ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl09d07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL451185.14| Human DNA sequence from clone RP11-136C6 on chromosome 6 Contains the KCNK5 gene for potassium channel subfamily K member 5 (TASK-2) and a CpG island, complete sequence Length = 101841 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 26 tcccctcccctccgcatctcgccactcccc 55 ||||||||||||| |||||| ||||||||| Sbjct: 86719 tcccctcccctccccatctccccactcccc 86748
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 cctggcggcggggcgctcgccg 104 |||||||||||||||||||||| Sbjct: 3206346 cctggcggcggggcgctcgccg 3206325
>gb|AC010388.6| Homo sapiens chromosome 5 clone CTD-2075D11, complete sequence Length = 159766 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 26 tcccctcccctccgcatctcgccactcccc 55 ||||||||||||| |||||| ||||||||| Sbjct: 129229 tcccctcccctccccatctccccactcccc 129258
>gb|AC138151.3| Mus musculus BAC clone RP24-294E11 from 7, complete sequence Length = 203368 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctc 37 ||||||| |||||||||||||||||| Sbjct: 177946 ctccccccccactctcccctcccctc 177971
>gb|AC132425.3| Mus musculus BAC clone RP23-311O15 from 7, complete sequence Length = 160552 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctc 37 ||||||| |||||||||||||||||| Sbjct: 6060 ctccccccccactctcccctcccctc 6085
>gb|AC102396.28| Mus musculus chromosome 3, clone RP24-169F23, complete sequence Length = 137155 Score = 42.1 bits (21), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 aactcccccaccactctcccctccc 34 |||||| |||||||||||||||||| Sbjct: 13111 aactcctccaccactctcccctccc 13087
>gb|AC131665.4| Mus musculus BAC clone RP23-275B16 from chromosome 3, complete sequence Length = 180421 Score = 42.1 bits (21), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 aactcccccaccactctcccctccc 34 |||||| |||||||||||||||||| Sbjct: 25185 aactcctccaccactctcccctccc 25209
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 23 ctctcccctcccctccgcatctcgccactcccc 55 |||||||||||||||| |||||| || |||||| Sbjct: 17333295 ctctcccctcccctccacatctctcctctcccc 17333263 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accactctcccctcccctc 37 ||||||||||||||||||| Sbjct: 8021446 accactctcccctcccctc 8021428
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 42.1 bits (21), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 23 ctctcccctcccctccgcatctcgccactcccc 55 |||||||||||||||| |||||| || |||||| Sbjct: 138420 ctctcccctcccctccacatctctcctctcccc 138388
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 42.1 bits (21), Expect = 0.61 Identities = 30/33 (90%) Strand = Plus / Minus Query: 23 ctctcccctcccctccgcatctcgccactcccc 55 |||||||||||||||| |||||| || |||||| Sbjct: 1519 ctctcccctcccctccacatctctcctctcccc 1487
>gb|AC138671.16| Mus musculus chromosome 5, clone RP23-443N7, complete sequence Length = 196443 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cccccaccactctcccctcccctc 37 |||||||| ||||||||||||||| Sbjct: 60597 cccccacccctctcccctcccctc 60620
>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccc 35 ||||||| |||||||||||||||| Sbjct: 102479 ctccccccccactctcccctcccc 102456
>gb|AC166162.6| Mus musculus BAC clone RP23-436K10 from chromosome 6, complete sequence Length = 181038 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccc 35 ||||||| |||||||||||||||| Sbjct: 102345 ctccccctccactctcccctcccc 102368
>ref|XM_480502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2931 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tgtctccggcgacctccctg 86 |||||||||||||||||||| Sbjct: 1195 tgtctccggcgacctccctg 1176
>ref|XM_527995.1| PREDICTED: Pan troglodytes similar to gammaN-crystallin (LOC472621), mRNA Length = 2328 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccccaccactctcccctccc 34 |||||||||||||||||||| Sbjct: 1925 ccccaccactctcccctccc 1906
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccc 35 |||| ||||||||||||||||||| Sbjct: 32756 ctcctccaccactctcccctcccc 32733
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccc 35 |||| ||||||||||||||||||| Sbjct: 133444 ctcctccaccactctcccctcccc 133421
