Clone Name | bastl09f02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 117 bits (59), Expect = 2e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggagagcaaggaggtcaaggtgtcggtatggtgggacttc 247 ||||| |||||| || ||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 3183645 cagcagcagcaggaggaggaggagagcaaggcggtgaaggtgtccgtgtggtgggacttc 3183586 Query: 248 cagaagtgccagcttccgcccgacgccaacccctgccgcgtggccccgcgcgtcacggcc 307 |||| ||| | || || || || ||||||| ||||||| |||||||||||||| ||| Sbjct: 3183585 gagaactgcaacctccccaacggcgtcaaccccggccgcgtcgccccgcgcgtcaccgcc 3183526 Query: 308 gcgctgcgcgccgccggcatccg 330 ||||| ||||||||||||||||| Sbjct: 3183525 gcgctccgcgccgccggcatccg 3183503
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 117 bits (59), Expect = 2e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggagagcaaggaggtcaaggtgtcggtatggtgggacttc 247 ||||| |||||| || ||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 3183590 cagcagcagcaggaggaggaggagagcaaggcggtgaaggtgtccgtgtggtgggacttc 3183531 Query: 248 cagaagtgccagcttccgcccgacgccaacccctgccgcgtggccccgcgcgtcacggcc 307 |||| ||| | || || || || ||||||| ||||||| |||||||||||||| ||| Sbjct: 3183530 gagaactgcaacctccccaacggcgtcaaccccggccgcgtcgccccgcgcgtcaccgcc 3183471 Query: 308 gcgctgcgcgccgccggcatccg 330 ||||| ||||||||||||||||| Sbjct: 3183470 gcgctccgcgccgccggcatccg 3183448
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 90756 Score = 117 bits (59), Expect = 2e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggagagcaaggaggtcaaggtgtcggtatggtgggacttc 247 ||||| |||||| || ||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 34019 cagcagcagcaggaggaggaggagagcaaggcggtgaaggtgtccgtgtggtgggacttc 34078 Query: 248 cagaagtgccagcttccgcccgacgccaacccctgccgcgtggccccgcgcgtcacggcc 307 |||| ||| | || || || || ||||||| ||||||| |||||||||||||| ||| Sbjct: 34079 gagaactgcaacctccccaacggcgtcaaccccggccgcgtcgccccgcgcgtcaccgcc 34138 Query: 308 gcgctgcgcgccgccggcatccg 330 ||||| ||||||||||||||||| Sbjct: 34139 gcgctccgcgccgccggcatccg 34161
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 109 bits (55), Expect = 6e-21 Identities = 111/130 (85%) Strand = Plus / Plus Query: 211 gagcaaggaggtcaaggtgtcggtatggtgggacttccagaagtgccagcttccgcccga 270 ||||| || ||| ||||||||||| |||||||||||||||| ||||| || |||| | Sbjct: 80309 gagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcaggg 80368 Query: 271 cgccaacccctgccgcgtggccccgcgcgtcacggccgcgctgcgcgccgccggcatccg 330 ||||||||| |||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 80369 cgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccg 80428 Query: 331 gngccccgtc 340 |||||||| Sbjct: 80429 cggccccgtc 80438
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 109 bits (55), Expect = 6e-21 Identities = 111/130 (85%) Strand = Plus / Minus Query: 211 gagcaaggaggtcaaggtgtcggtatggtgggacttccagaagtgccagcttccgcccga 270 ||||| || ||| ||||||||||| |||||||||||||||| ||||| || |||| | Sbjct: 3234676 gagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcaggg 3234617 Query: 271 cgccaacccctgccgcgtggccccgcgcgtcacggccgcgctgcgcgccgccggcatccg 330 ||||||||| |||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 3234616 cgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccg 3234557 Query: 331 gngccccgtc 340 |||||||| Sbjct: 3234556 cggccccgtc 3234547
>dbj|AK101314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034B16, full insert sequence Length = 3119 Score = 109 bits (55), Expect = 6e-21 Identities = 111/130 (85%) Strand = Plus / Plus Query: 211 gagcaaggaggtcaaggtgtcggtatggtgggacttccagaagtgccagcttccgcccga 270 ||||| || ||| ||||||||||| |||||||||||||||| ||||| || |||| | Sbjct: 234 gagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcaggg 293 Query: 271 cgccaacccctgccgcgtggccccgcgcgtcacggccgcgctgcgcgccgccggcatccg 330 ||||||||| |||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 294 cgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccg 353 Query: 331 gngccccgtc 340 |||||||| Sbjct: 354 cggccccgtc 363
>dbj|AK071335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090O08, full insert sequence Length = 3021 Score = 109 bits (55), Expect = 6e-21 Identities = 111/130 (85%) Strand = Plus / Plus Query: 211 gagcaaggaggtcaaggtgtcggtatggtgggacttccagaagtgccagcttccgcccga 270 ||||| || ||| ||||||||||| |||||||||||||||| ||||| || |||| | Sbjct: 234 gagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcaggg 293 Query: 271 cgccaacccctgccgcgtggccccgcgcgtcacggccgcgctgcgcgccgccggcatccg 330 ||||||||| |||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 294 cgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccg 353 Query: 331 gngccccgtc 340 |||||||| Sbjct: 354 cggccccgtc 363
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 109 bits (55), Expect = 6e-21 Identities = 111/130 (85%) Strand = Plus / Minus Query: 211 gagcaaggaggtcaaggtgtcggtatggtgggacttccagaagtgccagcttccgcccga 270 ||||| || ||| ||||||||||| |||||||||||||||| ||||| || |||| | Sbjct: 3243381 gagcagggcggtgaaggtgtcggtgtggtgggacttccagagctgccacctcccgcaggg 3243322 Query: 271 cgccaacccctgccgcgtggccccgcgcgtcacggccgcgctgcgcgccgccggcatccg 330 ||||||||| |||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 3243321 cgccaacccgtgccgcgtcgccacgcgcgtcacggcggcgctgcgggacgccggcatccg 3243262 Query: 331 gngccccgtc 340 |||||||| Sbjct: 3243261 cggccccgtc 3243252
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 298 cgtcacggccgcgctgcgcgccgccggc 325 ||||| |||||||||||||||||||||| Sbjct: 91938 cgtcatggccgcgctgcgcgccgccggc 91965
>ref|XM_801133.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053420293.20) partial mRNA Length = 2187 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 cagccccagcatcagcagcagcaggag 208 ||||||||||| ||||||||||||||| Sbjct: 2163 cagccccagcagcagcagcagcaggag 2137
>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184796 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ccccatcctcgtcctccgcctcc 128 ||||||||||||||||||||||| Sbjct: 165720 ccccatcctcgtcctccgcctcc 165698
>gb|AY113378.1| Drosophila melanogaster RE02049 full insert cDNA Length = 2460 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ccccatcctcgtcctccgcctcc 128 ||||||||||||||||||||||| Sbjct: 625 ccccatcctcgtcctccgcctcc 647
>ref|NM_167210.1| Drosophila melanogaster CG32694-RC, transcript variant C (CG32694), mRNA Length = 2531 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ccccatcctcgtcctccgcctcc 128 ||||||||||||||||||||||| Sbjct: 714 ccccatcctcgtcctccgcctcc 736
>ref|NM_167209.1| Drosophila melanogaster CG32694-RA, transcript variant A (CG32694), mRNA Length = 2443 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ccccatcctcgtcctccgcctcc 128 ||||||||||||||||||||||| Sbjct: 626 ccccatcctcgtcctccgcctcc 648
>gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177820 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ccccatcctcgtcctccgcctcc 128 ||||||||||||||||||||||| Sbjct: 139039 ccccatcctcgtcctccgcctcc 139061
