Clone Information

BLAST Search Result

Clone Name	bastl09d10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein)...	145	5e-35
2	COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein)...	143	2e-34
3	COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein)...	143	2e-34
4	COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (...	140	9e-34
5	COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat...	130	1e-30
6	COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein)...	121	8e-28
7	COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein)...	115	3e-26
8	COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat...	114	7e-26
9	COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) ...	65	6e-11
10	COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) ...	65	6e-11
11	COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) ...	58	1e-08
12	Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409	37	0.014
13	COPA_CANFA (P40765) Coatomer subunit alpha (Alpha-coat protein) ...	35	0.055
14	KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homo...	35	0.072
15	TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subuni...	35	0.072
16	GBB_ORYSA (Q40687) Guanine nucleotide-binding protein beta subunit	35	0.072
17	GBB_MAIZE (P49178) Guanine nucleotide-binding protein beta subunit	35	0.072
18	TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subuni...	35	0.072
19	KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Kat...	34	0.12
20	KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog	34	0.12
21	TLE6_MOUSE (Q9WVB3) Transducin-like enhancer protein 6 (Groucho-...	34	0.12
22	Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143	34	0.12
23	KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Kat...	34	0.12
24	KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Kat...	34	0.12
25	WSB2_MOUSE (O54929) WD repeat and SOCS box-containing protein 2 ...	33	0.27
26	KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Kat...	33	0.27
27	GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subu...	33	0.36
28	LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migratio...	32	0.46
29	YR154_MIMIV (Q5UPL6) Putative BTB/POZ domain and WD-repeat prote...	32	0.46
30	POL_HV2G1 (P18042) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains:...	32	0.61
31	YRIQ_CAEEL (P90794) Hypothetical WD-repeat protein D2030.9	32	0.61
32	ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr...	32	0.79
33	POL_HV2D1 (P17757) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains:...	32	0.79
34	MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1	32	0.79
35	ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr...	32	0.79
36	PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	32	0.79
37	GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit	31	1.0
38	WDS_DROME (Q9V3J8) Protein will die slowly	31	1.0
39	PWP2_MOUSE (Q8BU03) Periodic tryptophan protein 2 homolog	31	1.0
40	PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20	31	1.4
41	MYO2A_SACCA (Q875X3) Myosin-2A (Class V unconventional myosin MY...	31	1.4
42	AAC3_DICDI (P14197) AAC-rich mRNA clone AAC3 protein (Fragment)	31	1.4
43	LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB ...	30	1.8
44	LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase I...	30	1.8
45	LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase I...	30	1.8
46	LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase I...	30	1.8
47	LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase I...	30	1.8
48	WSB2_HUMAN (Q9NYS7) WD repeat and SOCS box-containing protein 2 ...	30	1.8
49	PFS2_YEAST (P42841) Protein PFS2	30	1.8
50	PLRG1_MOUSE (Q922V4) Pleiotropic regulator 1	30	2.3
51	WDR23_MOUSE (Q91VU6) WD-repeat protein 23	30	2.3
52	WDR23_HUMAN (Q8TEB1) WD-repeat protein 23	30	2.3
53	PLRG1_RAT (Q9WUC8) Pleiotropic regulator 1	30	2.3
54	PLRG1_HUMAN (O43660) Pleiotropic regulator 1	30	2.3
55	SWD1_SCHPO (O42858) Set1 complex component swd1 (Set1C component...	30	3.0
56	ALDH3_YEAST (P54114) Aldehyde dehydrogenase [NAD(P)+] 2 (EC 1.2....	30	3.0
57	WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene ...	30	3.0
58	WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene ...	30	3.0
59	PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog	30	3.0
60	SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains pro...	30	3.0
61	PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog	30	3.0
62	PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	30	3.0
63	COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (...	30	3.0
64	WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A	30	3.0
65	PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homol...	29	3.9
66	PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	29	3.9
67	PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	29	3.9
68	LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase I...	29	3.9
69	YTM1_YEAST (Q12024) Microtubule-associated protein YTM1	29	3.9
70	ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop...	29	3.9
71	GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subuni...	29	3.9
72	GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subu...	29	3.9
73	WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A	29	5.1
74	IRAK1_HUMAN (P51617) Interleukin-1 receptor-associated kinase 1 ...	29	5.1
75	HXD13_HETFR (Q9IA17) Homeobox protein Hox-D13	29	5.1
76	PDE8B_HUMAN (O95263) High-affinity cAMP-specific and IBMX-insens...	29	5.1
77	HIR1_YEAST (P32479) Histone transcription regulator 1	29	5.1
78	PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	29	5.1
79	PRP19_CAEEL (Q10051) PRP19/PSO4 homolog	29	5.1
80	GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subu...	29	5.1
81	GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subu...	29	5.1
82	GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subu...	29	5.1
83	WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A	29	5.1
84	GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subu...	29	5.1
85	TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)	29	5.1
86	4ET_HUMAN (Q9NRA8) Eukaryotic translation initiation factor 4E t...	28	6.7
87	SKB15_SCHPO (O74453) Shk1 kinase-binding protein 15	28	6.7
88	COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Co...	28	6.7
89	CHEB1_PSEAE (O87125) Chemotaxis response regulator protein-gluta...	28	6.7
90	SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component...	28	6.7
91	PWP2_HUMAN (Q15269) Periodic tryptophan protein 2 homolog	28	6.7
92	IL32_HUMAN (P24001) Interleukin-32 precursor (IL-32) (Natural ki...	28	6.7
93	TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1	28	8.8
94	YMM1_CAEEL (P34489) Hypothetical protein K01B6.1	28	8.8
95	PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	28	8.8
96	MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-rela...	28	8.8
97	HAT2_YARLI (Q6C7Q4) Histone acetyltransferase type B subunit 2 (...	28	8.8

>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score =  145 bits (365), Expect = 5e-35
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +3

Query: 168 MPLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 347
           MPLRLDIKRKL  RS+RVKS DLHPTEPW+L+SLY+GSVC+WN++TQT+VK+FEV +LPV
Sbjct: 1   MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60

Query: 348 RSAKFIARKQWVVAGADDMFIRVYN 422
           R+AKF+ARK WVV GADDM IRV+N
Sbjct: 61  RAAKFVARKNWVVTGADDMQIRVFN 85



 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+++S      V IW+YQ +T V++ E     V  A F      ++ G++D  +R+++
Sbjct: 199 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257

to top

>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score =  143 bits (360), Expect = 2e-34
 Identities = 64/84 (76%), Positives = 77/84 (91%)
 Frame = +3

