Clone Name | bastl09e04 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RV167_YEAST (P39743) Reduced viability upon starvation protein 167 | 29 | 3.4 |
---|
>RV167_YEAST (P39743) Reduced viability upon starvation protein 167| Length = 482 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +3 Query: 45 RRKQSLATAV--PVTGXXXXXXXXXXXXXXXXLYIASTSASASPQGRGEPEHARSHASQP 218 RRK +ATA PV+G Y +T+ S +P G G A S+A+QP Sbjct: 288 RRKYGVATAEGSPVSGASSGVGYGAG-------YDPATATSPTPTGYGYGAAAPSYAAQP 340 Query: 219 AA 224 AA Sbjct: 341 AA 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.309 0.122 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,717,560 Number of Sequences: 219361 Number of extensions: 321273 Number of successful extensions: 692 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 682 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 692 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)