref|XM_539970.2| PREDICTED: Canis familiaris similar to zinc finger protein 503, transcript variant 1 (LOC482855), mRNA Length = 2106 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 84 ccgccgccgctgccgctgccgc 63
>emb|X52499.1|SSVNTR32 S.scrofa VNTR DNA (clone pHTF32) Length = 264 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||| ||||| |||||| Sbjct: 54 ccccccaccgccgccgccgccgccgccgcc 25
>ref|XM_539166.2| PREDICTED: Canis familiaris similar to adenylate cyclase 8 (LOC482045), mRNA Length = 3842 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 371 ccgccgccgctgccgctgccgc 350
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 148538 ccgccgctgccgctgccgcctt 148517
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence Length = 229209 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 154508 ccgccgctgccgctgccgcctt 154487
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 149932 ccgccgctgccgctgccgcctt 149911
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 154603 ccgccgctgccgctgccgcctt 154582
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 105183 ccgccgctgccgctgccgcctt 105204
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 71879 ccgccgctgccgctgccgcctt 71900
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 66774 ccgccgccgctgccgctgccgc 66795
>ref|XM_805928.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508299.50) partial mRNA Length = 6414 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgc 66 |||||||||||||||||||||| Sbjct: 5746 ccaccgccgccgctgccgctgc 5725
>ref|XM_860083.1| PREDICTED: Canis familiaris similar to solute carrier family 35, member B1, transcript variant 6 (LOC480549), mRNA Length = 1248 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 54 ccgccgccgctgccgctgccgc 75
>ref|XM_860061.1| PREDICTED: Canis familiaris similar to solute carrier family 35, member B1, transcript variant 5 (LOC480549), mRNA Length = 1208 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 54 ccgccgccgctgccgctgccgc 75
>ref|XM_860041.1| PREDICTED: Canis familiaris similar to solute carrier family 35, member B1, transcript variant 4 (LOC480549), mRNA Length = 1268 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 54 ccgccgccgctgccgctgccgc 75
>ref|XM_860020.1| PREDICTED: Canis familiaris similar to solute carrier family 35, member B1, transcript variant 3 (LOC480549), mRNA Length = 1216 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 54 ccgccgccgctgccgctgccgc 75
>ref|XM_537671.2| PREDICTED: Canis familiaris similar to solute carrier family 35, member B1, transcript variant 1 (LOC480549), mRNA Length = 1293 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 54 ccgccgccgctgccgctgccgc 75
>ref|XM_859985.1| PREDICTED: Canis familiaris similar to solute carrier family 35, member B1, transcript variant 2 (LOC480549), mRNA Length = 512 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 54 ccgccgccgctgccgctgccgc 75
>ref|XM_811274.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511181.110) partial mRNA Length = 6669 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgc 66 |||||||||||||||||||||| Sbjct: 6001 ccaccgccgccgctgccgctgc 5980
>ref|XM_799260.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053507789.9) partial mRNA Length = 5746 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 3803 ccaccgctgccgctgccgctgccgcc 3828 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 caccgccgccgctgccgctgccgc 69 ||||||| |||||||||||||||| Sbjct: 3798 caccgccaccgctgccgctgccgc 3821
>ref|NM_006237.2| Homo sapiens POU domain, class 4, transcription factor 1 (POU4F1), mRNA Length = 3824 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 940 ccgccgccgctgccgctgccgc 919
>ref|NM_009723.2| Mus musculus ATPase, Ca++ transporting, plasma membrane 2 (Atp2b2), transcript variant 1, mRNA Length = 7060 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 87 ccgccgccgctgccgctgccgc 66
>gb|BC059840.1| Mus musculus neuron navigator 1, mRNA (cDNA clone MGC:69649 IMAGE:6836774), complete cds Length = 3938 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 251 cgccgccgctgccgctgccgcc 230
>gb|BT001713.1| Drosophila melanogaster RE67722 full insert cDNA Length = 3336 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1865 ccgccgccgctgccgctgccgc 1844
>gb|AY346329.1| Oryza sativa (indica cultivar-group) homeodomain leucine-zipper protein Hox8 mRNA, complete cds Length = 1272 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||| ||||| |||||| Sbjct: 345 ccccccaccgccgccgccgccgccgccgcc 316
>emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chromosome 10 Contains the 5' end of the gene for a novel protein (FLJ40283), a novel gene and two CpG islands, complete sequence Length = 127714 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 80686 cgccgccgctgccgctgccgcc 80665 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gccgccgctgccgctgccgcc 70 ||||||||||||||||||||| Sbjct: 80670 gccgccgctgccgctgccgcc 80650