>gb|AC005996.2| Homo sapiens PAC clone RP4-555L14 from 7, complete sequence Length = 122823 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccccaccactctcccctccc 34 |||||||||||||||||||| Sbjct: 88973 ccccaccactctcccctccc 88954
>gb|AC146169.2| Pan troglodytes BAC clone RP43-1A11 from 7, complete sequence Length = 190018 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccccaccactctcccctccc 34 |||||||||||||||||||| Sbjct: 61851 ccccaccactctcccctccc 61832
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggcggcggggcgctcgccgc 105 |||||||||||||||||||| Sbjct: 28905 ggcggcggggcgctcgccgc 28924
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccc 35 |||| ||||||||||||||||||| Sbjct: 7683511 ctcctccaccactctcccctcccc 7683534
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgtctccggcgacctccctg 86 |||||||||||||||||||| Sbjct: 5461766 tgtctccggcgacctccctg 5461785
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgtctccggcgacctccctg 86 |||||||||||||||||||| Sbjct: 131577 tgtctccggcgacctccctg 131596
>gb|AC007375.6|AC007375 Homo sapiens chromosome 14 clone RP11-463C8 containing POMT2 gene, partial cds; and unknown genes, complete sequence Length = 180331 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccactctcccctcccctc 37 |||||||||||||||||||| Sbjct: 9027 caccactctcccctcccctc 9046
>gb|AE005094.1| Halobacterium sp. NRC-1 section 125 of 170 of the complete genome Length = 15065 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ctggcggcggggcgctcgcc 103 |||||||||||||||||||| Sbjct: 11095 ctggcggcggggcgctcgcc 11076
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ggcggcggggcgctcgccgcatgg 109 ||||||| |||||||||||||||| Sbjct: 2610936 ggcggcgcggcgctcgccgcatgg 2610913
>gb|AC117640.14| Mus musculus chromosome 5, clone RP23-228I1, complete sequence Length = 138354 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 cccccaccactctcccctcccctc 37 |||||||| ||||||||||||||| Sbjct: 136427 cccccacccctctcccctcccctc 136404
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccc 35 |||| ||||||||||||||||||| Sbjct: 7753598 ctcctccaccactctcccctcccc 7753621
>ref|XM_511723.1| PREDICTED: Pan troglodytes acid alpha-glucosidase (LOC454940), mRNA Length = 2373 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 588 tggaggagtagccccagcg 570
>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence Length = 227709 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 133 ccactctcccctcccctcc 151
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 ctccctggcggcggggcgc 98 ||||||||||||||||||| Sbjct: 63405 ctccctggcggcggggcgc 63387 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 ctccctggcggcggggcgc 98 ||||||||||||||||||| Sbjct: 44921 ctccctggcggcggggcgc 44903
>gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, complete sequence Length = 169209 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tcccccaccactctcccct 31 ||||||||||||||||||| Sbjct: 137028 tcccccaccactctcccct 137010
>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence Length = 222363 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 20224 ctccccctcccctctcccctcccctcc 20250
>gb|AC113060.11| Mus musculus chromosome 13, clone RP23-255E18, complete sequence Length = 192264 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 34159 ccactctcccctcccctcc 34177
>ref|XM_868743.1| PREDICTED: Bos taurus similar to MutS protein homolog 4 (LOC616664), partial mRNA Length = 1271 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 ctatctggcacagttccag 189 ||||||||||||||||||| Sbjct: 861 ctatctggcacagttccag 843
>ref|XM_615845.2| PREDICTED: Bos taurus similar to CG31122-PA (LOC535735), partial mRNA Length = 1478 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 140 ttgcccctgggccggctgc 158 ||||||||||||||||||| Sbjct: 178 ttgcccctgggccggctgc 196
>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence Length = 220762 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||||||| | ||||||||||||| Sbjct: 118010 ctcccccaccagtgtcccctcccctcc 117984
>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete sequence Length = 161457 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 42816 ccactctcccctcccctcc 42834