Query: 171 PLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 350
           PLRLDIKRKL  RS+RVKS DLHPTEPW+L+SLY+GSVC+WN++TQT+VK+FEV +LPVR
Sbjct: 1   PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 60

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
           +AKF+ARK WVV GADDM IRV+N
Sbjct: 61  AAKFVARKNWVVTGADDMQIRVFN 84



 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+++S      V IW+YQ +T V++ E     V  A F      ++ G++D  +R+++
Sbjct: 198 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 256

to top

>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score =  143 bits (360), Expect = 2e-34
 Identities = 64/84 (76%), Positives = 77/84 (91%)
 Frame = +3

Query: 171 PLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 350
           PLRLDIKRKL  RS+RVKS DLHPTEPW+L+SLY+GSVC+WN++TQT+VK+FEV +LPVR
Sbjct: 1   PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 60

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
           +AKF+ARK WVV GADDM IRV+N
Sbjct: 61  AAKFVARKNWVVTGADDMQIRVFN 84



 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+++S      V IW+YQ +T V++ E     V  A F      ++ G++D  +R+++
Sbjct: 198 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 256

to top

>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 904

 Score =  140 bits (354), Expect = 9e-34
 Identities = 63/84 (75%), Positives = 76/84 (90%)
 Frame = +3

Query: 171 PLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 350
           PLRLDIKRKL   S+RVKS DLHPTEPW+L+SLY+GSVC+WN++TQT+VK+FEV +LPVR
Sbjct: 1   PLRLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR 60

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
           +AKF+ARK WVV GADDM IRV+N
Sbjct: 61  AAKFVARKNWVVTGADDMQIRVFN 84



 Score = 32.3 bits (72), Expect = 0.46
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+++S      V IW+YQ +T V++ E     V  A F      ++ G++D  +R+++
Sbjct: 198 KPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWH 256

to top

>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)|
           (Beta'-COP)
          Length = 1000

 Score =  130 bits (328), Expect = 1e-30
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +3

Query: 168 MPLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 347
           MPLRLD+KRKL  RS+RVK  DLHP E W+L++LY+G+V IWNY+TQT+VKSFEV ++PV
Sbjct: 1   MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPV 60

Query: 348 RSAKFIARKQWVVAGADDMFIRVYN 422
           R+AKF+ RK WVV G+DDM IRV+N
Sbjct: 61  RAAKFVPRKSWVVTGSDDMHIRVFN 85



 Score = 33.5 bits (75), Expect = 0.21
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+I+S      V IW+YQ +T V++ +     V S  F      ++ G++D  +R+++
Sbjct: 199 KPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWH 257



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 210 SERVKSADLHPTEPWILSSLYSGSVCIWNYQTQ-TMVKSFE 329
           S+ ++S  +HPT P+++SS     V +W++  +  M +SFE
Sbjct: 99  SDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFE 139

to top

>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
          Length = 914

 Score =  121 bits (303), Expect = 8e-28
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +3

Query: 168 MPLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 347
           MPL+LDIKR+L  RS+RVK  DLHP EPW+L +LY+G V I NY+ Q MVK FEV ++PV
Sbjct: 1   MPLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPV 60

Query: 348 RSAKFIARKQWVVAGADDMFIRVYN 422
           RSA+F+ARK W++ G+DDM IRV+N
Sbjct: 61  RSARFVARKNWILTGSDDMQIRVFN 85



 Score = 31.6 bits (70), Expect = 0.79
 Identities = 15/59 (25%), Positives = 32/59 (54%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+++S      V IW+YQ +T V++ E     + +  F      V+ G++D  +R+++
Sbjct: 199 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWH 257

to top

>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
          Length = 889

 Score =  115 bits (289), Expect = 3e-26
 Identities = 49/83 (59%), Positives = 66/83 (79%)
 Frame = +3

Query: 174 LRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRS 353
           ++LDIK+  + RS+RVK  D HPTEPW+L++LYSG V +WNY+TQ  V+S +VTE PVR+
Sbjct: 1   MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60

Query: 354 AKFIARKQWVVAGADDMFIRVYN 422
            KFIARK W++ G+DD  IRV+N
Sbjct: 61  GKFIARKNWIIVGSDDFRIRVFN 83



 Score = 33.5 bits (75), Expect = 0.21
 Identities = 15/61 (24%), Positives = 36/61 (59%)
 Frame = +3

Query: 240 PTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVY 419
           P +P+++++    ++ IW+YQT++ V + E     V  A F      +++G++D  ++++
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

Query: 420 N 422
           N
Sbjct: 256 N 256



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIA-----RKQWV 383
           V  A  HPT P I+S    G++ IWN  T  + K+  V    +  +  IA     RK ++
Sbjct: 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV---GLERSWCIATHPTGRKNYI 287

Query: 384 VAGADDMF 407
            +G D+ F
Sbjct: 288 ASGFDNGF 295



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQ-TMVKSFEVTELPVRSAKFIARKQWVVA-G 392
           ++S  +HPT+P++LS     +V +WN++    + ++FE  E  V    F  +     A G
Sbjct: 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159

Query: 393 ADDMFIRVYN 422
             D  ++V++
Sbjct: 160 CLDRTVKVWS 169

to top

>COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat protein)|
           (Beta'-COP)
          Length = 796

 Score =  114 bits (286), Expect = 7e-26
 Identities = 47/83 (56%), Positives = 65/83 (78%)
 Frame = +3

Query: 174 LRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRS 353
           +RLD +RKL   +ERVK+ D HPTEPW+++S Y+G V IWNY TQT+V+SF++ ++P+R+
Sbjct: 2   MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRA 61

Query: 354 AKFIARKQWVVAGADDMFIRVYN 422
             FIARK W V G+DD  +RVYN
Sbjct: 62  CAFIARKNWFVCGSDDFQVRVYN 84



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/59 (20%), Positives = 35/59 (59%)
 Frame = +3

Query: 246 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           +P+++++     + +W+YQT+  V+  E     V  A F ++   +++G++D  +++++
Sbjct: 198 KPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWH 256

to top

>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin]
          Length = 1224

 Score = 65.1 bits (157), Expect = 6e-11
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARK 374
           K   +S RVK    HP  PWIL+SL++G + +W+Y+  T++  F+  + PVR   F  ++
Sbjct: 4   KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 375 QWVVAGADDMFIRVYN 422
              V+G DD  I+V+N
Sbjct: 64  PLFVSGGDDYKIKVWN 79



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 19/68 (27%), Positives = 36/68 (52%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           +++   H   PWILS+    ++ +WN+Q++T V         V  A+F   +  VV+ + 
Sbjct: 96  IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASL 155

