ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl09c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds 682 0.0
2dbj|AB244278.1| Oryza sativa (japonica cultivar-group) OML3 mRNA... 129 9e-27
3dbj|AK121634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
4dbj|AK120322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
5dbj|AK074004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
6gb|AY579890.1| Hordeum vulgare AML6 gene, partial cds 76 1e-10
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
8gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
9gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
10gb|AY579885.1| Sorghum bicolor AML1 mRNA, complete cds 66 1e-07
11gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, co... 46 0.100
12gb|AC155304.4| Mus musculus BAC clone RP24-212I6 from chromosome... 46 0.100
13gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, com... 46 0.100
14ref|NM_142205.2| Drosophila melanogaster CG6130-RA (CG6130), mRNA 46 0.100
15gb|AC175195.2| Sporobolomyces roseus clone JGIBAIF-17H21, comple... 46 0.100
16gb|AY051426.1| Drosophila melanogaster GH10346 full length cDNA 46 0.100
17gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, r... 46 0.100
18gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, r... 46 0.100
19gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46... 46 0.100
20ref|NM_179270.1| Arabidopsis thaliana DNA binding AT1G06230 tran... 44 0.39
21ref|NM_100505.2| Arabidopsis thaliana DNA binding AT1G06230 tran... 44 0.39
22gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, co... 44 0.39
23emb|CR731558.2|CNS0GREZ Tetraodon nigroviridis full-length cDNA 44 0.39
24emb|CR728100.2|CNS0GOQY Tetraodon nigroviridis full-length cDNA 44 0.39
25emb|CR683307.2|CNS0FQ6V Tetraodon nigroviridis full-length cDNA 44 0.39
26gb|BC033353.1| Homo sapiens cDNA clone IMAGE:4828937 44 0.39
27emb|BX816821.1|CNS0AEK3 Arabidopsis thaliana Full-length cDNA Co... 44 0.39
28gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 44 0.39
29gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thali... 44 0.39
30gb|AY391468.1| Danio rerio tubulin, alpha 2 (TUBA2) mRNA, comple... 42 1.6
31gb|BC067582.1| Danio rerio tubulin, alpha 8 like, mRNA (cDNA clo... 42 1.6
32gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, c... 42 1.6
33gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, co... 42 1.6
34gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 42 1.6
35emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chr... 42 1.6
36emb|CR858028.1| Pongo pygmaeus mRNA; cDNA DKFZp469L1915 (from cl... 42 1.6
37emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 i... 42 1.6
38gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, comp... 42 1.6
39ref|NM_212772.1| Danio rerio tubulin, alpha 8 like (tuba8l), mRNA 42 1.6
40dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 1.6
41dbj|AB014577.1| Homo sapiens mRNA for KIAA0677 protein, partial cds 42 1.6
42gb|AF169288.1|AF169288 Mus musculus beta-sarcoglycan gene, compl... 42 1.6
43gb|BC002558.2| Homo sapiens jumonji domain containing 2A, mRNA (... 42 1.6
44ref|NM_014663.1| Homo sapiens jumonji domain containing 2A (JMJD... 42 1.6
45gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, comple... 42 1.6
46gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, co... 40 6.2
47ref|NM_128557.2| Arabidopsis thaliana catalytic/ protein phospha... 40 6.2
48ref|XM_514528.1| PREDICTED: Pan troglodytes sorting nexin 5 (LOC... 40 6.2
49ref|XM_513098.1| PREDICTED: Pan troglodytes similar to Jumonji d... 40 6.2
50gb|AY255687.1| Falco columbarius arylalkylamine N-acetyltransfer... 40 6.2
51gb|AY255686.1| Falco peregrinus arylalkylamine N-acetyltransfera... 40 6.2
52gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence 40 6.2
53ref|NM_001034853.1| Homo sapiens retinitis pigmentosa GTPase reg... 40 6.2
54gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosom... 40 6.2
55gb|BT012471.1| Drosophila melanogaster RE24802 full insert cDNA 40 6.2
56gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, compl... 40 6.2
57gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome ... 40 6.2
58gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome... 40 6.2
59gb|BT011364.1| Drosophila melanogaster RE66627 full insert cDNA 40 6.2
60gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome... 40 6.2
61gb|BC063252.1| Mus musculus myelin transcription factor 1, mRNA ... 40 6.2
62gb|AC134535.4| Mus musculus BAC clone RP24-371E20 from chromosom... 40 6.2
63gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, comple... 40 6.2
64gb|AC139154.3| Mus musculus chromosome 7 clone RP24-356B8, compl... 40 6.2
65emb|BX323043.5| Human DNA sequence from clone CTD-2510L9 on chro... 40 6.2
66emb|AL606748.9| Human DNA sequence from clone RP13-43E11 on chro... 40 6.2
67gb|AF133280.1|AF133277S5 Mus musculus B-cell leukemia/lymphoma x... 40 6.2
68gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatibli... 40 6.2
69emb|AJ318463.1|HSA318463 Homo sapiens RPGR gene for retinitis pi... 40 6.2
70gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, comp... 40 6.2
71gb|AY119555.1| Drosophila melanogaster GH28665 full insert cDNA 40 6.2
72dbj|AK126916.1| Homo sapiens cDNA FLJ44968 fis, clone BRAWH2016562 40 6.2
73ref|NM_206314.1| Drosophila melanogaster CG8177-RH, transcript v... 40 6.2
74ref|NM_206313.1| Drosophila melanogaster CG8177-RI, transcript v... 40 6.2
75ref|NM_206312.1| Drosophila melanogaster CG8177-RJ, transcript v... 40 6.2
76ref|NM_206311.1| Drosophila melanogaster CG8177-RK, transcript v... 40 6.2
77gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, compl... 40 6.2
78gb|AC007920.18| Homo sapiens 3 BAC RP11-208N14 (Roswell Park Can... 40 6.2
79ref|NM_168374.1| Drosophila melanogaster CG8177-RD, transcript v... 40 6.2
80ref|NM_168373.1| Drosophila melanogaster CG8177-RE, transcript v... 40 6.2
81ref|NM_168372.1| Drosophila melanogaster CG8177-RF, transcript v... 40 6.2
82ref|NM_168371.1| Drosophila melanogaster CG8177-RC, transcript v... 40 6.2
83ref|NM_168370.1| Drosophila melanogaster CG8177-RB, transcript v... 40 6.2
84ref|NM_168369.1| Drosophila melanogaster CG8177-RG, transcript v... 40 6.2
85gb|AC079015.8| Homo sapiens chromosome 8, clone RP11-489O18, com... 40 6.2
86ref|NM_140100.1| Drosophila melanogaster CG8177-RA, transcript v... 40 6.2
87gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map... 40 6.2
88gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell ... 40 6.2
89gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, compl... 40 6.2
90gb|AY060460.1| Drosophila melanogaster SD03289 full length cDNA 40 6.2
91tpg|BK005711.1| TPA: TPA_exp: Homo sapiens RPGR ORF15 isoform mR... 40 6.2
92gb|AF370594.1|AF370594 Arabidopsis thaliana putative protein pho... 40 6.2
93emb|BX819437.1|CNS0A8SK Arabidopsis thaliana Full-length cDNA Co... 40 6.2
94emb|BX819166.1|CNS0A8S1 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
95dbj|AB093267.2| Mus musculus mRNA for mKIAA0835 protein 40 6.2
96gb|AC084425.1|CBRG01B5 Caenorhabditis briggsae cosmid G01B5, com... 40 6.2
97gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, comp... 40 6.2
98gb|AF286472.1|AF286471S2 Homo sapiens retinitis pigmentosa GTPas... 40 6.2
99gb|AY855163.1| Gorilla gorilla RPGR mRNA, partial cds 40 6.2
100emb|AL928950.8| Mouse DNA sequence from clone RP23-70E1 on chrom... 40 6.2
101gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35... 40 6.2
102gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, co... 40 6.2
103dbj|AB082378.1| Mus musculus mRNA for neural zinc finger protein... 40 6.2
104gb|AF004294.1|AF004294 Mus musculus myelin transcription factor ... 40 6.2
105ref|NM_008665.2| Mus musculus myelin transcription factor 1 (Myt... 40 6.2
106dbj|AP005060.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.2
107emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chro... 40 6.2
108emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chro... 40 6.2
109emb|AL731857.9| Mouse DNA sequence from clone RP23-106A3 on chro... 40 6.2 
>gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds
          Length = 3269