>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete sequence Length = 307201 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ccccatcctcgtcctccgcctcc 128 ||||||||||||||||||||||| Sbjct: 57316 ccccatcctcgtcctccgcctcc 57338
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 303 cggccgcgctgcgcgccgccggc 325 ||||||||||||||||||||||| Sbjct: 3963466 cggccgcgctgcgcgccgccggc 3963488 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gccgcgctgcgcgccgccgg 324 |||||||||||||||||||| Sbjct: 4661225 gccgcgctgcgcgccgccgg 4661206
>ref|XM_522405.1| PREDICTED: Pan troglodytes similar to anti-Mullerian hormone receptor, type II; Mullerian inhibiting substance type II receptor; anti-Mullerian hormone receptor type II (LOC467005), mRNA Length = 1854 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 cagcagcagcaggaggagagca 215 |||||||||||||||||||||| Sbjct: 117 cagcagcagcaggaggagagca 96
>gb|AY658250.1| Synthetic construct Peudomonas aeruginosa clone FLH052462.01F PA0695 gene, partial cds Length = 747 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 ggccgcgctgcgcgccgccggc 325 |||||||||||||||||||||| Sbjct: 651 ggccgcgctgcgcgccgccggc 672
>ref|XM_815357.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053508139.130) partial mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 182 cagccccagcatcagcagcagcaggaggag 211 ||||||||||| |||||||||||| ||||| Sbjct: 2151 cagccccagcagcagcagcagcagcaggag 2122
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcagg 206 ||||| |||||||||||||||||||| Sbjct: 1106863 gcagcaccagcatcagcagcagcagg 1106838
>ref|XM_795705.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC594083 (LOC594083), partial mRNA Length = 2229 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcagg 206 ||||| |||||||||||||||||||| Sbjct: 53 gcagcaccagcatcagcagcagcagg 28
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 ggccgcgctgcgcgccgccggc 325 |||||||||||||||||||||| Sbjct: 161038 ggccgcgctgcgcgccgccggc 161017
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 gctgcgcgccgccggcatccgg 331 |||||||||||||||||||||| Sbjct: 2890428 gctgcgcgccgccggcatccgg 2890449
>gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85A1-85A10, BAC clone BACR48A14, complete sequence Length = 188337 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 agcatcagcagcagcaggagga 210 |||||||||||||||||||||| Sbjct: 186843 agcatcagcagcagcaggagga 186822
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 303 cggccgcgctgcgcgccgccgg 324 |||||||||||||||||||||| Sbjct: 1437713 cggccgcgctgcgcgccgccgg 1437692
>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone BACR03F16, complete sequence Length = 204681 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 agcatcagcagcagcaggagga 210 |||||||||||||||||||||| Sbjct: 103060 agcatcagcagcagcaggagga 103039
>gb|AF350286.1|AF350286 Tetragnatha versicolor major ampullate spidroin 1 (MaSp1) gene, partial cds Length = 535 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggagg 209 |||||||||||||||||||||| Sbjct: 136 cagcatcagcagcagcaggagg 157
>gb|AF186844.1|AF186844 Xenopus laevis transcription factor Sox4 (Sox4) mRNA, complete cds Length = 1140 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 ggcagccccagcatcagcagcagcag 205 ||||||||||||| |||||||||||| Sbjct: 442 ggcagccccagcagcagcagcagcag 467
>gb|AE004505.1| Pseudomonas aeruginosa PAO1, section 66 of 529 of the complete genome Length = 11421 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 ggccgcgctgcgcgccgccggc 325 |||||||||||||||||||||| Sbjct: 5587 ggccgcgctgcgcgccgccggc 5608
>emb|Z82096.1|CEZK909 Caenorhabditis elegans Cosmid ZK909, complete sequence Length = 33782 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcag 202 |||||||||||||||||||||| Sbjct: 6078 gcagccccagcatcagcagcag 6099
>gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17 of 118 of the complete sequence Length = 216994 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 agcatcagcagcagcaggagga 210 |||||||||||||||||||||| Sbjct: 40687 agcatcagcagcagcaggagga 40708
>ref|XM_527027.1| PREDICTED: Pan troglodytes similar to Transcriptional activator protein PUR-alpha (Purine-rich single-stranded DNA-binding protein alpha) (LOC471649), mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 892 cagcaacagcagcagcaggaggaga 916
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 cgcgctgcgcgccgccggcatccgg 331 |||||||||||| |||||||||||| Sbjct: 497059 cgcgctgcgcgcagccggcatccgg 497035
>ref|NM_189469.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 450 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggagagcaa 216 |||||||||||||||||| || ||||||| Sbjct: 310 cagcatcagcagcagcagcagcagagcaa 338
>gb|BT019388.1| Homo sapiens purine-rich element binding protein A mRNA, complete cds Length = 969 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 892 cagcaacagcagcagcaggaggaga 916
>gb|BT019003.1| Zea mays clone Contig491.F mRNA sequence Length = 871 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 378 gcagccccagcaccagcagcagcag 402
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gcccgtggcgccgccgcggcg 51 ||||||||||||||||||||| Sbjct: 700328 gcccgtggcgccgccgcggcg 700348 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 acgccaacccctgccgcgtggccc 293 |||||||||||||| ||||||||| Sbjct: 2858555 acgccaacccctgcggcgtggccc 2858532
>ref|NM_005859.3| Homo sapiens purine-rich element binding protein A (PURA), mRNA Length = 2614 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 951 cagcaacagcagcagcaggaggaga 975
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 taccaagcgcttccgcgccgc 100 ||||||||||||||||||||| Sbjct: 605698 taccaagcgcttccgcgccgc 605718
>ref|NM_080791.1| Homo sapiens acid phosphatase, testicular (ACPT), transcript variant A3, mRNA Length = 1068 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagcagcaggag 208 |||||| |||||| ||||||||||||||| Sbjct: 68 ggcagcaccagcagcagcagcagcaggag 40
>ref|NM_080790.1| Homo sapiens acid phosphatase, testicular (ACPT), transcript variant A2, mRNA Length = 1282 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagcagcaggag 208 |||||| |||||| ||||||||||||||| Sbjct: 68 ggcagcaccagcagcagcagcagcaggag 40
>ref|NM_080789.1| Homo sapiens acid phosphatase, testicular (ACPT), transcript variant A1, mRNA Length = 1415 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagcagcaggag 208 |||||| |||||| ||||||||||||||| Sbjct: 68 ggcagcaccagcagcagcagcagcaggag 40
>ref|NM_033068.2| Homo sapiens acid phosphatase, testicular (ACPT), transcript variant A, mRNA Length = 1347 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagcagcaggag 208 |||||| |||||| ||||||||||||||| Sbjct: 68 ggcagcaccagcagcagcagcagcaggag 40
>gb|AF282406.1| Ovis aries DNA binding protein pur-alpha mRNA, complete cds Length = 1113 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 906 cagcagcagcagcagcaggaggaga 930
>gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, complete sequence Length = 199669 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 catcagcagcagcaggaggag 211 ||||||||||||||||||||| Sbjct: 193174 catcagcagcagcaggaggag 193154