Query: 399 DMFIRVYN 422
           D  +RV++
Sbjct: 156 DQTVRVWD 163



 Score = 35.0 bits (79), Expect = 0.072
 Identities = 18/76 (23%), Positives = 35/76 (46%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARK 374
           K  +    V+  D H  +P  +S      + +WNY+ +  + +       +R+  F    
Sbjct: 46  KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105

Query: 375 QWVVAGADDMFIRVYN 422
            W+++ +DD  IRV+N
Sbjct: 106 PWILSASDDQTIRVWN 121



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTEL-----PVR 350
           +K  L      V  A  HPT P I+S      V IW        K++EV         V 
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES---KAWEVDTCRGHYNNVS 253

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
            A F  R++ +++ ++D  IRV++
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWD 277

to top

>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin]
          Length = 1224

 Score = 65.1 bits (157), Expect = 6e-11
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARK 374
           K   +S RVK    HP  PWIL+SL++G + +W+Y+  T++  F+  + PVR   F  ++
Sbjct: 4   KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63

Query: 375 QWVVAGADDMFIRVYN 422
              V+G DD  I+V+N
Sbjct: 64  PLFVSGGDDYKIKVWN 79



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 19/68 (27%), Positives = 36/68 (52%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           +++   H   PWILS+    ++ +WN+Q++T V         V  A+F   +  VV+ + 
Sbjct: 96  IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL 155

Query: 399 DMFIRVYN 422
           D  +RV++
Sbjct: 156 DQTVRVWD 163



 Score = 35.0 bits (79), Expect = 0.072
 Identities = 18/76 (23%), Positives = 35/76 (46%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARK 374
           K  +    V+  D H  +P  +S      + +WNY+ +  + +       +R+  F    
Sbjct: 46  KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY 105

Query: 375 QWVVAGADDMFIRVYN 422
            W+++ +DD  IRV+N
Sbjct: 106 PWILSASDDQTIRVWN 121



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTEL-----PVR 350
           +K  L      V  A  HPT P I+S      V IW        K++EV         V 
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES---KAWEVDTCRGHYNNVS 253

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
            A F  R++ +++ ++D  IRV++
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWD 277

to top

>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
          Length = 1201

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 26/76 (34%), Positives = 43/76 (56%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARK 374
           K   +S R K    HP+ PW+L +L+S ++ +W+Y+  T++  FE  E PVR   F   +
Sbjct: 6   KFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQ 65

Query: 375 QWVVAGADDMFIRVYN 422
              V+  DD  I+V++
Sbjct: 66  PIFVSAGDDYTIKVWS 81



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+  D HPT+P  +S+    ++ +W+  T   + +       VR+  F     W+++ +D
Sbjct: 56  VRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASD 115

Query: 399 DMFIRVYN 422
           D  IR++N
Sbjct: 116 DQTIRIWN 123



 Score = 31.6 bits (70), Expect = 0.79
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V++   H   PWI+S+    ++ IWN+Q +  +         V  A+F      +V+ + 
Sbjct: 98  VRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASL 157

Query: 399 DMFIRVYN 422
           D  IR+++
Sbjct: 158 DETIRIWD 165

to top

>Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409|
          Length = 326

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 20/78 (25%), Positives = 40/78 (51%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I+R+++    R+ + +  P    +L+S  +GS  +WN   + + +   V    V SA+F 
Sbjct: 204 IEREISTGQGRINNVNFSPNGEQLLTSGINGSAKLWNLAGELIHEYKVVPTGWVNSAQFY 263

Query: 366 ARKQWVVAGADDMFIRVY 419
            + +W+   +DD  IR +
Sbjct: 264 PKGEWLATASDDGTIRFW 281

to top

>COPA_CANFA (P40765) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin] (Fragment)
          Length = 35

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWILSSLYSGSV 284
           K   +S RVK    HP  PWIL+SL++G +
Sbjct: 4   KFETKSARVKGLSFHPKRPWILTSLHNGVI 33

to top

>KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homolog 1|
          Length = 837

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 18/79 (22%), Positives = 36/79 (45%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I R L        S D HP   +  S     ++ IW+ + +  + +++     V   +F 
Sbjct: 93  IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT 152

Query: 366 ARKQWVVAGADDMFIRVYN 422
              +WVV+G +D  ++V++
Sbjct: 153 PDGRWVVSGGEDNIVKVWD 171

to top

>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 801

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V  A   P   ++LSS   G+V +W+ QT T +  ++    PV   +F     + V+G  
Sbjct: 547 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 606

Query: 399 DMFIRVY 419
           D   R++
Sbjct: 607 DRVARLW 613

to top

>GBB_ORYSA (Q40687) Guanine nucleotide-binding protein beta subunit|
          Length = 380

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 23/84 (27%), Positives = 35/84 (41%)
 Frame = +3

Query: 171 PLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 350
           P  L   R L   S +V S D  P + WI+S+   G + +WN  T     + ++    V 
Sbjct: 53  PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM 112

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
           +  F    Q V  G  D    ++N
Sbjct: 113 TCAFAPNGQSVACGGLDSACSIFN 136

to top

>GBB_MAIZE (P49178) Guanine nucleotide-binding protein beta subunit|
          Length = 380

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 23/84 (27%), Positives = 35/84 (41%)
 Frame = +3

Query: 171 PLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVR 350
           P  L   R L   S +V S D  P + WI+S+   G + +WN  T     + ++    V 
Sbjct: 53  PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM 112

Query: 351 SAKFIARKQWVVAGADDMFIRVYN 422
           +  F    Q V  G  D    ++N
Sbjct: 113 ACAFAPNGQSVACGGLDSACSIFN 136

to top

>TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 800

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V  A   P   ++LSS   G+V +W+ QT T +  ++    PV   +F     + V+G  
Sbjct: 546 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 605

Query: 399 DMFIRVY 419
           D   R++
Sbjct: 606 DRVARLW 612

to top

>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 658

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 17/79 (21%), Positives = 36/79 (45%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I R L      + S D HP   ++ S     ++ +W+ + +  V  +      VR  +F 
Sbjct: 97  ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156

Query: 366 ARKQWVVAGADDMFIRVYN 422
              +W+ + ADD  +++++
Sbjct: 157 PDGKWLASAADDHTVKLWD 175



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
 Frame = +3

Query: 183 DIKRK-----LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 347
           DI+RK         S+ V+     P   W+ S+    +V +W+     M+  F     PV
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192

Query: 348 RSAKFIARKQWVVAGADDMFIRVYN 422
              +F   +  + +G+ D  IR ++
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWD 217



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 16/75 (21%), Positives = 39/75 (52%)
 Frame = +3