 Score =  682 bits (344), Expect = 0.0
 Identities = 361/364 (99%), Gaps = 2/364 (0%)
 Strand = Plus / Plus

                                                                       
Query: 96  ggcagttgaggggctgaggaggtgaaagaaagaggcaacgaaagcacccatggtgatagc 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  ggcagttgaggggctgaggaggtgaaagaaagaggcaacgaaagcacccatggtgatagc 152

                                                                       
Query: 156 ttccggagtgattgacaggggacacctgtcctcgttcggcggcccaccgccagactcgtc 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ttccggagtgattgacaggggacacctgtcctcgttcggcggcccaccgccagactcgtc 212

                                                                       
Query: 216 gtcgtcgttcttctccgaagaccttgtccccacagagaggcaggttgggttctggaaatc 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gtcgtcgttcttctccgaagaccttgtccccacagagaggcaggttgggttctggaaatc 272

                                                                       
Query: 276 ggagtcaatggtggatcagagagggagcaagccagtttttgcttctccacttgagaagat 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggagtcaatggtggatcagagagggagcaagccagtttttgcttctccacttgagaagat 332

                                                                       
Query: 336 ccatccgacgggagcaaatcctgaaggcagtctggaacaaacagggggccaagtcttcaa 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ccatccgacgggagcaaatcctgaaggcagtctggaacaaacagggggccaagtcttcaa 392

                                                                       
Query: 396 gggcctagatgcccttcgcgtcagtaaggcgatggggc-aggaaatgcgtc-agttcgcc 453
           ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||
Sbjct: 393 gggcctagatgcccttcgcgtcagtaaagcgatggggcaaggaaatgcgtcaagttcgcc 452

               
Query: 454 atca 457
           ||||
Sbjct: 453 atca 456
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>dbj|AB244278.1| Oryza sativa (japonica cultivar-group) OML3 mRNA for MEI2-like RNA
           binding protein, complete cds
          Length = 2868

 Score =  129 bits (65), Expect = 9e-27
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 235 gaccttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcag 294
           ||||||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| 
Sbjct: 91  gaccttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcac 150

                                                                       
Query: 295 agagggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaat 354
           | |||||||||| |||||||||||||||||||||| |||||||| || |  |||||||||
Sbjct: 151 aaagggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaat 210

            
Query: 355 c 355
           |
Sbjct: 211 c 211



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 145 atggtgatagcttccggagtgattgacaggggacacctgtc 185
           |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 1   atggtgatagcttctggagccattgacaggaggcacctgtc 41
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>dbj|AK121634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050M15, full
           insert sequence
          Length = 3869

 Score =  129 bits (65), Expect = 9e-27
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 235 gaccttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcag 294
           ||||||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| 
Sbjct: 742 gaccttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcac 801

                                                                       
Query: 295 agagggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaat 354
           | |||||||||| |||||||||||||||||||||| |||||||| || |  |||||||||
Sbjct: 802 aaagggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaat 861

            
Query: 355 c 355
           |
Sbjct: 862 c 862



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 139 gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 185
           ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 646 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 692



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 52  ttgcttgcagtgcgggggaaggagga 77
           ||||||||||||||||||||| ||||
Sbjct: 191 ttgcttgcagtgcgggggaagaagga 216
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>dbj|AK120322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C20, full
           insert sequence
          Length = 3454

 Score =  129 bits (65), Expect = 9e-27
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 235 gaccttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcag 294
           ||||||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| 
Sbjct: 305 gaccttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcac 364

                                                                       
Query: 295 agagggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaat 354
           | |||||||||| |||||||||||||||||||||| |||||||| || |  |||||||||
Sbjct: 365 aaagggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaat 424

