Clone Name | bastl09e01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC148176.11| Medicago truncatula clone mth2-3j15, complete sequence Length = 119267 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 aaaaatccaataccacatt 19 ||||||||||||||||||| Sbjct: 9993 aaaaatccaataccacatt 10011
>gb|AC079178.20| Homo sapiens Xp BAC RP11-702C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114665 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aatccaataccacattgat 22 ||||||||||||||||||| Sbjct: 71213 aatccaataccacattgat 71195
>gb|AY277973.1| Takifugu rubripes transcription factor Sox5 (Sox5) gene, complete cds Length = 61929 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 20 gatcgctcgctcgcccgc 37 |||||||||||||||||| Sbjct: 13306 gatcgctcgctcgcccgc 13323
>gb|AC092100.5| Homo sapiens BAC clone RP11-666G4 from 7, complete sequence Length = 122099 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 aaaaatccaataccacat 18 |||||||||||||||||| Sbjct: 71746 aaaaatccaataccacat 71763
>emb|AL031885.3|HS510B21 Human DNA sequence from clone RP3-510B21 on chromosome 6p11.2-12.3 Contains a pseudogene similar to CLNS1B (chloride channel, nucleotide-sensitive, 1B), complete sequence Length = 108994 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 aaaatccaataccacatt 19 |||||||||||||||||| Sbjct: 38118 aaaatccaataccacatt 38101
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence Length = 196383 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 atccaataccacattgat 22 |||||||||||||||||| Sbjct: 46054 atccaataccacattgat 46071
>gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete sequence Length = 210140 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 aaaatccaataccacatt 19 |||||||||||||||||| Sbjct: 163158 aaaatccaataccacatt 163175
>gb|M63707.1|MUSKAPG Mouse kidney androgen-regulated protein (KAP) gene, complete cds Length = 4807 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 atccaataccacattgat 22 |||||||||||||||||| Sbjct: 1261 atccaataccacattgat 1244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 210,673 Number of Sequences: 3902068 Number of extensions: 210673 Number of successful extensions: 62438 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62425 Number of HSP's gapped (non-prelim): 13 length of query: 38 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 18 effective length of database: 17,155,003,908 effective search space: 308790070344 effective search space used: 308790070344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)