Query: 198 LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQ 377
           L   +  V+S  L+  E  I++   SGS+ +W+ +   ++++    +  + S  F    +
Sbjct: 59  LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118

Query: 378 WVVAGADDMFIRVYN 422
           +V +G+ D  I++++
Sbjct: 119 FVASGSQDTNIKLWD 133

to top

>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog|
          Length = 694

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/79 (20%), Positives = 36/79 (45%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I R L      + S D HP   ++ S     ++ +W+ + +  V  ++     VR   F 
Sbjct: 97  ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFS 156

Query: 366 ARKQWVVAGADDMFIRVYN 422
              +W+ + +DD  +++++
Sbjct: 157 PDGKWLASASDDSTVKLWD 175

to top

>TLE6_MOUSE (Q9WVB3) Transducin-like enhancer protein 6 (Groucho-related|
           protein 6)
          Length = 581

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +3

Query: 240 PTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVY 419
           PTE W+L  L +G  C++N + +  V + +  +  +   KF    +W  +     FI V+
Sbjct: 478 PTEDWLLLGLANGQHCLFNSRKRDQVLTVDTKDNTILGLKFSPNGKWWASVGMGNFITVH 537

Query: 420 N 422
           +
Sbjct: 538 S 538

to top

>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143|
          Length = 1191

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/77 (20%), Positives = 35/77 (45%)
 Frame = +3

Query: 192  RKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIAR 371
            R +    +R+      P   ++LS+   G+  IW+ + Q ++ + +   LP+        
Sbjct: 1032 RSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVEGQ-LLHTLKSDPLPIDQIAISPD 1090

Query: 372  KQWVVAGADDMFIRVYN 422
             QW+   A D  +R+++
Sbjct: 1091 SQWIATAASDGMVRLWD 1107



 Score = 33.5 bits (75), Expect = 0.21
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 204  QRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKS 323
            QR E ++S  LHPT P + +    G++ +WN+   T+++S
Sbjct: 995  QRKEPIRSVSLHPTLPQLAAGDEQGNLTLWNFD-GTLIRS 1033

to top

>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 655

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 17/79 (21%), Positives = 36/79 (45%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I R L      + S D HP   ++ S     ++ +W+ + +  V  +      VR  +F 
Sbjct: 97  ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156

Query: 366 ARKQWVVAGADDMFIRVYN 422
              +W+ + ADD  +++++
Sbjct: 157 PDGKWLASAADDHTVKLWD 175



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
 Frame = +3

Query: 183 DIKRK-----LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 347
           DI+RK         S+ V+     P   W+ S+    +V +W+     M+  F     PV
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192

Query: 348 RSAKFIARKQWVVAGADDMFIRVYN 422
              +F   +  + +G+ D  IR ++
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWD 217



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 16/75 (21%), Positives = 39/75 (52%)
 Frame = +3

Query: 198 LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQ 377
           L   +  V+S  L+  E  I++   SGS+ +W+ +   ++++    +  + S  F    +
Sbjct: 59  LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118

Query: 378 WVVAGADDMFIRVYN 422
           +V +G+ D  I++++
Sbjct: 119 FVASGSQDTNIKLWD 133

to top

>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 657

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/79 (20%), Positives = 36/79 (45%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I R L      + S D HP   ++ S      + +W+ + +  +  ++     VR  +F 
Sbjct: 96  ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS 155

Query: 366 ARKQWVVAGADDMFIRVYN 422
              +W+ + ADD  +++++
Sbjct: 156 PDGKWLASAADDHTVKLWD 174



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/83 (16%), Positives = 42/83 (50%)
 Frame = +3

Query: 174 LRLDIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRS 353
           ++  ++ +L   +  ++S  +   E  I++   SGS+ +W+ +   ++++    +  + S
Sbjct: 50  VKAQLRHELTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICS 109

Query: 354 AKFIARKQWVVAGADDMFIRVYN 422
             F     +V +G+ D  I++++
Sbjct: 110 LDFHPYGSFVASGSLDTDIKLWD 132

to top

>WSB2_MOUSE (O54929) WD repeat and SOCS box-containing protein 2 (WSB-2) (SOCS|
           box-containing WD protein SWiP-2)
          Length = 404

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
 Frame = +3

Query: 192 RKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTEL---------- 341
           RKL      V S D  P    ++++ Y  SV +W+  T   ++S   T+L          
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGARLRSLHHTQLEPTMDDSDVH 292

Query: 342 --PVRSAKFIARKQWVVAGADDMFIRVY 419
              +RS  F     ++   ADD  +R++
Sbjct: 293 MSSLRSVCFSPEGLYLATVADDRLLRIW 320

to top

>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 690

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 16/79 (20%), Positives = 37/79 (46%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           I R L      ++  D HP   ++ S     +V +W+ + +  + +++     V   KF 
Sbjct: 93  IVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFS 152

Query: 366 ARKQWVVAGADDMFIRVYN 422
              +W+V  ++D  I++++
Sbjct: 153 PDGKWLVTASEDTTIKLWD 171

to top

>GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subunit-like|
           protein (Cross-pathway control WD-repeat protein cpc-2)
          Length = 316

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 189 KRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIA 368
           KR+L   S  V    +     + LS+ +  ++ +W   T T  + F      V S  F A
Sbjct: 56  KRRLHGHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVLSVSFSA 115

Query: 369 RKQWVVAGADDMFIRVYN 422
             + +V+G+ D  I+++N
Sbjct: 116 DNRQIVSGSRDRTIKLWN 133

to top

>LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migration abnormal|
           protein 1)
          Length = 404

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = +3

Query: 183 DIKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKF 362
           D+   L      V+    HP   +++S     ++ +W    Q  +K+ E  E  V +  F
Sbjct: 323 DVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAF 382

Query: 363 IARKQWVVAGADDMFIRVY 419
                +V+ G+ DM  +V+
Sbjct: 383 HQTSPFVITGSVDMSCKVW 401

to top

>YR154_MIMIV (Q5UPL6) Putative BTB/POZ domain and WD-repeat protein R154|
          Length = 468

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +3

Query: 255 ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           IL   ++G + IWN +  T+VKS ++ ++P+ S  +      ++    D  +R+ N
Sbjct: 376 ILVGCHNGLMDIWNLKKLTLVKSTQLFDVPIISMTYSPNGDQLIVANCDREVRILN 431

to top

>POL_HV2G1 (P18042) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix|
           protein p17 (MA); Capsid protein p24 (CA); p2 spacer
           peptide; Nucleocapsid protein* (NC*); Transframe peptide
           (TF) (p6 pol); Protease (EC 3.4.23.47) (Retropepsin)
           (PR); Reverse trans
          Length = 1463