>gb|AC183342.3| Oryctolagus cuniculus clone LB1-302N24, complete sequence Length = 34148 Score = 38.2 bits (19), Expect = 9.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 25 ctcccctcccctccgcatctcgccactcccc 55 |||||||||||||| |||||| || |||||| Sbjct: 22920 ctcccctcccctccccatctctcccctcccc 22890
>gb|BC016468.1| Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3, mRNA (cDNA clone MGC:18360 IMAGE:4196583), complete cds Length = 1502 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 1338 ccactctcccctcccctcc 1320
>ref|XM_595552.2| PREDICTED: Bos taurus similar to G protein-regulated inducer of neurite outgrowth 1 (LOC517383), mRNA Length = 3141 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 tggcggcggggcgctcgcc 103 ||||||||||||||||||| Sbjct: 2523 tggcggcggggcgctcgcc 2505
>ref|NM_007703.1| Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 (Elovl3), mRNA Length = 1878 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 1343 ccactctcccctcccctcc 1325
>gb|AC157930.7| Mus musculus chromosome 5, clone RP24-151E22, complete sequence Length = 146346 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 140347 ctccccctcccctctcccctcccctcc 140321
>gb|AC113176.8| Mus musculus chromosome 3, clone RP23-453A2, complete sequence Length = 217606 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tcccccaccactctcccct 31 ||||||||||||||||||| Sbjct: 202611 tcccccaccactctcccct 202629
>gb|AY251054.1| Anthurium andraeanum cysteine protease mRNA, complete cds Length = 1814 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccactctcccctcccc 35 ||||||||||||||||||| Sbjct: 536 ccaccactctcccctcccc 518
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccc 30 ||||||||||||||||||| Sbjct: 77933 ctcccccaccactctcccc 77915
>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence Length = 197574 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 30826 ccactctcccctcccctcc 30808
>ref|XM_980707.1| PREDICTED: Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 (Elovl3), mRNA Length = 1948 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 1130 ccactctcccctcccctcc 1112
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 162380 ccactctcccctcccctcc 162362
>emb|CR450793.12| Zebrafish DNA sequence from clone DKEY-48M5 in linkage group 10, complete sequence Length = 130542 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 99636 cccctcccctccgcatctc 99618
>gb|AC132291.3| Mus musculus BAC clone RP24-319I23 from chromosome 15, complete sequence Length = 164224 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| ||| ||||||||||||||| Sbjct: 67519 ctccccctccattctcccctcccctcc 67493
>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence Length = 221548 Score = 38.2 bits (19), Expect = 9.5 Identities = 26/27 (96%), Gaps = 1/27 (3%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 |||||||||| |||||||||||||||| Sbjct: 97383 ctcccccacc-ctctcccctcccctcc 97358
>gb|AC122885.4| Mus musculus BAC clone RP23-90H14 from chromosome 14, complete sequence Length = 186387 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 accactctcccctcccctc 37 ||||||||||||||||||| Sbjct: 28087 accactctcccctcccctc 28105
>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence Length = 201282 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 91411 ctccccctcccctctcccctcccctcc 91385
>gb|AC002039.1|HUAC002039 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-13F4 ~complete genomic sequence, complete sequence Length = 127485 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 32315 ccactctcccctcccctcc 32333
>emb|CR354389.15| Zebrafish DNA sequence from clone CH211-220J14 in linkage group 8, complete sequence Length = 123378 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccactctcccctcccc 35 ||||||||||||||||||| Sbjct: 97849 ccaccactctcccctcccc 97831
>gb|AC121824.2| Mus musculus BAC clone RP23-467P15 from 18, complete sequence Length = 195027 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 33185 ctccccctcccctctcccctcccctcc 33159
>gb|BC040431.1| Homo sapiens glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II), mRNA (cDNA clone MGC:48746 IMAGE:5739991), complete cds Length = 3687 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1285 tggaggagtagccccagcg 1267