            
Query: 355 c 355
           |
Sbjct: 425 c 425



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 139 gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 185
           ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 209 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 255
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>dbj|AK074004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075L18, full
           insert sequence
          Length = 3468

 Score =  129 bits (65), Expect = 9e-27
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 235 gaccttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcag 294
           ||||||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| 
Sbjct: 341 gaccttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcac 400

                                                                       
Query: 295 agagggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaat 354
           | |||||||||| |||||||||||||||||||||| |||||||| || |  |||||||||
Sbjct: 401 aaagggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaat 460

            
Query: 355 c 355
           |
Sbjct: 461 c 461



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 139 gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 185
           ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 245 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 291
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>gb|AY579890.1| Hordeum vulgare AML6 gene, partial cds
          Length = 480

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 57/61 (93%), Gaps = 2/61 (3%)
 Strand = Plus / Plus

                                                                       
Query: 399 cctagatgcccttcgcgtcagtaaggcgatggggc-aggaaatgcgtc-agttcgccatc 456
           |||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||||
Sbjct: 2   cctagatgnccttcgcgtcagtaaagcgatggggcaaggaaatgcgtcaagttcgccatc 61

            
Query: 457 a 457
           |
Sbjct: 62  a 62
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 297    agggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 355
              |||||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 134425 agggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 134367



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 139    gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 185
              ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 135316 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 135270



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 251    agaggcaggttgggttctggaaatcggagtcaatggtggatca 293
              ||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 135097 agaggcaagttggattttggaattcagagtcaatggtggatca 135055



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 52     ttgcttgcagtgcgggggaaggagga 77
              ||||||||||||||||||||| ||||
Sbjct: 136188 ttgcttgcagtgcgggggaagaagga 136163
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 297   agggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 355
             |||||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 16613 agggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 16555



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 139   gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 185
             ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 17504 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 17458



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 251   agaggcaggttgggttctggaaatcggagtcaatggtggatca 293
             ||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 17285 agaggcaagttggattttggaattcagagtcaatggtggatca 17243



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 52    ttgcttgcagtgcgggggaaggagga 77
             ||||||||||||||||||||| ||||
Sbjct: 18376 ttgcttgcagtgcgggggaagaagga 18351
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
              complete sequence
          Length = 156772

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 297    agggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 355
              |||||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 134425 agggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 134367



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 139    gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 185
              ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 135316 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 135270



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 251    agaggcaggttgggttctggaaatcggagtcaatggtggatca 293
              ||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 135097 agaggcaagttggattttggaattcagagtcaatggtggatca 135055



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 52     ttgcttgcagtgcgggggaaggagga 77
              ||||||||||||||||||||| ||||
Sbjct: 136188 ttgcttgcagtgcgggggaagaagga 136163
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>gb|AY579885.1| Sorghum bicolor AML1 mRNA, complete cds
          Length = 3140

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 125/155 (80%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 223 ttcttctccgaagaccttgtccccacagagaggcaggttgggttctggaaatcg---gag 279
           ||||||||| | || || |||||||| |||||||| ||||| |||||||||||    | |
Sbjct: 477 ttcttctcccaggatctcgtccccactgagaggcaagttggattctggaaatcatcaggg 536

                                                                       
Query: 280 tcaatggtggatcagagagggagcaagccagtttttgcttctccacttgagaagatccat 339
           ||||||||  |||| | ||||||| ||||  ||||  ||||||||||||| ||| |||||
Sbjct: 537 tcaatggtccatcacaaagggagcgagcctattttcacttctccacttgataaggtccat 596

                                              
Query: 340 ccgacgggagcaaatcctgaaggcagtctggaaca 374
           |||| |||  ||| ||||| |||  ||||||||||
Sbjct: 597 ccgatgggctcaagtcctgcaggtggtctggaaca 631



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 139 gcacccatggtgatagcttccggagtgattgacaggggacacctgtcctcgtt 191
           ||||| ||||||||||| |||||||   |||||||| | ||||||||| ||||
Sbjct: 393 gcacctatggtgatagcatccggagccgttgacaggagccacctgtccccgtt 445
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>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence
          Length = 197719

