Clone Name | bastl09d03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AHM3_ARATH (Q9SZW4) Putative cadmium/zinc-transporting ATPase 3 ... | 66 | 4e-11 | 2 | AHM2_ARATH (O64474) Putative cadmium/zinc-transporting ATPase 2 ... | 66 | 4e-11 | 3 | AHM4_ARATH (Q9SZW5) Putative cadmium/zinc-transporting ATPase 4 ... | 65 | 8e-11 | 4 | SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal t... | 29 | 4.6 |
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>AHM3_ARATH (Q9SZW4) Putative cadmium/zinc-transporting ATPase 3 (EC 3.6.3.3)| (EC 3.6.3.5) Length = 951 Score = 65.9 bits (159), Expect = 4e-11 Identities = 36/89 (40%), Positives = 45/89 (50%) Frame = +1 Query: 136 KLEKSYFDVLGICCPSXXXXXXXXXXXXAGXXXXXXXXXXXXXXXLHDAAAISQAQIVRA 315 K+ KSYFDVLGICC S G +HD +SQ QIV+A Sbjct: 5 KMTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQIVKA 64 Query: 316 LNGARLEASVRAYGGAGQSKVTNXWPSPY 402 LN A+LEA+VR G++ N WPSP+ Sbjct: 65 LNQAQLEANVRV---TGETNFKNKWPSPF 90
>AHM2_ARATH (O64474) Putative cadmium/zinc-transporting ATPase 2 (EC 3.6.3.3)| (EC 3.6.3.5) Length = 1172 Score = 65.9 bits (159), Expect = 4e-11 Identities = 37/89 (41%), Positives = 45/89 (50%) Frame = +1 Query: 136 KLEKSYFDVLGICCPSXXXXXXXXXXXXAGXXXXXXXXXXXXXXXLHDAAAISQAQIVRA 315 KL+KSYFDVLGICC S G +HD+ IS QI +A Sbjct: 15 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKA 74 Query: 316 LNGARLEASVRAYGGAGQSKVTNXWPSPY 402 LN ARLEA+VR G++ N WPSP+ Sbjct: 75 LNEARLEANVRV---NGETSFKNKWPSPF 100
>AHM4_ARATH (Q9SZW5) Putative cadmium/zinc-transporting ATPase 4 (EC 3.6.3.3)| (EC 3.6.3.5) Length = 760 Score = 65.1 bits (157), Expect = 8e-11 Identities = 36/88 (40%), Positives = 45/88 (51%) Frame = +1 Query: 139 LEKSYFDVLGICCPSXXXXXXXXXXXXAGXXXXXXXXXXXXXXXLHDAAAISQAQIVRAL 318 L+ SYFDV+GICC S G +HD IS QIV+AL Sbjct: 12 LQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTFLISPLQIVKAL 71 Query: 319 NGARLEASVRAYGGAGQSKVTNXWPSPY 402 N ARLEASVR Y G++ + + WPSP+ Sbjct: 72 NQARLEASVRPY---GETSLKSQWPSPF 96
>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68) Length = 443 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +3 Query: 66 ASPSVILHPSAPSVILHPPGGGG 134 A PSV L PS PS + H P GGG Sbjct: 26 AHPSVRLTPSRPSPLPHRPRGGG 48 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,740,387 Number of Sequences: 219361 Number of extensions: 410284 Number of successful extensions: 1686 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1680 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)