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 119194 ccgccgccgctgccgctgccgc 119215
>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence Length = 181948 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 88779 ccgccgccgctgccgctgccgc 88800
>emb|AL139398.20| Human DNA sequence from clone RP11-528B10 on chromosome Xp11.21-11.23, complete sequence Length = 125999 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 67160 ccgccgccgctgccgctgccgc 67181
>emb|AL121777.39|HSJ1057D4 Human DNA sequence from clone RP5-1057D4 on chromosome 20 Contains the SRMP1 gene for spermidine synthase pseudogene 1, the 5' end of the gene for a novel protein similar to glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2, KIAA1247) and a CpG island, complete sequence Length = 131888 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 21989 cgccgccgctgccgctgccgcc 22010
>emb|X69911.1|HVCMDAAI H.vulgare gene for CMd subunit of tetrameric alpha-amylase inhibitor Length = 2121 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 780 cgccgccgctgccgctgccgcc 801
>emb|X69939.1|HVBTAI3 H.vulgare BTAI3 mRNA encoding CMd, component of tetrameric alpha-amylase inhibitor Length = 600 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 60 cgccgccgctgccgctgccgcc 81
>emb|X64624.1|HSRDC1MR H.sapiens mRNA for RDC-1 POU domain containing protein Length = 3492 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 725 ccgccgccgctgccgctgccgc 704
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcctt 72 |||||||||||||||||||||| Sbjct: 72383 ccgccgctgccgctgccgcctt 72404
>emb|X13198.1|TACMD Barley mRNA for seed protein CMd Length = 579 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 28 cgccgccgctgccgctgccgcc 49
>gb|AC106128.6| Rattus norvegicus 1 BAC CH230-149H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 210385 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 150969 ccgccgccgctgccgctgccgc 150990
>gb|BC047391.1| Homo sapiens Ral GEF with PH domain and SH3 binding motif 2, transcript variant 2, mRNA (cDNA clone MGC:48311 IMAGE:5298449), complete cds Length = 2458 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 116 ccgccgccgctgccgctgccgc 95
>emb|AJ420748.2|HSA420748 Homo sapiens partial CPT1A gene for carnitine O-palmitoyltransferase 1, promoter region, CDS and slice variants a and b Length = 34753 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 8266 ccgccgccgctgccgctgccgc 8287
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 36426 ccgccgccgctgccgctgccgc 36405
>gb|AY115567.1| Drosophila melanogaster elbow (elB) mRNA, complete cds Length = 2484 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1039 ccgccgccgctgccgctgccgc 1018
>dbj|AK096082.1| Homo sapiens cDNA FLJ38763 fis, clone KIDNE2014119 Length = 1981 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1009 ccgccgccgctgccgctgccgc 1030
>dbj|AK024361.1| Homo sapiens cDNA FLJ14299 fis, clone PLACE1010310, weakly similar to SPIDROIN 2 Length = 2174 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 265 ccgccgccgctgccgctgccgc 244
>dbj|AK001106.1| Homo sapiens cDNA FLJ10244 fis, clone HEMBB1000632, weakly similar to GUANINE NUCLEOTIDE RELEASING PROTEIN Length = 1894 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 37 ccgccgccgctgccgctgccgc 16
>gb|DQ406821.1| Mus musculus Atp2b2 mRNA, type alpha transcript, 5' UTR Length = 545 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 58 ccgccgccgctgccgctgccgc 37
>ref|NM_205990.1| Drosophila melanogaster elbow B CG4220-RC, transcript variant C (elB), mRNA Length = 3324 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1865 ccgccgccgctgccgctgccgc 1844
>ref|NM_176045.1| Drosophila melanogaster elbow B CG4220-RB, transcript variant B (elB), mRNA Length = 2457 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1072 ccgccgccgctgccgctgccgc 1051
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||||| ||||| |||||| Sbjct: 110476 ccccccaccgccgccgccgccgccgccgcc 110447
>ref|NM_078842.4| Drosophila melanogaster elbow B CG4220-RA, transcript variant A (elB), mRNA Length = 2577 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1072 ccgccgccgctgccgctgccgc 1051
>dbj|AK140435.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830008O08 product:neuron navigator 1, full insert sequence Length = 3279 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 80 cgccgccgctgccgctgccgcc 59
>dbj|AK147369.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1022L05 product:ATPase, Ca++ transporting, plasma membrane 2, full insert sequence Length = 7326 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 77 ccgccgccgctgccgctgccgc 56