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 ||||| ||||||||||||||||||| Sbjct: 151132 gcagcaccagcatcagcagcagcag 151156
>gb|AC126245.3| Mus musculus BAC clone RP24-354D8 from chromosome 17, complete sequence Length = 160440 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cagcagcagcaggaggagagc 214 ||||||||||||||||||||| Sbjct: 109468 cagcagcagcaggaggagagc 109488
>ref|XM_533770.2| PREDICTED: Canis familiaris similar to Membrane associated guanylate kinase, WW and PDZ domain containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane associated guanylate kinase inverted-1) (MAGI-1) (Atrophin-1 interacting protein 3) (AIP3) (WW domain-containing p... (LOC476565), mRNA Length = 4782 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 1626 gcagccccagcagcagcagcagcag 1650
>emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, complete sequence Length = 122592 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 95396 cagcatcagcagcagcaggag 95376
>gb|AC098712.3| Mus musculus BAC clone RP23-2A21 from 10, complete sequence Length = 205054 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 catcagcagcagcaggaggag 211 ||||||||||||||||||||| Sbjct: 121845 catcagcagcagcaggaggag 121825
>ref|XM_860591.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1 (Activator protein 1) (AP1) (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A) (AH119), transcript variant 4 (LOC609429), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 1184 gcagccccagcagcagcagcagcag 1208
>ref|XM_860558.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1 (Activator protein 1) (AP1) (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A) (AH119), transcript variant 2 (LOC609429), mRNA Length = 1672 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 1217 gcagccccagcagcagcagcagcag 1241
>ref|XM_544287.2| PREDICTED: Canis familiaris similar to Transcriptional activator protein PUR-alpha (Purine-rich single-stranded DNA-binding protein alpha) (LOC487159), mRNA Length = 2906 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 1138 cagcagcagcagcagcaggaggaga 1162
>gb|AY358443.1| Homo sapiens clone DNA73760 GalNAc-transferase H (UNQ770) mRNA, complete cds Length = 2575 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 532 cccagcatcaggagcagcaggagga 508
>gb|BC110574.1| Homo sapiens purine-rich element binding protein A, mRNA (cDNA clone IMAGE:40004320), partial cds Length = 909 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 781 cagcaacagcagcagcaggaggaga 805
>emb|AL031591.19|HS353E16 Human DNA sequence from clone RP3-353E16 on chromosome 22q11.22-12.3, complete sequence Length = 189765 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 28350 gcagccccagcagcagcagcagcag 28326
>emb|Z38016.1|CEUNC51MR C.elegans unc-51 mRNA for serine/threonine kinase Length = 2915 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 1378 cagcatcagcagcagcaggag 1398
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 gctcgcacgctggcggcggcgagcg 171 |||||||||||||||| |||||||| Sbjct: 2854930 gctcgcacgctggcggtggcgagcg 2854954
>gb|BC036087.1| Homo sapiens purine-rich element binding protein A, mRNA (cDNA clone MGC:33782 IMAGE:5284976), complete cds Length = 2582 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 904 cagcaacagcagcagcaggaggaga 928
>gb|BC014789.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2, mRNA (cDNA clone MGC:17334 IMAGE:4212702), complete cds Length = 3528 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 496 cccagcatcaggagcagcaggagga 472
>emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene, the Otx1 gene for orthodenticle homolog 1, the 3' end of a novel gene and two CpG islands, complete sequence Length = 240514 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagc 200 ||||||||||||||||||||| Sbjct: 96296 ggcagccccagcatcagcagc 96276
>emb|AJ720208.1| Gallus gallus mRNA for hypothetical protein, clone 12l23 Length = 2200 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 ||||||||||| ||||||||||||| Sbjct: 106 gcagccccagcctcagcagcagcag 82
>ref|NM_001006143.1| Gallus gallus ER degradation enhancer, mannosidase alpha-like 1 (EDEM1), mRNA Length = 2200 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 ||||||||||| ||||||||||||| Sbjct: 106 gcagccccagcctcagcagcagcag 82
>emb|BX640522.13| Zebrafish DNA sequence from clone CH211-257O19 in linkage group 15, complete sequence Length = 154564 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 26053 cagcagcagcagcagcaggaggaga 26077
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 ||||| ||||||||||||||||||| Sbjct: 14389 gcagcaccagcatcagcagcagcag 14413
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 ||||| ||||||||||||||||||| Sbjct: 112436 gcagcaccagcatcagcagcagcag 112460
>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence Length = 166439 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagcagcaggag 208 |||||| |||||| ||||||||||||||| Sbjct: 123147 ggcagcaccagcagcagcagcagcaggag 123119
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 470569 cagcagcagcagcagcaggaggaga 470593
>ref|NM_136028.2| Drosophila melanogaster CG7180-RA (CG7180), mRNA Length = 3417 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 260 cagcatcagcagcagcaggag 280
>gb|AY095518.1| Drosophila melanogaster GH22607 full insert cDNA Length = 2588 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 1110 cagcatcagcagcagcaggag 1130
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA Length = 2288 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 ||||| ||||||||||||||||||| Sbjct: 1632 gcagcaccagcatcagcagcagcag 1656
>gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, complete sequence Length = 118504 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 8632 cagcaacagcagcagcaggaggaga 8608
>ref|NM_054110.2| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 (GALNTL2), mRNA Length = 3580 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 574 cccagcatcaggagcagcaggagga 550
>gb|AY071625.1| Drosophila melanogaster RE67475 full length cDNA Length = 3430 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 260 cagcatcagcagcagcaggag 280
>ref|XM_690266.1| PREDICTED: Danio rerio similar to LOC494751 protein (LOC566982), mRNA Length = 4602 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 952 cagcagcagcagcagcaggaggaga 928
>gb|AY035399.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GALNT7) mRNA, complete cds Length = 3357 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 354 cccagcatcaggagcagcaggagga 330
>gb|AC093048.1| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39D12, complete sequence Length = 184021 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 121781 cagcatcagcagcagcaggag 121761
>gb|AF321918.1|AF321918 Homo sapiens testicular acid phosphatase (ACPT) gene, complete cds, alternatively spliced products Length = 6127 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 ggcagccccagcatcagcagcagcaggag 208 |||||| |||||| ||||||||||||||| Sbjct: 1390 ggcagcaccagcagcagcagcagcaggag 1362