>emb|CR589944.10| Zebrafish DNA sequence from clone CH211-14I3 in linkage group 11, complete sequence Length = 157142 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 1088 cccctcccctccgcatctc 1106
>emb|BX908382.8| Human DNA sequence from clone WI2-87105E3 on chromosome X Contains the 5' end of the CRLF2 gene for cytokine receptor-like factor 2, complete sequence Length = 33657 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 17773 ctccccctcccctctcccctcccctcc 17799
>emb|AL513011.7| Human DNA sequence from clone RP11-284O5 on chromosome 6, complete sequence Length = 157204 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 cccaccactctcccctccc 34 ||||||||||||||||||| Sbjct: 73539 cccaccactctcccctccc 73557
>emb|AL392166.19| Human DNA sequence from clone RP11-758J17 on chromosome 6 Contains the 3' end of the IMPG1 gene for interphotoreceptor matrix proteoglycan 1, complete sequence Length = 90766 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 86008 ccactctcccctcccctcc 86026
>emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chromosome 1, complete sequence Length = 106769 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 cccaccactctcccctcccctcc 38 ||||||||||||||||| ||||| Sbjct: 26520 cccaccactctcccctctcctcc 26542 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 cccaccactctcccctcccctcc 38 ||||||||||||||||| ||||| Sbjct: 26014 cccaccactctcccctctcctcc 26036
>emb|AL356389.20| Human DNA sequence from clone RP11-352P4 on chromosome 1 Contains the 3' end of the gene for maba1 (KIAA1324) and the SARS gene for seryl-tRNA synthetase, complete sequence Length = 97114 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 62163 ccactctcccctcccctcc 62181
>emb|AL139342.7| Human DNA sequence from clone RP5-1016N21 on chromosome 1q42.13-43 Contains the 5' end of a novel gene (FLJ11383), complete sequence Length = 151553 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccc 30 ||||||||||||||||||| Sbjct: 41469 ctcccccaccactctcccc 41451
>gb|AC139256.5| Homo sapiens chromosome 16 clone RP11-1186N24, complete sequence Length = 143783 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 22173 ccactctcccctcccctcc 22191
>gb|BC061753.1| Rattus norvegicus glucosidase, alpha, acid, mRNA (cDNA clone MGC:72625 IMAGE:5599964), complete cds Length = 3408 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1311 tggaggagtagccccagcg 1293
>gb|AC032019.7| Homo sapiens chromosome 17, clone RP11-277J6, complete sequence Length = 172709 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 ctctcccctcccctccgca 41 ||||||||||||||||||| Sbjct: 120588 ctctcccctcccctccgca 120606
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ggcggcggggcgctcgccg 104 ||||||||||||||||||| Sbjct: 145740 ggcggcggggcgctcgccg 145758
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 ggcggcggggcgctcgccg 104 ||||||||||||||||||| Sbjct: 146549 ggcggcggggcgctcgccg 146531
>emb|BX294023.1|NCB20D17 Neurospora crassa DNA linkage group V BAC clone B20D17 Length = 71593 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ccccaccactctcccctcc 33 ||||||||||||||||||| Sbjct: 57603 ccccaccactctcccctcc 57621
>emb|AL627383.5| Zebrafish DNA sequence from clone RP71-1O18 in linkage group 14 Contains a novel gene similar to GRIA3 (ionotrophic glutamate receptor AMPA 3), a novel gene similar to THOC2 (THO complex 2) and two CpG islands, complete sequence Length = 166395 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 132833 cccctcccctccgcatctc 132815
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ctcccctcccctccgcatctcgc 47 |||||||||||||| |||||||| Sbjct: 130107 ctcccctcccctccccatctcgc 130129
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 actcccccaccactctcccctcc 33 ||||| ||||||||||||||||| Sbjct: 2637 actccaccaccactctcccctcc 2615
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ctcccctcccctccgcatctcgc 47 |||||||||||||| |||||||| Sbjct: 49490 ctcccctcccctccccatctcgc 49512
>emb|CR318587.6| Zebrafish DNA sequence from clone CH211-171B20 in linkage group 24, complete sequence Length = 164331 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 42533 cccctcccctccgcatctc 42515
>emb|BX571762.15| Zebrafish DNA sequence from clone CH211-214G1 in linkage group 15, complete sequence Length = 138829 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 119298 cccctcccctccgcatctc 119280