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||| ||||||||||||||||||||| Sbjct: 86382 ccgctgccgctgccgctgccgccttg 86407
>ref|NM_025069.1| Homo sapiens zinc finger protein 703 (ZNF703), mRNA Length = 2174 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 265 ccgccgccgctgccgctgccgc 244
>dbj|AK147240.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1001G11 product:ATPase, Ca++ transporting, plasma membrane 2, full insert sequence Length = 6979 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 27 ccgccgccgctgccgctgccgc 6
>dbj|AK147501.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1055J24 product:ATPase, Ca++ transporting, plasma membrane 2, full insert sequence Length = 7034 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 88 ccgccgccgctgccgctgccgc 67
>ref|XM_940542.1| PREDICTED: Homo sapiens homeobox (H6 family) 3 (HMX3), mRNA Length = 2163 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1280 ccgccgccgctgccgctgccgc 1301
>ref|XM_291716.6| PREDICTED: Homo sapiens homeobox (H6 family) 3 (HMX3), mRNA Length = 2163 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 1280 ccgccgccgctgccgctgccgc 1301
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 58488 cgccgccgctgccgctgccgcc 58467
>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142364 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 acgacgacaatgacgatgatgatacc 263 |||||||| ||||||||||||||||| Sbjct: 141779 acgacgacgatgacgatgatgatacc 141754
>ref|NM_001876.2| Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 2941 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 18 ccgccgccgctgccgctgccgc 39
>gb|AC153590.7| Mus musculus 6 BAC RP23-480O11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181877 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 171579 ccgccgccgctgccgctgccgc 171600
>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR37K07, complete sequence Length = 157722 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 150364 ccgccgccgctgccgctgccgc 150385
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 29783 ccgccgccgctgccgctgccgc 29804
>dbj|AK044378.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930010C09 product:hypothetical protein, full insert sequence Length = 2619 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 480 cgccgccgctgccgctgccgcc 501
>gb|AC155720.7| Mus musculus 6 BAC RP24-151P23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 210211 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 acgacgacaatgacgatgatgatacc 263 |||||||| ||||||||||||||||| Sbjct: 29753 acgacgacgatgacgatgatgatacc 29728
>gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232002 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 37576 ccgccgccgctgccgctgccgc 37597
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 cccaccgccgccgctgccgctg 65 |||||||||||||||||||||| Sbjct: 26114043 cccaccgccgccgctgccgctg 26114064 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 7380990 cgccgccgctgccgctgccgcc 7381011 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cgtccccccaccgccgccgc 57 |||||||||||||||||||| Sbjct: 11637930 cgtccccccaccgccgccgc 11637911 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 accgccgccgctgccgctgccgcc 70 ||||||||||||||||| |||||| Sbjct: 1121986 accgccgccgctgccgcggccgcc 1122009 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ccgccgctgccgctgccgcc 70 |||||||||||||||||||| Sbjct: 536760 ccgccgctgccgctgccgcc 536779
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 1711547 cgccgccgctgccgctgccgcc 1711526 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgcc 67 |||||||||||||||||||| Sbjct: 21536292 ccgccgccgctgccgctgcc 21536311 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgcc 67 |||||||||||||||||||| Sbjct: 3219272 ccgccgccgctgccgctgcc 3219291
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||| |||||||||||||||||||| Sbjct: 22659583 ccaccaccgccgctgccgctgccgcc 22659608 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccg 68 ||||||||||||||||||||| Sbjct: 26038980 ccgccgccgctgccgctgccg 26039000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgcctt 72 ||||| ||||||||||||||||||| Sbjct: 6076054 ccgccaccgctgccgctgccgcctt 6076078 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 tcccgtccccccaccgccgccgctgccgc 63 |||| |||||||||||||||||| ||||| Sbjct: 670388 tcccctccccccaccgccgccgccgccgc 670360 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 accgccgccgctgccgctgc 66 |||||||||||||||||||| Sbjct: 24530133 accgccgccgctgccgctgc 24530152 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 accgccgccgctgccgctgc 66 |||||||||||||||||||| Sbjct: 24115322 accgccgccgctgccgctgc 24115341 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 ccccaccgccgccgctgccgctgccgcc 70 ||||||||||||||| ||||| |||||| Sbjct: 17725923 ccccaccgccgccgccgccgccgccgcc 17725896 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gccgccgctgccgctgccgc 69 |||||||||||||||||||| Sbjct: 12732643 gccgccgctgccgctgccgc 12732662