>gb|AC000105.41| Homo sapiens Chromosome 22q11.2 MDR Region, complete sequence Length = 90223 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 52205 gcagccccagcagcagcagcagcag 52181
>gb|AC004032.7| Homo sapiens Chromosome 22q11.2 BAC Clone b437g10 In BCRL2-GGT Region, complete sequence Length = 200685 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 142317 gcagccccagcagcagcagcagcag 142293
>ref|NM_068171.1| Caenorhabditis elegans R08C7.11 (R08C7.11) mRNA, complete cds Length = 165 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 86 gcagccccagcagcagcagcagcag 62
>ref|NM_075468.3| Caenorhabditis elegans UNCoordinated family member (unc-51) (unc-51) mRNA, complete cds Length = 2887 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 1358 cagcatcagcagcagcaggag 1378
>ref|NG_004709.1| Mus musculus histocompatibility 2, M region locus 7, pseudogene (H2-M7-ps) on chromosome 17 Length = 2687 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cagcagcagcaggaggagagc 214 ||||||||||||||||||||| Sbjct: 288 cagcagcagcaggaggagagc 268
>gb|AC091501.1|AC091501 Drosophila melanogaster, chromosome 2R, region 53D-53E, BAC clone BACR36P23, complete sequence Length = 198390 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 138385 cagcatcagcagcagcaggag 138365
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 |||||||||||| |||||||||||| Sbjct: 20649828 cagcatcagcaggagcaggaggaga 20649852 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 10435858 atcagcagcagcaggaggag 10435839 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1502939 cagcagcagcagcagcaggaggag 1502962
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 ggcggcgagcggtggagggggcagc 185 ||||| ||||||||||||||||||| Sbjct: 8054403 ggcggtgagcggtggagggggcagc 8054379
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggagagcaa 216 |||||||||||||||||| || ||||||| Sbjct: 42910637 cagcatcagcagcagcagcagcagagcaa 42910609 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggcgccgccgcggcgaggag 56 |||||||||||||||||||| Sbjct: 42730226 ggcgccgccgcggcgaggag 42730207 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcggcggcgagcggtggag 177 |||||||||||||||||||| Sbjct: 40190861 ggcggcggcgagcggtggag 40190842 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 21989695 cagcagcagcagcagcaggaggag 21989718 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 17577499 cagcagcagcagcagcaggaggag 17577522 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 11363324 cagcagcagcagcagcaggaggag 11363301 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 catcagcagcagcaggagga 210 |||||||||||||||||||| Sbjct: 8056794 catcagcagcagcaggagga 8056775
>ref|XM_392304.2| PREDICTED: Apis mellifera similar to CG31803-PA (LOC408772), mRNA Length = 2418 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 agcagcagcaggaggagagca 215 ||||||||||||||||||||| Sbjct: 1559 agcagcagcaggaggagagca 1579
>gb|AF532117.1| Mus musculus strain 129/SvJ BAC clone citb9k22 from the MHC region, complete sequence Length = 173288 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cagcagcagcaggaggagagc 214 ||||||||||||||||||||| Sbjct: 88941 cagcagcagcaggaggagagc 88961
>gb|AC090645.1|AC090645 Homo sapiens chromosome 3 clone RP11-556G18 map 3p, complete sequence Length = 162869 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 27454 gcagccccagcagcagcagcagcag 27478
>gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, complete sequence Length = 198253 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gggggcagccccagcatcagc 197 ||||||||||||||||||||| Sbjct: 161875 gggggcagccccagcatcagc 161855
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggagagcaa 216 |||||||||||||||||| || ||||||| Sbjct: 11516 cagcatcagcagcagcagcagcagagcaa 11488
>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence Length = 7479 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 2617 gcagccccagcagcagcagcagcag 2593
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggagagcaa 216 |||||||||||||||||| || ||||||| Sbjct: 104371 cagcatcagcagcagcagcagcagagcaa 104343
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cacggccgcgctgcgcgccgc 321 ||||||||||||||||||||| Sbjct: 6857190 cacggccgcgctgcgcgccgc 6857170
>ref|NM_001009447.1| Ovis aries purine-rich element binding protein A (PURA), mRNA Length = 1113 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 906 cagcagcagcagcagcaggaggaga 930
>gb|AC011379.7| Homo sapiens chromosome 5 clone CTB-131B5, complete sequence Length = 170797 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 92063 cagcaacagcagcagcaggaggaga 92039
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 ggccgcgctgcgcgccgccgg 324 ||||||||||||||||||||| Sbjct: 3419516 ggccgcgctgcgcgccgccgg 3419536
>gb|AC090953.2| Homo sapiens chromosome 3 clone RP11-608O8 map 3p, complete sequence Length = 189961 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 51261 cccagcatcaggagcagcaggagga 51237
>gb|AC087858.2| Homo sapiens chromosome 3 clone RP11-207E20 map 3p, complete sequence Length = 179723 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 149308 cccagcatcaggagcagcaggagga 149284
>gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, complete sequence Length = 217521 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gggggcagccccagcatcagc 197 ||||||||||||||||||||| Sbjct: 77566 gggggcagccccagcatcagc 77546 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 cagcaggaggagagcaaggaggtc 223 |||||| ||||||||||||||||| Sbjct: 98194 cagcagcaggagagcaaggaggtc 98217
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 ggcggcgagcggtggagggggcagc 185 ||||| ||||||||||||||||||| Sbjct: 42596 ggcggtgagcggtggagggggcagc 42572
>dbj|AB078149.1| Homo sapiens GALNT17 mRNA for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 17, complete cds Length = 1920 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 71 cccagcatcaggagcagcaggagga 47
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 |||||||||||| |||||||||||| Sbjct: 124200 cagcatcagcaggagcaggaggaga 124224
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 |||||||||||| |||||||||||| Sbjct: 22281 cagcatcagcaggagcaggaggaga 22305
>ref|XM_316571.2| Anopheles gambiae str. PEST ENSANGP00000010974 (ENSANGG00000023991), partial mRNA Length = 690 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||| |||||||||||||||||| Sbjct: 135 gcagccgcagcatcagcagcagcag 159
>dbj|AK110094.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H01, full insert sequence Length = 3138 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 cagccccagcatcagcagcagcagg 206 ||||||||||| ||||||||||||| Sbjct: 1834 cagccccagcagcagcagcagcagg 1858
>gb|U61953.2| Caenorhabditis elegans cosmid R08C7, complete sequence Length = 39012 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 33790 gcagccccagcagcagcagcagcag 33814