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 56  REAGHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVG--YQEEARAEVGEGQ 223
           R+AG  R  +    AP  P G SSS G+   + PSR ++  +G  Y    RAE  EG+
Sbjct: 428 RQAGFLRDGSMGKEAPQLPRGPSSS-GADTNSTPSRSSSGSIGKIYAAGERAEGAEGE 484

to top

>YRIQ_CAEEL (P90794) Hypothetical WD-repeat protein D2030.9|
          Length = 571

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNY 299
           + R+L   +  V+  D HPTE  I+SS + G   +W +
Sbjct: 476 VSRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTW 513

to top

>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 65  GHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVG 184
           G P G   H P PT P+  SSS  S  GA P++    PVG
Sbjct: 245 GGPNGGKQHPP-PTTPISVSSSGAS--GAPPTKPPTTPVG 281

to top

>POL_HV2D1 (P17757) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix|
           protein p17 (MA); Capsid protein p24 (CA); p2 spacer
           peptide; Nucleocapsid protein* (NC*); Transframe peptide
           (TF) (p6 pol); Protease (EC 3.4.23.47) (Retropepsin)
           (PR); Reverse trans
          Length = 1461

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 56  REAGHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVG--YQEEARAEVGEGQ 223
           R+AG   G    A AP  P G SSS G+   + P+R ++ PVG  Y    +AE  EG+
Sbjct: 427 RQAGFLDGPTGKA-APQLPRGPSSS-GADTNSTPNRSSSGPVGEIYAAREKAERAEGE 482

to top

>MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1|
          Length = 1319

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 68  HPRGSASHA-PAPTNPLGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVGEGQV 226
           H  G++SHA PAP  PL  S +R + F  LPS  ++    +  E R    +G V
Sbjct: 177 HSSGASSHAVPAPCLPLDQSPNRAASFHGLPS--SSGSDSHSLEPRRVTNQGAV 228

to top

>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 65  GHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVG 184
           G P G   H P PT P+  SSS  S  GA P++    PVG
Sbjct: 244 GGPNGGKQHPP-PTTPISVSSSGAS--GAPPTKPPTTPVG 280

to top

>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 472

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V S D+HPT   ++S+       +W+ +T+  V      +  +   KF A +  V+  + 
Sbjct: 250 VYSLDIHPTLDVLVSAGRDAVARVWDIRTRDPVVVLSGHKSTINRVKFQASEPQVITASA 309

Query: 399 DMFIRVYN 422
           D  +R++N
Sbjct: 310 DETVRLWN 317

to top

>GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit|
          Length = 423

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 276 GSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
           G   IW+ ++ + V+SF V +  + + +F      +VAG+D+  I +Y+
Sbjct: 250 GYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSIVAGSDNGAINMYD 298

to top

>WDS_DROME (Q9V3J8) Protein will die slowly|
          Length = 361

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 17/78 (21%), Positives = 35/78 (44%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           +K  LA  ++ V +    P   W+ SS     + IW        K+    +L +    + 
Sbjct: 64  LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123

Query: 366 ARKQWVVAGADDMFIRVY 419
           +  + +V+G+DD  ++V+
Sbjct: 124 SDSRLLVSGSDDKTLKVW 141

to top

>PWP2_MOUSE (Q8BU03) Periodic tryptophan protein 2 homolog|
          Length = 919

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +3

Query: 141 ASARFRAATMPLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYS-GSVCIWNYQTQTMV 317
           AS  F    +P   ++   L+   +RV S  ++ +  WI       G + +W +Q+++ V
Sbjct: 308 ASGIFHLHELP-EFNLIHSLSISDQRVASVAINSSGDWIAFGCSGMGQLLVWEWQSESYV 366

Query: 318 KSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
              +     + +  +    Q++V G DD  ++V+N
Sbjct: 367 LKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWN 401

to top

>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20|
          Length = 606

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   D HP    + S     +V IW+++ Q  V +F   +  + S +F    + V +G+ 
Sbjct: 371 VAGVDFHPAGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHLGEVVASGSL 430

Query: 399 DMFIRVYN 422
           D  +R+++
Sbjct: 431 DHTVRLWD 438

to top

>MYO2A_SACCA (Q875X3) Myosin-2A (Class V unconventional myosin MYO2A) (Type V|
            myosin heavy chain MYO2A) (Myosin V MYO2A)
          Length = 1567

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 113  LGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVGEGQVRGSASDRAMDFV 262
            LGT ++  +     PSR N  P G+   A   +   Q++   SD A D V
Sbjct: 1091 LGTVTTNTNIVPHTPSRENRMPSGHMRAAEENISPNQLKSIPSDTAADHV 1140

to top

>AAC3_DICDI (P14197) AAC-rich mRNA clone AAC3 protein (Fragment)|
          Length = 437

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/64 (21%), Positives = 30/64 (46%)
 Frame = +3

Query: 231 DLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFI 410
           +  PT  ++ +      V +W+ +    VK+F  +  P RS  F    Q++ A + +  I
Sbjct: 325 EFDPTGKYLAAGSADSIVSLWDIEDMMCVKTFIKSTFPCRSVSFSFDGQFIAASSFESTI 384

Query: 411 RVYN 422
            +++
Sbjct: 385 EIFH 388

to top

>LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+    H    +ILS     ++ +W+Y+ +  +K+    E  V S  F     +VV G+ 
Sbjct: 340 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 399

Query: 399 DMFIRVY 419
           D  ++V+
Sbjct: 400 DQTVKVW 406

to top

>LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+    H    +ILS     ++ +W+Y+ +  +K+    E  V S  F     +VV G+ 
Sbjct: 340 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 399

Query: 399 DMFIRVY 419
           D  ++V+
Sbjct: 400 DQTVKVW 406

to top

>LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+    H    +ILS     ++ +W+Y+ +  +K+    E  V S  F     +VV G+ 
Sbjct: 340 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 399

Query: 399 DMFIRVY 419
           D  ++V+
Sbjct: 400 DQTVKVW 406

to top

>LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+    H    +ILS     ++ +W+Y+ +  +K+    E  V S  F     +VV G+ 
Sbjct: 340 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 399

Query: 399 DMFIRVY 419
           D  ++V+
Sbjct: 400 DQTVKVW 406

to top

>LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+    H    +ILS     ++ +W+Y+ +  +K+    E  V S  F     +VV G+ 
Sbjct: 340 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 399

Query: 399 DMFIRVY 419
           D  ++V+
Sbjct: 400 DQTVKVW 406

to top

>WSB2_HUMAN (Q9NYS7) WD repeat and SOCS box-containing protein 2 (WSB-2) (CS|
           box-containing WD protein)
          Length = 404