>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8, complete sequence Length = 219913 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 147920 cccctcccctccgcatctc 147938
>emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 in linkage group 25, complete sequence Length = 204383 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 158653 cccctcccctccgcatctc 158671
>gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160943 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tcccccaccactctcccct 31 ||||||||||||||||||| Sbjct: 3398 tcccccaccactctcccct 3380
>emb|BX936318.10| Zebrafish DNA sequence from clone CH211-229O17 in linkage group 13, complete sequence Length = 158912 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 106267 cccctcccctccgcatctc 106249
>emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in linkage group 4 Contains part of the gene for a novel protein similar to vertebrate atrophin-1 interacting protein (AIP1) and a CpG island, complete sequence Length = 263517 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 116566 cccctcccctccgcatctc 116584
>emb|CR860209.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2419 (from clone DKFZp469P2419) Length = 3559 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1281 tggaggagtagccccagcg 1263
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1, complete sequence Length = 104059 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 67900 cccctcccctccgcatctc 67882
>dbj|AB192509.2| Sus scrofa genomic DNA, chromosome 7, BAC clone: L139G16, complete sequence Length = 157870 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ctctcccctcccctccgca 41 ||||||||||||||||||| Sbjct: 66962 ctctcccctcccctccgca 66944
>gb|L39891.1|HUMPKD1GEN Homo sapiens polycystic kidney disease-associated protein (PKD1) gene, complete cds Length = 53522 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 34217 ccactctcccctcccctcc 34235
>gb|U24498.1|HSU24498 Human autosomal dominant polycystic kidney disease protein 1 (PKD1) gene Length = 47934 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 30887 ccactctcccctcccctcc 30905
>ref|NM_199118.1| Rattus norvegicus glucosidase, alpha, acid (Gaa), mRNA Length = 3408 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1311 tggaggagtagccccagcg 1293
>gb|AC018563.7| Homo sapiens, clone RP11-122D10, complete sequence Length = 174691 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 53503 ctccccctcccctctcccctcccctcc 53529
>dbj|AK162271.1| Mus musculus adult male eyeball cDNA, RIKEN full-length enriched library, clone:7530414K18 product:elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3, full insert sequence Length = 836 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 693 ccactctcccctcccctcc 675
>emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in linkage group 6, complete sequence Length = 216068 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 55319 cccctcccctccgcatctc 55301
>emb|BX005418.11| Zebrafish DNA sequence from clone CH211-284C3, complete sequence Length = 156060 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 127749 cccctcccctccgcatctc 127767
>gb|AC092371.3| Homo sapiens chromosome 16 clone RP11-525J10, complete sequence Length = 171100 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 136430 ccactctcccctcccctcc 136448
>dbj|AK051578.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130058E05 product:gastrulation brain homeobox 2, full insert sequence Length = 3037 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||||||| | ||||||||||||| Sbjct: 2507 ctcccccaccagtgtcccctcccctcc 2533
>ref|NG_002795.1| Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 2 (PKD1P2) on chromosome 16 Length = 21484 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 14443 ccactctcccctcccctcc 14461
>ref|NG_002796.2| Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 3 (PKD1P3) on chromosome 16 Length = 24432 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 16251 ccactctcccctcccctcc 16269