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gctgcgcgccgccggcatccg 330 ||||||||||||||||||||| Sbjct: 1952513 gctgcgcgccgccggcatccg 1952493
>gb|AC154819.2| Mus musculus BAC clone RP24-535A1 from 17, complete sequence Length = 165136 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cagcagcagcaggaggagagc 214 ||||||||||||||||||||| Sbjct: 49913 cagcagcagcaggaggagagc 49933
>gb|AY106570.1| Zea mays PCO096184 mRNA sequence Length = 1228 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 367 cagcagcagcagcagcaggaggaga 391
>gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67 of 83 of the complete sequence Length = 262745 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 29699 cagcatcagcagcagcaggag 29679
>gb|AE003806.3| Drosophila melanogaster chromosome 2R, section 44 of 73 of the complete sequence Length = 271179 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 233929 cagcatcagcagcagcaggag 233909
>gb|AC006471.1|AC006471 Drosophila melanogaster, chromosome 2L, region 36D2-36E2, P1 clones DS00554 and DS04489, complete sequence Length = 134019 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 80769 cagcatcagcagcagcaggag 80789
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagcagcag 205 ||||| ||||||||||||||||||| Sbjct: 130310 gcagcaccagcatcagcagcagcag 130286
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 cggccgcgctgcgcgccgccg 323 ||||||||||||||||||||| Sbjct: 14271 cggccgcgctgcgcgccgccg 14291
>ref|NM_002430.2| Homo sapiens meningioma (disrupted in balanced translocation) 1 (MN1), mRNA Length = 7569 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 1858 gcagccccagcagcagcagcagcag 1882
>emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, complete sequence Length = 120606 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagcag 205 |||||||||||| |||||||||||| Sbjct: 55500 gcagccccagcagcagcagcagcag 55524
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gccgcgctgcgcgccgccggc 325 ||||||||||||||||||||| Sbjct: 1701794 gccgcgctgcgcgccgccggc 1701814 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 cgctgcgcgccgccggcatc 328 |||||||||||||||||||| Sbjct: 551871 cgctgcgcgccgccggcatc 551852
>emb|AL832575.2|HSM803884 Homo sapiens mRNA; cDNA DKFZp451D2416 (from clone DKFZp451D2416) Length = 5703 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 51 cccagcatcaggagcagcaggagga 27
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 155918 cagcagcagcagcagcaggaggaga 155894
>emb|AL832736.1|HSM804047 Homo sapiens mRNA; cDNA DKFZp686H1113 (from clone DKFZp686H1113) Length = 2430 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 516 cccagcatcaggagcagcaggagga 492
>gb|AC004289.1|AC004289 Drosophila melanogaster DNA sequence (P1 DS03646 (D170)), complete sequence Length = 81625 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggag 208 ||||||||||||||||||||| Sbjct: 32870 cagcatcagcagcagcaggag 32850
>gb|M96684.1|HUMPURA H.sapiens Pur (pur-alpha) mRNA, complete cds Length = 1144 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggaga 212 ||||| ||||||||||||||||||| Sbjct: 951 cagcaacagcagcagcaggaggaga 975
>emb|AL928578.6| Mouse DNA sequence from clone RP23-33L19 on chromosome 2, complete sequence Length = 190906 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 ccagcatcagcagcagcaggaggag 211 |||||| |||||||||||||||||| Sbjct: 81756 ccagcagcagcagcagcaggaggag 81780
>emb|AL731871.12| Mouse DNA sequence from clone RP23-111J19 on chromosome 2, complete sequence Length = 195003 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 ccagcatcagcagcagcaggaggag 211 |||||| |||||||||||||||||| Sbjct: 57307 ccagcagcagcagcagcaggaggag 57331
>emb|AL831925.1|HSM803261 Homo sapiens mRNA; cDNA DKFZp313I2220 (from clone DKFZp313I2220); complete cds Length = 3580 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cccagcatcagcagcagcaggagga 210 ||||||||||| ||||||||||||| Sbjct: 574 cccagcatcaggagcagcaggagga 550
>gb|L14276.1|MUSMHH2M7X Mouse MHC class I H2-M7 gene, exons 1-5 Length = 2687 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cagcagcagcaggaggagagc 214 ||||||||||||||||||||| Sbjct: 288 cagcagcagcaggaggagagc 268
>gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete sequence Length = 203498 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 126391 cagcagcagcagcagcaggaggag 126368
>ref|NM_001527.1| Homo sapiens histone deacetylase 2 (HDAC2), mRNA Length = 1985 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 150 cagcagcagcagcagcaggaggag 173
>gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosome 7, complete sequence Length = 163916 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 51942 cagcagcagcagcagcaggaggag 51965 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 51855 cagcagcagcagcagcaggaggag 51878
>gb|AC123629.10| Mus musculus chromosome 13, clone RP24-344N4, complete sequence Length = 177594 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 133621 cagcagcagcagcagcaggaggag 133644
>ref|XM_637195.1| Dictyostelium discoideum transcription factor IIIC-gamma subunit (DDB0231090), partial mRNA Length = 2994 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1862 cagcagcagcagcagcaggaggag 1885
>ref|XM_479891.1| Oryza sativa (japonica cultivar-group), mRNA Length = 285 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 57 cagcagcagcagcagcaggaggag 80
>ref|XM_475136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1587 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 314 atcagcagcagcaggaggag 333
>ref|NM_187654.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 94 cagcagcagcagcagcaggaggag 117
>ref|XM_468563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggagagca 215 ||||| |||||||||||| ||||||||| Sbjct: 7 cagcagcagcagcagcagcaggagagca 34
>ref|XM_450939.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1555 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cctccgcctccgggggcttc 137 |||||||||||||||||||| Sbjct: 52 cctccgcctccgggggcttc 71
>ref|XM_518700.1| PREDICTED: Pan troglodytes similar to transcriptional regulator homolog RPD3 (LOC462950), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 225 cagcagcagcagcagcaggaggag 248
>ref|NM_196526.1| Oryza sativa (japonica cultivar-group) putative submergence induced protein 2 (OSJNBa0006I13.13), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 60 cagcaacagcagcagcaggaggag 37
>ref|XM_526508.1| PREDICTED: Pan troglodytes similar to HGF activator preproprotein (LOC471126), mRNA Length = 3489 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 330 cagcagcagcagcagcaggaggag 307
>ref|XM_463272.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 142 cagcagcagcagcagcaggaggag 165
>ref|NM_185574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1527 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 agcatcagcagcagcaggaggaga 212 |||| ||||||||||||||||||| Sbjct: 398 agcagcagcagcagcaggaggaga 421