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
 Frame = +3

Query: 192 RKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTEL---------- 341
           RKL      V S D  P    ++++ Y  +V +W+  T   ++S   T++          
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVH 292

Query: 342 --PVRSAKFIARKQWVVAGADDMFIRVY 419
              +RS  F     ++   ADD  +R++
Sbjct: 293 ISSLRSVCFSPEGLYLATVADDRLLRIW 320

to top

>PFS2_YEAST (P42841) Protein PFS2|
          Length = 465

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 255 ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVY 419
           ++ + YSG   +WN  + T     +  +  V + K+     W+++G  D  I+++
Sbjct: 108 LVVATYSGEFSLWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIW 162

to top

>PLRG1_MOUSE (Q922V4) Pleiotropic regulator 1|
          Length = 513

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/68 (23%), Positives = 33/68 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   DLHPT   +++     +  IW+ +T+  V +       V + +  A +  ++ G+ 
Sbjct: 290 VYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 349

Query: 399 DMFIRVYN 422
           D  IR+++
Sbjct: 350 DTTIRLWD 357

to top

>WDR23_MOUSE (Q91VU6) WD-repeat protein 23|
          Length = 549

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQ 302
           I +KL      V+    HP E  I+SS + G++ +W Y+
Sbjct: 475 IVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYR 513

to top

>WDR23_HUMAN (Q8TEB1) WD-repeat protein 23|
          Length = 546

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQ 302
           I +KL      V+    HP E  I+SS + G++ +W Y+
Sbjct: 475 IVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYR 513

to top

>PLRG1_RAT (Q9WUC8) Pleiotropic regulator 1|
          Length = 514

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/68 (23%), Positives = 33/68 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   DLHPT   +++     +  IW+ +T+  V +       V + +  A +  ++ G+ 
Sbjct: 291 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 350

Query: 399 DMFIRVYN 422
           D  IR+++
Sbjct: 351 DTTIRLWD 358

to top

>PLRG1_HUMAN (O43660) Pleiotropic regulator 1|
          Length = 514

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/68 (23%), Positives = 33/68 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   DLHPT   +++     +  IW+ +T+  V +       V + +  A +  ++ G+ 
Sbjct: 291 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 350

Query: 399 DMFIRVYN 422
           D  IR+++
Sbjct: 351 DTTIRLWD 358

to top

>SWD1_SCHPO (O42858) Set1 complex component swd1 (Set1C component swd1)|
           (COMPASS component swd1) (Complex proteins associated
           with set1 protein swd1)
          Length = 398

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
 Frame = +3

Query: 168 MPLRLDIKRKLAQRSERVKSADL----HPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVT 335
           +P   DI    + R  R K   L    HP+  +ILS    G   + +  T  +  S  +T
Sbjct: 147 LPTNPDIDENYSDRRNRSKHVTLVSFFHPSGEYILSGTSKGWFHVIDASTTKIRSSHRIT 206

Query: 336 ELPVRSAKFIARKQWVVAGADDMFIR 413
              ++  +    K++++  + D  IR
Sbjct: 207 SQSIKQIRLSFCKRFLIFNSTDRVIR 232

to top

>ALDH3_YEAST (P54114) Aldehyde dehydrogenase [NAD(P)+] 2 (EC 1.2.1.5)|
          Length = 506

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 222 KSADLHPTEPWILSSLY--SGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGA 395
           + ADL     W+ + ++  SG +C  N  ++  V+S  + +  V   K  A+K+W VAG 
Sbjct: 279 EDADLDKAIEWVANGIFFNSGQICTAN--SRVYVQS-SIYDKFVEKFKETAKKEWDVAGK 335

Query: 396 DDMF 407
            D F
Sbjct: 336 FDPF 339

to top

>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)|
           (WD-repeat protein BIG-3)
          Length = 334

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/79 (20%), Positives = 34/79 (43%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           +K  LA  ++ V S    P   W+ SS     + IW        K+    +L +    + 
Sbjct: 37  LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96

Query: 366 ARKQWVVAGADDMFIRVYN 422
           +    +V+ +DD  +++++
Sbjct: 97  SDSNLLVSASDDKTLKIWD 115

to top

>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)|
          Length = 334

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/79 (20%), Positives = 34/79 (43%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           +K  LA  ++ V S    P   W+ SS     + IW        K+    +L +    + 
Sbjct: 37  LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96

Query: 366 ARKQWVVAGADDMFIRVYN 422
           +    +V+ +DD  +++++
Sbjct: 97  SDSNLLVSASDDKTLKIWD 115

to top

>PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog|
          Length = 854

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +3

Query: 195 KLAQRSERVKSADLHPTEPWI-LSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIAR 371
           +L+     + +  ++ T  WI + S   G + +W +Q+++ V   +     + + ++ + 
Sbjct: 291 QLSITQSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSD 350

Query: 372 KQWVVAGADDMFIRVYN 422
            Q ++ GADD  I+V++
Sbjct: 351 GQRIITGADDGKIKVWD 367

to top

>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
           (Somatostatin receptor-interacting protein)
           (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
 Frame = +2

Query: 71  PRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVG------------ 214
           P G    +  P   LG+   R   + A+P R   A   YQ +A  E+             
Sbjct: 527 PAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSI 586

Query: 215 ------EGQVRGSASDRAMDFVESLLGECLHLELPN-ADNGEII*SHRVTGSF 352
                 EGQV+G       D +E +       +  + +D  + +  H   GS+
Sbjct: 587 GEGGFWEGQVKGRVGWFPSDCLEEVANRSQESKQESRSDKAKRLFRHYTVGSY 639

to top

>PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog|
          Length = 910

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 14/72 (19%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = +3

Query: 216 RVKSADLHPTEPWILSSLYSGSVC---IWNYQTQTMVKSFEVTELPVRSAKFIARKQWVV 386
           R+++   + T  W+      GS     +W +Q+++ V   +   L + +A++      + 
Sbjct: 317 RIQTVAWNLTGDWLAIGCGKGSTAQLVVWEWQSESYVMKQQAHSLRITTAEYSPDGSLMA 376

Query: 387 AGADDMFIRVYN 422
            GA+D  ++++N
Sbjct: 377 TGAEDGKVKIWN 388

to top

>PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog)|
          Length = 505

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/70 (21%), Positives = 32/70 (45%)
 Frame = +3

Query: 198 LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQ 377
           L   S++V S   HP++  + S+    ++ IW+    + V+     E  V      A   
Sbjct: 261 LKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGD 320