>ref|NG_002798.1| Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 5 (PKD1P5) on chromosome 16 Length = 27694 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 20500 ccactctcccctcccctcc 20518
>ref|NG_002797.1| Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 1 (PKD1P1) on chromosome 16 Length = 24264 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 16247 ccactctcccctcccctcc 16265
>ref|NG_002800.1| Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 4 (PKD1P4) on chromosome 16 Length = 18277 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 10188 ccactctcccctcccctcc 10206
>ref|NG_002799.1| Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 6 (PKD1P6) on chromosome 16 Length = 29487 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 22173 ccactctcccctcccctcc 22191
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ctcccctcccctccgcatctcgc 47 |||||||||||||| |||||||| Sbjct: 130225 ctcccctcccctccccatctcgc 130247
>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence Length = 215022 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 157035 ccactctcccctcccctcc 157053
>gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1, complete sequence Length = 190744 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 cccaccactctcccctcccctcc 38 ||||||||||||||||| ||||| Sbjct: 184818 cccaccactctcccctctcctcc 184796 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 cccaccactctcccctcccctcc 38 ||||||||||||||||| ||||| Sbjct: 184312 cccaccactctcccctctcctcc 184290
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 actcccccaccactctcccctcc 33 ||||| ||||||||||||||||| Sbjct: 33951740 actccaccaccactctcccctcc 33951718 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ctcccctcccctccgcatctcgc 47 |||||||||||||| |||||||| Sbjct: 33699047 ctcccctcccctccccatctcgc 33699069
>gb|AC138969.2| Homo sapiens chromosome 16 clone RP11-958N24, complete sequence Length = 216759 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 63128 ccactctcccctcccctcc 63110 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 18840 ccactctcccctcccctcc 18822
>gb|AC138932.4| Homo sapiens chromosome 16 clone RP11-680G24, complete sequence Length = 180798 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 111540 ccactctcccctcccctcc 111522
>gb|AC126755.3| Homo sapiens chromosome 16 clone RP11-1212A22, complete sequence Length = 223432 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 94098 ccactctcccctcccctcc 94116 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 54872 ccactctcccctcccctcc 54890
>gb|AC092137.3| Homo sapiens chromosome 16 clone RP11-344H15, complete sequence Length = 184891 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 94156 ccactctcccctcccctcc 94138
>gb|AC010488.7| Homo sapiens chromosome 16 clone CTD-2332D4, complete sequence Length = 109340 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 26198 ccactctcccctcccctcc 26180
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 actcccccaccactctcccctcc 33 ||||||||||| ||||||||||| Sbjct: 18499852 actcccccacctctctcccctcc 18499830
>emb|BX005006.10| Zebrafish DNA sequence from clone DKEY-47K14, complete sequence Length = 232594 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 96344 cccctcccctccgcatctc 96362
>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence Length = 233117 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 34108 ccactctcccctcccctcc 34126
>gb|AC092136.3| Homo sapiens chromosome 16 clone RP11-299F9, complete sequence Length = 173548 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 122475 ccactctcccctcccctcc 122493
>gb|AC136427.3| Homo sapiens chromosome 16 clone RP11-103G5, complete sequence Length = 145971 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 76713 ccactctcccctcccctcc 76695
>gb|AC009065.8| Homo sapiens chromosome 16 clone RP11-304L19, complete sequence Length = 199759 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 172355 ccactctcccctcccctcc 172373
>gb|AC004801.2| Homo sapiens 12 PAC RP1-228P16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 193775 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tcccccaccactctcccct 31 ||||||||||||||||||| Sbjct: 99906 tcccccaccactctcccct 99924