>ref|XM_472904.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2676 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tcctcgtcctccgcctccgg 130 |||||||||||||||||||| Sbjct: 1809 tcctcgtcctccgcctccgg 1828
>ref|NM_189304.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 732 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 88 cagcagcagcagcagcaggaggag 111
>gb|AC115047.19| Mus musculus chromosome 10, clone RP24-330D16, complete sequence Length = 193923 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 65910 cagcagcagcagcagcaggaggag 65933
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 135770 cagcagcagcagcagcaggaggag 135793
>gb|BC106088.1| Mus musculus cDNA clone IMAGE:30845558 Length = 1281 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 83 atcagcagcagcaggaggag 64
>gb|AC158918.7| Mus musculus chromosome 15, clone RP23-106N12, complete sequence Length = 209747 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 31964 atcagcagcagcaggaggag 31945
>gb|AY022753.1| Oryza sativa microsatellite MRG5078 containing (CCT)X8, closest to marker S1780, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 136 atcagcagcagcaggaggag 117
>gb|AY022732.1| Oryza sativa microsatellite MRG5057 containing (CCT)X8, closest to marker RM131, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 140 cagcagcagcagcagcaggaggag 117
>gb|AY022639.1| Oryza sativa microsatellite MRG4964 containing (CAG)X10, closest to marker C585, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 113 cagcagcagcagcagcaggaggag 136
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gctgcccgtggcgccgccgc 47 |||||||||||||||||||| Sbjct: 576124 gctgcccgtggcgccgccgc 576143
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 5361 cagcagcagcagcagcaggaggag 5384
>gb|AC079606.6| Trypanosoma brucei chromosome 2 clone RPCI93-3B10, complete sequence Length = 160845 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 58202 cagcagcagcagcagcaggaggag 58225
>gb|AC073246.5| Trypanosoma brucei chromosome 2 clone RPCI93-25N24, complete sequence Length = 113329 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 57035 cagcagcagcagcagcaggaggag 57012
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 198481 cagcagcagcagcagcaggaggag 198504 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 58202 cagcagcagcagcagcaggaggag 58225
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 195347 cagcagcagcagcagcaggaggag 195370
>gb|DQ145254.1| Drosophila miranda neo-X psq gene, partial sequence Length = 1184 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccagcatcagcagcagcag 205 |||||||||||||||||||| Sbjct: 110 cccagcatcagcagcagcag 129
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ggccgcgctgcgcgccgccg 323 |||||||||||||||||||| Sbjct: 1573496 ggccgcgctgcgcgccgccg 1573477
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 cagccccagcatcagcagcagcag 205 ||||||||||| |||||||||||| Sbjct: 42102 cagccccagcagcagcagcagcag 42079
>gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, complete sequence Length = 232751 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 60790 cagcagcagcagcagcaggaggag 60813
>gb|AC133583.13| Mus musculus chromosome 12, clone RP24-444A9, complete sequence Length = 123042 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 96800 cagcagcagcagcagcaggaggag 96823
>ref|XM_589346.2| PREDICTED: Bos taurus similar to ADP-ribosylation factor 5, transcript variant 1 (LOC511918), mRNA Length = 1062 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 34 cagcagcagcagcagcaggaggag 11
>ref|XM_597941.2| PREDICTED: Bos taurus similar to C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6) (CCR-6) (LARC receptor) (GPR-CY4) (GPRCY4) (Chemokine receptor-like 3) (CKR-L3) (DRY6) (LOC519716), mRNA Length = 1113 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gcagccccagcatcagcagc 200 |||||||||||||||||||| Sbjct: 637 gcagccccagcatcagcagc 618
>ref|XM_362244.1| Magnaporthe grisea 70-15 hypothetical protein (MG04689.4) partial cds Length = 1194 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 cagccccagcatcagcagcagcag 205 ||||||||||| |||||||||||| Sbjct: 972 cagccccagcagcagcagcagcag 995
>ref|XM_362882.1| Magnaporthe grisea 70-15 hypothetical protein (MG08555.4) partial cds Length = 1785 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagca 204 |||||||||||| ||||||||||| Sbjct: 1002 gcagccccagcagcagcagcagca 1025
>ref|XM_871040.1| PREDICTED: Bos taurus hypothetical protein LOC618716 (LOC618716), mRNA Length = 1289 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ccagcatcagcagcagcagg 206 |||||||||||||||||||| Sbjct: 106 ccagcatcagcagcagcagg 87
>ref|XM_870493.1| PREDICTED: Bos taurus similar to Putative G-protein coupled receptor 43 (LOC618169), mRNA Length = 942 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 189 cagcagcagcagcagcaggaggag 166
>gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, complete sequence Length = 158075 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 42235 cagcagcagcagcagcaggaggag 42212
>gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome 18, complete sequence Length = 238060 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 139046 atcagcagcagcaggaggag 139027
>gb|AY236481.1| Chlamydomonas reinhardtii REX1-S and REX1-B (REX1) bicistronic gene, complete cds Length = 4158 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 2681 cagcagcagcagcagcaggaggag 2704
>ref|XM_956724.1| Neurospora crassa OR74A hypothetical protein (NCU06629.1) partial mRNA Length = 1410 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1124 cagcagcagcagcagcaggaggag 1147
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 112389 cagcagcagcagcagcaggaggag 112412
>ref|XM_958031.1| Neurospora crassa OR74A hypothetical protein (NCU07863.1) partial mRNA Length = 6570 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagca 204 ||||| |||||||||||||||||| Sbjct: 5775 gcagcaccagcatcagcagcagca 5798
>ref|XM_959073.1| Neurospora crassa OR74A hypothetical protein (NCU03073.1) partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 248 cagcagcagcagcagcaggaggag 271
>ref|XM_959485.1| Neurospora crassa OR74A hypothetical protein (NCU03172.1) partial mRNA Length = 1743 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1249 cagcagcagcagcagcaggaggag 1226
>ref|XM_326483.1| Neurospora crassa OR74A hypothetical protein (NCU06629.1) partial mRNA Length = 1410 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1124 cagcagcagcagcagcaggaggag 1147
>ref|XM_328568.1| Neurospora crassa OR74A hypothetical protein (NCU07863.1) partial mRNA Length = 6570 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagca 204 ||||| |||||||||||||||||| Sbjct: 5775 gcagcaccagcatcagcagcagca 5798
>ref|XM_330508.1| Neurospora crassa OR74A hypothetical protein (NCU03073.1) partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 248 cagcagcagcagcagcaggaggag 271
>ref|XM_330607.1| Neurospora crassa OR74A hypothetical protein (NCU03172.1) partial mRNA Length = 1743 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1249 cagcagcagcagcagcaggaggag 1226