Query: 378 WVVAGADDMF 407
           ++++ +DD +
Sbjct: 321 YLLSSSDDQY 330

to top

>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 675

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 255 ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI-ARKQWVVAGADDMFIRVY 419
           I SS Y G V +W+  T+  +  +E  E    S  F       +V+G+DD  ++V+
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVW 491

to top

>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A|
          Length = 407

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/66 (18%), Positives = 32/66 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   D HP+   I ++    +V +W+ +T  +++ +++    V +  F     ++V  + 
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 249

Query: 399 DMFIRV 416
           D  +++
Sbjct: 250 DSTLKI 255

to top

>PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Neuronal|
           differentiation-related gene protein)
          Length = 504

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/70 (20%), Positives = 32/70 (45%)
 Frame = +3

Query: 198 LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQ 377
           L   +++V S   HP++  + S+    ++ IW+    + V+     E  V      A   
Sbjct: 260 LKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGD 319

Query: 378 WVVAGADDMF 407
           ++++ +DD +
Sbjct: 320 YLLSSSDDQY 329

to top

>PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear|
           matrix protein 200) (Nuclear matrix protein SNEV)
          Length = 504

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/70 (20%), Positives = 32/70 (45%)
 Frame = +3

Query: 198 LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQ 377
           L   +++V S   HP++  + S+    ++ IW+    + V+     E  V      A   
Sbjct: 260 LKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGD 319

Query: 378 WVVAGADDMF 407
           ++++ +DD +
Sbjct: 320 YLLSSSDDQY 329

to top

>PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear|
           matrix protein 200) (hPso4)
          Length = 504

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/70 (20%), Positives = 32/70 (45%)
 Frame = +3

Query: 198 LAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQ 377
           L   +++V S   HP++  + S+    ++ IW+    + V+     E  V      A   
Sbjct: 260 LKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGD 319

Query: 378 WVVAGADDMF 407
           ++++ +DD +
Sbjct: 320 YLLSSSDDQY 329

to top

>LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V+    H    +ILS     ++ +W+Y+ +  +K+    E  V S  F     +VV G  
Sbjct: 340 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGFV 399

Query: 399 DMFIRVY 419
           D  ++V+
Sbjct: 400 DQTVKVW 406

to top

>YTM1_YEAST (Q12024) Microtubule-associated protein YTM1|
          Length = 460

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V S D+      I+S  Y G V  W+       K +     P+R+ K+I+  + V AG D
Sbjct: 106 VSSLDVGDGSKHIISGSYDGIVRTWDLSGNVQ-KQYSGHSGPIRAVKYISNTRLVSAGND 164

to top

>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 65  GHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVG 184
           G P G   H P PT P+  SSS  S  GA P++    PVG
Sbjct: 246 GPPSGGKQHPP-PTTPIPISSSGAS--GAPPAKPPNTPVG 282

to top

>GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 DLHPTEPW--ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDM 404
           DL P+E     +S        +W+ ++   V++FE  E  V S ++        +G+DD 
Sbjct: 202 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA 261

Query: 405 FIRVYN 422
             R+Y+
Sbjct: 262 TCRLYD 267

to top

>GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 395

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 DLHPTEPW--ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDM 404
           DL P+E     +S        +W+ ++   V++FE  E  V S ++        +G+DD 
Sbjct: 244 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA 303

Query: 405 FIRVYN 422
             R+Y+
Sbjct: 304 TCRLYD 309

to top

>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A|
          Length = 405

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 11/66 (16%), Positives = 32/66 (48%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   D HP+   I ++    +V +W+ +T  +++ +++    V +  F     +++  + 
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASS 249

Query: 399 DMFIRV 416
           D  +++
Sbjct: 250 DSTLKI 255

to top

>IRAK1_HUMAN (P51617) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)|
           (IRAK-1)
          Length = 712

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = +2

Query: 65  GHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVGEGQVRGSASD 244
           GH   ++   P+P      SS+  +  GA P +  AAP G   +A  ++  G  +   SD
Sbjct: 530 GHSEAASCIPPSPQENSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESD 589

Query: 245 RAMDFVESLL 274
            ++  + + L
Sbjct: 590 ESLGGLSAAL 599

to top

>HXD13_HETFR (Q9IA17) Homeobox protein Hox-D13|
          Length = 284

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 86  SHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVGEGQVRGSASDRAMD 256
           S  PAPT+P   + S G  FG+  S ++   VG Q+          + G   D+ MD
Sbjct: 53  SPCPAPTSPPNPAISYGYHFGS--SYYSCRNVGIQQTGLKSGAHASLAGYPVDKYMD 107

to top

>PDE8B_HUMAN (O95263) High-affinity cAMP-specific and IBMX-insensitive|
           3',5'-cyclic phosphodiesterase 8B (EC 3.1.4.17)
           (HSPDE8B)
          Length = 885

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +2

Query: 59  EAGHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAP--VGYQEEARAEVGEGQVRG 232
           E+  PR + S +  P  PL     +     A+P    + P  V     AR E+G G   G
Sbjct: 22  ESSSPRQTTSVSQGPAAPLPGLFVQTDAADAIPPSRASGPPSVARVRRARTELGSGSSAG 81

Query: 233 SASDRA 250
           SA+  A
Sbjct: 82  SAAPAA 87

to top

>HIR1_YEAST (P32479) Histone transcription regulator 1|
          Length = 788

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/78 (17%), Positives = 35/78 (44%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI 365
           ++++L      ++     P    +++     SV +WN  T   +K F+V +  V+   F 
Sbjct: 77  VRKRLVAHDNDIQDICWAPDSSILVTVGLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFD 136

Query: 366 ARKQWVVAGADDMFIRVY 419
              ++    +DD  ++++
Sbjct: 137 PANKYFATTSDDRTMKIF 154

to top

>PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 427

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/68 (20%), Positives = 35/68 (51%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V + D+HPT   ++++     V +W+ +T+  V +    + P+   + +     V++ + 
Sbjct: 203 VHTVDIHPTVDVVVTAGRDSVVKVWDIRTRLPVMTLPGHKGPITKVRCLPVDPQVISSSV 262

Query: 399 DMFIRVYN 422
           D  IR+++
Sbjct: 263 DASIRLWD 270

to top

>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog|
          Length = 492

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V S + HP      +      V IW+ + QT+  +F      VRS  F     ++  G++
Sbjct: 341 VHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSE 400

Query: 399 DMFIRVYN 422
           D  +++++
Sbjct: 401 DGEVKLWD 408

to top

>GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 DLHPTEPW--ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDM 404
           DL P+E     +S        +W+ ++   V++FE  E  + S ++        +G+DD 
Sbjct: 202 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDA 261

Query: 405 FIRVYN 422
             R+Y+
Sbjct: 262 TCRLYD 267

to top

>GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 DLHPTEPW--ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDM 404
           DL P+E     +S        +W+ ++   V++FE  E  + S ++        +G+DD 
Sbjct: 202 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDA 261