>gb|AC087741.18| Homo sapiens chromosome 17, clone RP11-334C17, complete sequence Length = 182016 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 101619 tggaggagtagccccagcg 101637
>gb|AC167566.1| Mus musculus BAC clone RP24-84B10 from chromosome 14, complete sequence Length = 187792 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 accactctcccctcccctc 37 ||||||||||||||||||| Sbjct: 160407 accactctcccctcccctc 160425
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1003B09 Length = 155263 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 actcccccaccactctcccctcc 33 ||||||||||| ||||||||||| Sbjct: 123610 actcccccacctctctcccctcc 123588
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1168H06 Length = 185600 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 actcccccaccactctcccctcc 33 ||||||||||| ||||||||||| Sbjct: 99069 actcccccacctctctcccctcc 99047
>emb|BX255969.8| Zebrafish DNA sequence from clone DKEY-67M7 in linkage group 11, complete sequence Length = 155717 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 12808 cccctcccctccgcatctc 12826
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accactctcccctcccctc 37 ||||||||||||||||||| Sbjct: 59643 accactctcccctcccctc 59625
>emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in linkage group 2, complete sequence Length = 158932 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 100262 cccctcccctccgcatctc 100244
>emb|BX005182.13| Zebrafish DNA sequence from clone CH211-279M23 in linkage group 23, complete sequence Length = 155920 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 113811 cccctcccctccgcatctc 113829
>emb|BX294653.11| Zebrafish DNA sequence from clone CH211-196H24 in linkage group 20, complete sequence Length = 208836 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 55093 cccctcccctccgcatctc 55111
>emb|BX005466.8| Zebrafish DNA sequence from clone CH211-117C9 in linkage group 23, complete sequence Length = 158916 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 148530 cccctcccctccgcatctc 148548
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accactctcccctcccctc 37 ||||||||||||||||||| Sbjct: 137805 accactctcccctcccctc 137787
>gb|AF054504.1|AF054504 Mus musculus membrane glycoprotein (Cig30) gene, complete cds Length = 13869 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 10416 ccactctcccctcccctcc 10398
>emb|CR925718.11| Zebrafish DNA sequence from clone CH211-287A22 in linkage group 20, complete sequence Length = 151300 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 67953 cccctcccctccgcatctc 67935
>emb|BX927224.10| Zebrafish DNA sequence from clone CH211-278C2 in linkage group 19, complete sequence Length = 79151 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 73899 cccctcccctccgcatctc 73917
>emb|AL845330.16| Zebrafish DNA sequence from clone DKEY-286J15 in linkage group 22, complete sequence Length = 175991 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 ctctcccctcccctccgcatctc 45 ||||||||||||| ||||||||| Sbjct: 74671 ctctcccctccccaccgcatctc 74649
>gb|AY919043.1| Homo sapiens truncated REV1-like (yeast) (REV1L) gene, complete cds Length = 93047 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 87737 ccactctcccctcccctcc 87719
>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete sequence Length = 189879 Score = 38.2 bits (19), Expect = 9.5 Identities = 28/31 (90%) Strand = Plus / Plus Query: 3 caaactcaactcccccaccactctcccctcc 33 ||||||||||||||| |||||| ||||||| Sbjct: 50946 caaactcaactcccctgccactcacccctcc 50976
>gb|AY103737.1| Zea mays PCO126068 mRNA sequence Length = 1045 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ctcccctcccctccgcatctcgc 47 |||||||||||||| |||||||| Sbjct: 39 ctcccctcccctccccatctcgc 61
>emb|CR925738.6| Zebrafish DNA sequence from clone DKEY-164G12 in linkage group 10, complete sequence Length = 155003 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 91120 cccctcccctccgcatctc 91138
>gb|AC007016.5|AC007016 Homo sapiens chromosome 4 clone C0478G20 map 4p16, complete sequence Length = 172568 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 cccaccactctcccctcccctcc 38 |||||||||||| |||||||||| Sbjct: 6374 cccaccactctcacctcccctcc 6396
