>NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (Zinc finger
           C3HC-type protein 1)
          Length = 502

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 303 SLSTNAVGAAMDFSQPSCRPWERGDLLHRLATFKPSTWASKPKAASSLACA 455
           S ++ +V  +    QPS     +     R+ TF    WA KP   S L CA
Sbjct: 53  SATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPPELSPLVCA 103

>TILS_PROMM (Q7V987) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 343

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 30  IPTRSHLTWLWLEPASRPSAPAMREEVRSSSAAPADPP 143
           I  R+ L   WL+ +  PS PA++ E  S S AP  PP
Sbjct: 282 ITARTTLLAYWLKRSGAPSLPAVQLEQISQSIAPGKPP 319

>NIPA_HUMAN (Q86WB0) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (hNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 502

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 303 SLSTNAVGAAMDFSQPSCRPWERGDLLHRLATFKPSTWASKPKAASSLACA 455
           S ++ +V  +    QPS     +     R+ TF    WA KP   S L CA
Sbjct: 53  SATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCA 103

>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1161

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 343 HNHHVDHGNEEIYFIDWPHLSLQHGLLNQRLLVH 444
           H+HH  H  ++ Y   + H + Q  +L Q+ L+H
Sbjct: 488 HHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMH 521

>NIPA_MOUSE (Q80YV2) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (mNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 501

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 384 HRLATFKPSTWASKPKAASSLACA 455
           HR+ TF    WA KP   S L CA
Sbjct: 80  HRVETFSSLKWAGKPPELSPLICA 103

>D1IP_HUMAN (Q9NYX4) D1 dopamine receptor-interacting protein calcyon|
          Length = 217

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 33  PTRSHLTWLWLEPASRPSAPAMREEVRSSSAAPADPP 143
           PT++       EP  +PSA A +E  R ++ + A PP
Sbjct: 179 PTQAGAAAAATEPPGKPSAKAEKEAARKAAGSAAPPP 215


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,888,416
Number of Sequences: 219361
Number of extensions: 829471
Number of successful extensions: 2457
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2451
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)