>ref|XM_874333.1| PREDICTED: Bos taurus v-jun avian sarcoma virus 17 oncogene homolog, transcript variant 3 (JUN), mRNA Length = 2541 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagca 204 |||||||||||| ||||||||||| Sbjct: 852 gcagccccagcagcagcagcagca 875
>ref|XM_593122.2| PREDICTED: Bos taurus v-jun avian sarcoma virus 17 oncogene homolog, transcript variant 1 (JUN), mRNA Length = 2611 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagca 204 |||||||||||| ||||||||||| Sbjct: 922 gcagccccagcagcagcagcagca 945
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 7587 cagcagcagcagcagcaggaggag 7610
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgtcacggccgcgctgcgcg 317 |||||||||||||||||||| Sbjct: 290355 cgtcacggccgcgctgcgcg 290336
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ggccgcgctgcgcgccgccg 323 |||||||||||||||||||| Sbjct: 2810297 ggccgcgctgcgcgccgccg 2810278
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 135620 cagcagcagcagcagcaggaggag 135643
>gb|AC147160.2| Mus musculus BAC clone RP24-336A22 from chromosome 15, complete sequence Length = 205374 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 203244 atcagcagcagcaggaggag 203225
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 144148 atcagcagcagcaggaggag 144129
>gb|AC101760.9| Mus musculus chromosome 1, clone RP24-196A8, complete sequence Length = 163195 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 152019 cagcagcagcagcagcaggaggag 151996
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 cgctgcgcgccgccggcatc 328 |||||||||||||||||||| Sbjct: 86622 cgctgcgcgccgccggcatc 86603
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cagccccagcatcagcagca 201 |||||||||||||||||||| Sbjct: 2138576 cagccccagcatcagcagca 2138595
>ref|XM_652545.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0033.2), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 206 cagcagcagcagcagcaggaggag 229
>gb|AC101822.24| Mus musculus chromosome 1, clone RP24-393F8, complete sequence Length = 125941 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ggcagccccagcatcagcagcagc 203 |||||||||||| ||||||||||| Sbjct: 44629 ggcagccccagcctcagcagcagc 44652
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggagagca 215 ||||| |||||||||||| ||||||||| Sbjct: 516048 cagcagcagcagcagcagcaggagagca 516075 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 463711 cagcagcagcagcagcaggaggag 463734
>ref|XM_888675.2| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like), transcript variant 2 (Arid1b), mRNA Length = 11205 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 911 cagcagcagcagcagcaggaggag 934
>ref|XM_139711.8| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like), transcript variant 1 (Arid1b), mRNA Length = 11325 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 911 cagcagcagcagcagcaggaggag 934
>ref|XM_973595.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like) (Arid1b), mRNA Length = 11836 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1382 cagcagcagcagcagcaggaggag 1405
>ref|XM_001000508.1| PREDICTED: Mus musculus peptidase inhibitor 16 (Pi16), mRNA Length = 1999 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 489 atcagcagcagcaggaggag 470
>ref|XM_983766.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like) (Arid1b), mRNA Length = 11501 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1048 cagcagcagcagcagcaggaggag 1071
>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence Length = 202151 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 140168 cagcagcagcagcagcaggaggag 140145
>gb|AY504949.1| Bos taurus histone deacetylase 2 (HDAC2) mRNA, partial cds Length = 253 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 1 cagcagcagcagcagcaggaggag 24
>gb|AC006976.2| Homo sapiens PAC clone RP5-1047E14 from 7, complete sequence Length = 121492 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcagcagcagcaggaggaga 212 |||||||||||||||||||| Sbjct: 79532 tcagcagcagcaggaggaga 79513
>gb|AC002452.1| Homo sapiens BAC clone GS1-310A5 from 7, complete sequence Length = 177112 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 122194 cagcagcagcagcagcaggaggag 122217
>gb|AY502076.1| Rhodococcus sp. DK17 plasmid pDK3, partial sequence Length = 104578 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cggccgcgctgcgcgccgcc 322 |||||||||||||||||||| Sbjct: 74182 cggccgcgctgcgcgccgcc 74163
>ref|XM_841296.1| Trypanosoma brucei TREU927 retrotransposon hot spot protein, RHS1c (Tb927.1.180) partial mRNA Length = 2502 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 139 cagcagcagcagcagcaggaggag 116
>ref|XM_841299.1| Trypanosoma brucei TREU927 retrotransposon hot spot protein, RHS1b (Tb927.1.220) partial mRNA Length = 2502 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 139 cagcagcagcagcagcaggaggag 116
>ref|XM_946387.1| Trypanosoma brucei TREU927 retrotransposon hot spot (RHS) protein (Tb927.2.370) partial mRNA Length = 2505 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 139 cagcagcagcagcagcaggaggag 116
>emb|X82209.2|HSMN1 Homo sapiens mRNA for MN1 protein Length = 7568 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagccccagcatcagcagcagca 204 |||||||||||| ||||||||||| Sbjct: 1859 gcagccccagcagcagcagcagca 1882
>ref|XM_850531.1| PREDICTED: Canis familiaris MHC class Ib (DLA-79), mRNA Length = 1146 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 48 cagcagcagcagcagcaggaggag 25
>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and 01G10 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 447895 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agcgcttccgcgccgcggaggccc 108 |||||||||||||| ||||||||| Sbjct: 27511 agcgcttccgcgccccggaggccc 27488
>gb|AY444343.1| Hypocrea jecorina strain QM 9414 glucose transporter (hxt1) gene, complete cds Length = 6750 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 3563 cagcagcagcagcagcaggaggag 3586
>ref|XM_538912.2| PREDICTED: Canis familiaris similar to triggering receptor expressed on myeloid cells-like 2 (LOC481791), mRNA Length = 1314 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 183 agccccagcatcagcagcagcaggagga 210 |||| ||||| ||||||||||||||||| Sbjct: 371 agccacagcagcagcagcagcaggagga 344
>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 132778 cagcagcagcagcagcaggaggag 132801
>gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosome 18, complete sequence Length = 158065 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 146984 atcagcagcagcaggaggag 147003
>ref|XM_799791.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053505363.10) partial mRNA Length = 2199 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 cagccccagcatcagcagcagcag 205 ||||||||||| |||||||||||| Sbjct: 2169 cagccccagcagcagcagcagcag 2146
>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete sequence Length = 86190 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 cagccccagcatcagcagcagcag 205 ||||||||||| |||||||||||| Sbjct: 42616 cagccccagcagcagcagcagcag 42593