>gb|AF330231.1|AF330231 Chlamydomonas reinhardtii putative serine/threonine kinase (ACV4) gene, partial cds; and RNA stability factor MCA1 (MCA1) gene, complete cds Length = 12073 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 |||||||||||||||| ||||||||| Sbjct: 5262 ccaccgccgccgctgctgctgccgcc 5287
>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence Length = 194086 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 98 cgccgccgctgccgctgccgcc 77
>dbj|AB200236.1| Oryza sativa (japonica cultivar-group) CRLL2 mRNA for LOB domain protein, complete cds Length = 810 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 50 ccgccgccgctgccgctgccgc 29
>dbj|AK122458.1| Mus musculus mRNA for mKIAA1151 protein Length = 8557 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 343 cgccgccgctgccgctgccgcc 322
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ccccccaccgccgccgctgccgctgccgcc 70 |||||| |||||||||| |||||||||||| Sbjct: 94933 ccccccgccgccgccgccgccgctgccgcc 94904
>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence Length = 190274 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 148027 ccgccgccgctgccgctgccgc 148048
>gb|AC137579.3| Homo sapiens chromosome 8, clone RP11-346L1, complete sequence Length = 176794 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 162314 ccgccgccgctgccgctgccgc 162293
>ref|NM_012508.3| Rattus norvegicus ATPase, Ca++ transporting, plasma membrane 2 (Atp2b2), mRNA Length = 4228 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 65 ccgccgccgctgccgctgccgc 44
>ref|XM_573749.1| PREDICTED: Rattus norvegicus similar to chromosome 14 open reading frame 35 (LOC498489), mRNA Length = 4487 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 42 cccccaccgccgccgctgccgctgcc 67 ||||| |||||||||||||||||||| Sbjct: 637 cccccgccgccgccgctgccgctgcc 612
>ref|XM_222662.3| PREDICTED: Rattus norvegicus neuron navigator 1 (predicted) (Nav1_predicted), mRNA Length = 9897 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 2338 cgccgccgctgccgctgccgcc 2317
>ref|XM_345445.2| PREDICTED: Rattus norvegicus NK2 transcription factor related, locus 4 (Drosophila) (predicted) (Nkx2-4_predicted), mRNA Length = 1613 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 265 ccgccgccgctgccgctgccgc 244
>gb|AF307453.1| Mus musculus neuron navigator 1 mRNA, complete cds Length = 8841 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 465 cgccgccgctgccgctgccgcc 444
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||| |||||||||||| Sbjct: 7609 ccaccgccgccgccgccgctgccgcc 7584 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccg 68 |||||||||||||||||||| Sbjct: 9158 cgccgccgctgccgctgccg 9139
>gb|AC131935.7| Homo sapiens chromosome 11, clone RP11-756D7, complete sequence Length = 184254 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 159409 ccgccgccgctgccgctgccgc 159430
>ref|NM_175447.2| Mus musculus hypothetical protein A930010C09 (LOC215714), mRNA Length = 2619 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 480 cgccgccgctgccgctgccgcc 501
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 65330 ccgccgccgctgccgctgccgc 65309
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgccttg 73 |||||||||| ||||||||||||||| Sbjct: 118218 ccgccgccgccgccgctgccgccttg 118243
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||||||||| |||||||||||| Sbjct: 123147 ccaccgccgccgccgccgctgccgcc 123172
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 103186 ccaccgctgccgctgccgctgccgcc 103161
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 cgccgccgctgccgctgccgcc 70 |||||||||||||||||||||| Sbjct: 53747 cgccgccgctgccgctgccgcc 53726
>dbj|AK172798.1| Homo sapiens cDNA FLJ23959 fis, clone HEP14351, highly similar to Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (EC 2.3.1.21) Length = 4624 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 98 ccgccgccgctgccgctgccgc 119
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccgccgccgctgccgctgccgc 69 |||||||||||||||||||||| Sbjct: 83401 ccgccgccgctgccgctgccgc 83422
>dbj|AK120571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134F16, full insert sequence Length = 715 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ccaccgccgccgctgccgctgccgcc 70 ||||||| |||||||||||||||||| Sbjct: 144 ccaccgctgccgctgccgctgccgcc 119 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,833,309 Number of Sequences: 3902068 Number of extensions: 2833309 Number of successful extensions: 115402 Number of sequences better than 10.0: 862 Number of HSP's better than 10.0 without gapping: 916 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104272 Number of HSP's gapped (non-prelim): 10967 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)