>emb|X55083.1|HSGAA7 Human lysosomal alpha-glucosidase gene exon 7 Length = 135 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 76 tggaggagtagccccagcg 58
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gccggctgcggccatggcc 168 ||||||||||||||||||| Sbjct: 5942410 gccggctgcggccatggcc 5942392
>ref|NM_000152.2| Homo sapiens glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) (GAA), mRNA Length = 3846 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1582 tggaggagtagccccagcg 1564
>emb|AL844179.12| Zebrafish DNA sequence from clone DKEY-218M22, complete sequence Length = 182105 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccactctcccctcccc 35 ||||||||||||||||||| Sbjct: 156922 ccaccactctcccctcccc 156904
>gb|AC116886.6| Mus musculus chromosome 5, clone RP24-441G10, complete sequence Length = 168069 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| ||||| ||||||||||||| Sbjct: 79245 ctccccctccactttcccctcccctcc 79271
>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence Length = 153629 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 cccccaccactctcccctcccct 36 ||||||| ||||||||||||||| Sbjct: 106609 cccccacaactctcccctcccct 106587
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 34225 ctccccctcccctctcccctcccctcc 34199
>gb|U97107.1|MMU97107 Mus musculus membrane glycoprotein CIG30 (Cig30) mRNA, complete cds Length = 1878 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccactctcccctcccctcc 38 ||||||||||||||||||| Sbjct: 1343 ccactctcccctcccctcc 1325
>gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromosome unknown, complete sequence Length = 209915 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccactctcccctcccc 35 ||||||||||||||||||| Sbjct: 37951 ccaccactctcccctcccc 37933
>emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on chromosome 2, complete sequence Length = 206806 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 28350 ctccccctcccctctcccctcccctcc 28376 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 28250 ctccccctcccctctcccctcccctcc 28276
>gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, complete sequence Length = 233632 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 ctctcccctcccctccgcatctc 45 |||||||||||||||| |||||| Sbjct: 148744 ctctcccctcccctccccatctc 148722
>gb|AC112976.8| Mus musculus chromosome 7, clone RP24-475E2, complete sequence Length = 167823 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 ctcccccaccactctcccc 30 ||||||||||||||||||| Sbjct: 47178 ctcccccaccactctcccc 47160
>emb|AL831752.7| Mouse DNA sequence from clone RP23-414J22 on chromosome X, complete sequence Length = 169807 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cccctcccctccgcatctc 45 ||||||||||||||||||| Sbjct: 134774 cccctcccctccgcatctc 134792
>emb|AL805951.6| Mouse DNA sequence from clone RP23-326P3 on chromosome 4, complete sequence Length = 197080 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 acctccctggcggcggggc 96 ||||||||||||||||||| Sbjct: 38423 acctccctggcggcggggc 38405
>gb|M34424.1|HUMGAAA Human acid alpha-glucosidase (GAA) mRNA, complete cds Length = 3441 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1173 tggaggagtagccccagcg 1155
>emb|Y00839.1|HSGAA H.sapiens GAA mRNA for lysosomal alpha-glucosidase (acid maltase) Length = 3624 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tggaggagtagccccagcg 125 ||||||||||||||||||| Sbjct: 1360 tggaggagtagccccagcg 1342
>dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-402K1, complete sequence Length = 187735 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 12 ctcccccaccactctcccctcccctcc 38 ||||||| || |||||||||||||||| Sbjct: 126887 ctccccctcccctctcccctcccctcc 126913 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,554,762 Number of Sequences: 3902068 Number of extensions: 1554762 Number of successful extensions: 185609 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 184114 Number of HSP's gapped (non-prelim): 1496 length of query: 192 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 170 effective length of database: 17,147,199,772 effective search space: 2915023961240 effective search space used: 2915023961240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
