>ALMS1_MOUSE (Q8K4E0) Alstrom syndrome protein 1 homolog|
          Length = 3251

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 156  SYHHGCFRCLFLSPPQPLNCHFSFLSI 76
            S+  GCFR L    P+P +CH +F S+
Sbjct: 1737 SHEKGCFRTLTAEQPRPDSCHCAFRSV 1763

>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
 Frame = -3

Query: 437  SCPIALLTRRASRPLKTWPPVCSRL----PSGFAPV---GWIFSSGEAKTGLLPL*STID 279
            + P +  +  ASR  K+WPPV SR     P  F P+     + SS  + +G+ P   T D
Sbjct: 3625 AAPSSSASPHASR--KSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMPTDD 3682

Query: 278  SDFQNPTCLSVGTRSSEKNDDDESGGGPPNEDRCP 174
               ++ T L      S+K+D   S    P +  CP
Sbjct: 3683 YSEESDTDL------SQKSDGPASPVEGPKDPSCP 3711

>MURD_SYNP6 (Q5MZA8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 463

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +1

Query: 235 DLVPTERQVGFWKSESMVDQRGSKPVFASPLEKIHPTG-ANPEGSLEQTGGQVFKGLDAL 411
           + +PT R  GFW  E  V  RG +     P+E+    G  N +  L         G++A 
Sbjct: 250 EALPTSRDRGFWIEEGWVIDRGDR---LFPVERFSMVGNHNQQNLLMAVAAARLAGIEAE 306

Query: 412 RVSKAM 429
            +++AM
Sbjct: 307 AIAEAM 312

>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 464

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 186 GQVSPVNHSGSYHHGCFRCLFLSPPQPLNC 97
           GQ++  NH+G     C+RCLF +PP    C
Sbjct: 219 GQLTVYNHNGG---PCYRCLFPTPPPTSAC 245

>YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor|
          Length = 250

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 236 SSEKNDDDESGGGPPNEDRCPLSIT 162
           S E +DDD+   GP NE   PL +T
Sbjct: 128 SDENDDDDDDDEGPSNESSIPLVVT 152

>ELHA_APLCA (P01360) Atrial gland peptide A precursor (ELH-18) [Contains:|
           Atrial gland peptide A; Califin A; Califin A large
           subunit; Califin A small subunit]
          Length = 173

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 298 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 387
           G++P F +P  + +P G    G +EQ+ GQ
Sbjct: 54  GAQPYFMTPRLRFYPIGKRAAGEMEQSEGQ 83

>ELHL_APLCA (P01361) Atrial gland peptide B precursor (ELH-1L)|
          Length = 122

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 298 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 387
           G++P F +P  + +P G    G +EQ+ GQ
Sbjct: 54  GAQPYFMTPRLRFYPIGKRAAGGMEQSEGQ 83

>HUNB_DROMM (O46248) Protein hunchback (Fragments)|
          Length = 158

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = -1

Query: 358 QDLLPSDGSSQVEKQKLACSLSDPPL-TPISRTQPASLWGQGLRRRTTTTSLAVGRRTRT 182
           Q  LP+    Q  KQ+    L  P L  P+    PA++      R TTTT+ A    T  
Sbjct: 46  QSPLPNLQLEQYLKQQQQQPLMPPGLPNPMQTIMPANMRPSPTARTTTTTAAAAPTTTAA 105

Query: 181 GVPCQSLRKLSPWVLSLPLSFT 116
            +  Q+  KL    L+ P+  T
Sbjct: 106 AIAMQANDKLQ--ALTPPMDVT 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,557,397
Number of Sequences: 219361
Number of extensions: 1301362
Number of successful extensions: 3911
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3907
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)