Query: 405 FIRVYN 422
             R+Y+
Sbjct: 262 TCRLYD 267

to top

>GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 DLHPTEPW--ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDM 404
           DL P+E     +S        +W+ ++   V++FE  E  + S ++        +G+DD 
Sbjct: 202 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDA 261

Query: 405 FIRVYN 422
             R+Y+
Sbjct: 262 TCRLYD 267

to top

>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A|
          Length = 407

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 11/66 (16%), Positives = 31/66 (46%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V   D HP+   I ++    +V +W+ +T  +++ +++    V    F     +++  + 
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249

Query: 399 DMFIRV 416
           D  +++
Sbjct: 250 DSTLKI 255

to top

>GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 395

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 231 DLHPTEPW--ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGADDM 404
           DL P+E     +S        +W+ ++   V++FE  E  + S ++        +G+DD 
Sbjct: 244 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDA 303

Query: 405 FIRVYN 422
             R+Y+
Sbjct: 304 TCRLYD 309

to top

>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)|
          Length = 743

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFE 329
           IK +L   +    +  + P      S    G++ +W+ Q QTMV+ F+
Sbjct: 539 IKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQ 586

to top

>4ET_HUMAN (Q9NRA8) Eukaryotic translation initiation factor 4E transporter|
            (eIF4E transporter) (4E-T) (Eukaryotic translation
            initiation factor 4E nuclear import factor 1)
          Length = 985

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = +2

Query: 50   VRREAGHPRGSASHAPA---PTNPLGTSSSRG-----SRFGALPSRHNAAPVG 184
            ++R   HP GS SHA A    T P    S  G     S+    PS+ +++PVG
Sbjct: 902  LQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVG 954

to top

>SKB15_SCHPO (O74453) Shk1 kinase-binding protein 15|
          Length = 341

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWN 296
           I  +     +RVKS  ++P + +++++   GSVCIW+
Sbjct: 231 ILHEFTAHKKRVKS--VYPVDDYLITASSDGSVCIWD 265

to top

>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +3

Query: 255 ILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFI-ARKQWVVAGADDMFIRVY 419
           I SS Y G V +W   T+  +  +E  E    S  F       +V+G+DD  ++V+
Sbjct: 433 IASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVW 488

to top

>CHEB1_PSEAE (O87125) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 368

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 80  SASHAPAPTNPLGTSSSRGSRFGALPSRHNAAP 178
           S+SHAPA ++ +G S+  G+     P+  +AAP
Sbjct: 147 SSSHAPASSSSVGASARVGAGASPAPASTSAAP 179

to top

>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)|
           (COMPASS component swd3) (Complex proteins associated
           with set1 protein swd3)
          Length = 380

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V    + P + WI +S   G++ IW+  T  +  +       +   K+    +++ + +D
Sbjct: 57  VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASD 116

Query: 399 DMFIRVYN 422
           D  IR+++
Sbjct: 117 DKTIRIWD 124

to top

>PWP2_HUMAN (Q15269) Periodic tryptophan protein 2 homolog|
          Length = 919

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +3

Query: 141 ASARFRAATMPLRLDIKRKLAQRSERVKSADLHPTEPWILSSLYS-GSVCIWNYQTQTMV 317
           AS  F    +P   ++   L+   + + S  ++ +  WI       G + +W +Q+++ V
Sbjct: 308 ASGIFHLHELP-EFNLIHSLSISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYV 366

Query: 318 KSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYN 422
              +     + +  +    Q++V G DD  ++V+N
Sbjct: 367 LKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWN 401

to top

>IL32_HUMAN (P24001) Interleukin-32 precursor (IL-32) (Natural killer cells|
           protein 4)
          Length = 234

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 152 LPSRHNAAPVGYQEEARAEVGEGQVRGSASDRAMDFVESLL 274
           L S+H A    Y +   AE G GQV  S ++   DF E  L
Sbjct: 61  LSSQHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYL 101

to top

>TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1|
          Length = 767

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +3

Query: 186 IKRKLAQRSERVKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFE 329
           IK +L   +    +  + P      S    G++ +W+ Q QT+V+ F+
Sbjct: 563 IKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTLVRQFQ 610

to top

>YMM1_CAEEL (P34489) Hypothetical protein K01B6.1|
          Length = 732

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 24/99 (24%), Positives = 42/99 (42%)
 Frame = +2

Query: 56  REAGHPRGSASHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVGEGQVRGS 235
           R  G P    S   +PT+P      RGS+  +LPSR N      Q +  A + + Q + +
Sbjct: 230 RGRGRPMQGRSSPKSPTSPT-QPGRRGSQASSLPSRRNTVS---QNDLLATLQQHQQQQA 285

Query: 236 ASDRAMDFVESLLGECLHLELPNADNGEII*SHRVTGSF 352
           A     +   + L       L N +N  ++ +++   +F
Sbjct: 286 AFHPLRNLRFNPLQSIFPAVLANNNNNSVLATNKHVNNF 324

to top

>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 425

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/68 (20%), Positives = 35/68 (51%)
 Frame = +3

Query: 219 VKSADLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSAKFIARKQWVVAGAD 398
           V S DLHP+   I+S+     V +W+ ++++ V +      P+   + +     +V+ + 
Sbjct: 201 VHSVDLHPSLDLIVSAGRDSVVRVWDIRSRSCVLTLAGHRGPINKVRCLPVDPQIVSCST 260

Query: 399 DMFIRVYN 422
           D  +++++
Sbjct: 261 DATVKLWD 268

to top

>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related|
           transcription factor A) (MRTF-A) (Megakaryoblastic
           leukemia 1 protein) (Megacaryocytic acute leukemia
           protein)
          Length = 931

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +2

Query: 86  SHAPAPTNPLGTSSSRGSRFGALPSRHNAAPVGYQEEARAEVGEGQVRGSASDRAMDFVE 265
           S APAP+  +         FG   S     P GY EEA ++  + Q  GS+S +  D  +
Sbjct: 695 SPAPAPSAQMDLEHPLQPLFGTPTSLLKKEPPGY-EEAMSQQPKQQENGSSSQQMDDLFD 753

Query: 266 SLL 274
            L+
Sbjct: 754 ILI 756

to top

>HAT2_YARLI (Q6C7Q4) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 452

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 210 SERVKSADLHPTEPWILSSLYSGSVC-IW 293
           S R+   D HPT PW+++S    +V  +W
Sbjct: 403 SSRISDFDWHPTLPWVIASAAEDNVIQVW 431


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,956,792
Number of Sequences: 219361
Number of extensions: 885682
Number of successful extensions: 3474
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 3185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3458
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result