>ref|XM_803151.1| Trypanosoma cruzi strain CL Brener kinesin (Tc00.1047053508917.30) partial mRNA Length = 2769 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 2674 cagcagcagcagcagcaggaggag 2697
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 catcagcagcagcaggagga 210 |||||||||||||||||||| Sbjct: 20907 catcagcagcagcaggagga 20888
>gb|BC013141.1| Homo sapiens histone deacetylase 2, mRNA (cDNA clone IMAGE:4475960), with apparent retained intron Length = 1627 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 210 cagcagcagcagcagcaggaggag 233
>ref|XM_809119.1| Trypanosoma cruzi strain CL Brener inositol polyphosphate kinase-like protein (Tc00.1047053504213.90) partial mRNA Length = 2199 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 46 cagcagcagcagcagcaggaggag 69
>gb|AC125133.2| Mus musculus BAC clone RP24-316A22 from chromosome 18, complete sequence Length = 175583 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 112938 cagcagcagcagcagcaggaggag 112961
>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete sequence Length = 168712 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 28551 cagcagcagcagcagcaggaggag 28574
>gb|AC127281.3| Mus musculus BAC clone RP24-273C15 from chromosome 13, complete sequence Length = 154576 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 141857 cagcagcagcagcagcaggaggag 141880
>gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome 1, complete sequence Length = 178821 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 170686 cagcagcagcagcagcaggaggag 170709
>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence Length = 197197 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 agcatcagcagcagcaggaggaga 212 |||| ||||||||||||||||||| Sbjct: 117080 agcagcagcagcagcaggaggaga 117057
>ref|XM_797487.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053507133.10) partial mRNA Length = 335 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 cagccccagcatcagcagcagcag 205 ||||||||||| |||||||||||| Sbjct: 305 cagccccagcagcagcagcagcag 282
>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete sequence Length = 176646 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ccagccagccaccgcccccagctg 28 |||||||||||| ||||||||||| Sbjct: 101971 ccagccagccacagcccccagctg 101948
>emb|CR734188.2|CNS0GTA3 Tetraodon nigroviridis full-length cDNA Length = 1278 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 919 cagcagcagcagcagcaggaggag 942
>emb|CR733745.2|CNS0GSXS Tetraodon nigroviridis full-length cDNA Length = 1338 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 947 cagcagcagcagcagcaggaggag 970
>emb|CR732076.2|CNS0GRTD Tetraodon nigroviridis full-length cDNA Length = 1324 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 932 cagcagcagcagcagcaggaggag 955
>emb|CR731427.2|CNS0GRBC Tetraodon nigroviridis full-length cDNA Length = 1327 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 933 cagcagcagcagcagcaggaggag 956
>emb|CR730722.2|CNS0GQRR Tetraodon nigroviridis full-length cDNA Length = 1271 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 917 cagcagcagcagcagcaggaggag 940
>emb|CR726580.2|CNS0GNKQ Tetraodon nigroviridis full-length cDNA Length = 1345 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 953 cagcagcagcagcagcaggaggag 976
>emb|CR725682.2|CNS0GMVS Tetraodon nigroviridis full-length cDNA Length = 1267 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 870 cagcagcagcagcagcaggaggag 893
>ref|XM_546992.2| PREDICTED: Canis familiaris similar to Zinc finger protein 500 (LOC489874), mRNA Length = 2094 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 448 cagcagcagcagcagcaggaggag 471
>ref|XM_546951.2| PREDICTED: Canis familiaris similar to PERQ amino acid rich, with GYF domain 1, transcript variant 1 (LOC489833), mRNA Length = 3102 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 2113 cagcaacagcagcagcaggaggag 2136
>ref|XM_853859.1| PREDICTED: Canis familiaris similar to PERQ amino acid rich, with GYF domain 1, transcript variant 4 (LOC489833), mRNA Length = 3141 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 2116 cagcaacagcagcagcaggaggag 2139
>ref|XM_853820.1| PREDICTED: Canis familiaris similar to PERQ amino acid rich, with GYF domain 1, transcript variant 3 (LOC489833), mRNA Length = 3030 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 2026 cagcaacagcagcagcaggaggag 2049
>emb|CR713172.2|CNS0GD8G Tetraodon nigroviridis full-length cDNA Length = 626 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 254 cagcagcagcagcagcaggaggag 277
>ref|XM_843905.1| PREDICTED: Canis familiaris similar to transmembrane protein 52 (LOC607284), mRNA Length = 958 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 cagcagcagcaggaggagagcaag 217 ||||||||||||||||| |||||| Sbjct: 186 cagcagcagcaggaggacagcaag 163
>emb|CR703941.2|CNS0G641 Tetraodon nigroviridis full-length cDNA Length = 1320 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 943 cagcagcagcagcagcaggaggag 966
>emb|CR698740.2|CNS0G23K Tetraodon nigroviridis full-length cDNA Length = 1073 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 693 cagcagcagcagcagcaggaggag 716
>emb|CR693819.2|CNS0FYAV Tetraodon nigroviridis full-length cDNA Length = 1106 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 721 cagcagcagcagcagcaggaggag 744
>emb|CR692860.2|CNS0FXK8 Tetraodon nigroviridis full-length cDNA Length = 1299 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 918 cagcagcagcagcagcaggaggag 941
>emb|CR691582.2|CNS0FWKQ Tetraodon nigroviridis full-length cDNA Length = 1237 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 845 cagcagcagcagcagcaggaggag 868
>emb|CR685726.2|CNS0FS22 Tetraodon nigroviridis full-length cDNA Length = 1296 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 941 cagcagcagcagcagcaggaggag 964
>emb|CR682616.2|CNS0FPNO Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 atcagcagcagcaggaggag 211 |||||||||||||||||||| Sbjct: 725 atcagcagcagcaggaggag 744
>emb|CR675900.2|CNS0FKHU Tetraodon nigroviridis full-length cDNA Length = 1201 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cagcatcagcagcagcaggaggag 211 ||||| |||||||||||||||||| Sbjct: 815 cagcagcagcagcagcaggaggag 838 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,787,930 Number of Sequences: 3902068 Number of extensions: 3787930 Number of successful extensions: 206440 Number of sequences better than 10.0: 494 Number of HSP's better than 10.0 without gapping: 510 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 194905 Number of HSP's gapped (non-prelim): 11424 length of query: 340 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 318 effective length of database: 17,147,199,772 effective search space: 5452809527496 effective search space used: 5452809527496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)