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 68     ggaaggaggatggagaggaaggagaag 94
              |||||||||| ||||||||||||||||
Sbjct: 187609 ggaaggaggagggagaggaaggagaag 187635
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>gb|AC155304.4| Mus musculus BAC clone RP24-212I6 from chromosome 8, complete sequence
          Length = 165128

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 66    ggggaaggaggatggagaggaaggaga 92
             |||||||||||| ||||||||||||||
Sbjct: 83781 ggggaaggaggagggagaggaaggaga 83755
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>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence
          Length = 41204

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 68    ggaaggaggatggagaggaaggagaag 94
             |||||||||| ||||||||||||||||
Sbjct: 15120 ggaaggaggagggagaggaaggagaag 15094
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>ref|NM_142205.2| Drosophila melanogaster CG6130-RA (CG6130), mRNA
          Length = 1545

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 210 ctcgtcgtcgtcgttcttctccg 232
           |||||||||||||||||||||||
Sbjct: 286 ctcgtcgtcgtcgttcttctccg 264
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>gb|AC175195.2| Sporobolomyces roseus clone JGIBAIF-17H21, complete sequence
          Length = 35381

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 60   agtgcgggggaaggaggatggagagga 86
            |||||||||||||||||| ||||||||
Sbjct: 8217 agtgcgggggaaggaggagggagagga 8243
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>gb|AY051426.1| Drosophila melanogaster GH10346 full length cDNA
          Length = 1517

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 210 ctcgtcgtcgtcgttcttctccg 232
           |||||||||||||||||||||||
Sbjct: 240 ctcgtcgtcgtcgttcttctccg 218
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>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone
              BACR13A02, complete sequence
          Length = 166141

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 210    ctcgtcgtcgtcgttcttctccg 232
              |||||||||||||||||||||||
Sbjct: 141723 ctcgtcgtcgtcgttcttctccg 141745
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>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone
             BACR17K19, complete sequence
          Length = 167918

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 210   ctcgtcgtcgtcgttcttctccg 232
             |||||||||||||||||||||||
Sbjct: 41817 ctcgtcgtcgtcgttcttctccg 41839
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>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete
              sequence
          Length = 236375

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 210    ctcgtcgtcgtcgttcttctccg 232
              |||||||||||||||||||||||
Sbjct: 186155 ctcgtcgtcgtcgttcttctccg 186177
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>ref|NM_179270.1| Arabidopsis thaliana DNA binding AT1G06230 transcript variant
            AT1G06230.2 mRNA, complete cds
          Length = 3141

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 312  ttttgcttctccacttgagaag 333
            ||||||||||||||||||||||
Sbjct: 2573 ttttgcttctccacttgagaag 2552
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>ref|NM_100505.2| Arabidopsis thaliana DNA binding AT1G06230 transcript variant
            AT1G06230.1 mRNA, complete cds
          Length = 3194

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 312  ttttgcttctccacttgagaag 333
            ||||||||||||||||||||||
Sbjct: 2626 ttttgcttctccacttgagaag 2605
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>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence
          Length = 151577

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 65     gggggaaggaggatggagaggaaggagaag 94
              ||||| ||||||||| ||||||||||||||
Sbjct: 104638 ggggggaggaggatgaagaggaaggagaag 104609
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>emb|CR731558.2|CNS0GREZ Tetraodon nigroviridis full-length cDNA
          Length = 2145

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 210  ctcgtcgtcgtcgttcttctcc 231
            ||||||||||||||||||||||
Sbjct: 1077 ctcgtcgtcgtcgttcttctcc 1056
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>emb|CR728100.2|CNS0GOQY Tetraodon nigroviridis full-length cDNA
          Length = 2145

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 210  ctcgtcgtcgtcgttcttctcc 231
            ||||||||||||||||||||||
Sbjct: 1077 ctcgtcgtcgtcgttcttctcc 1056
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>emb|CR683307.2|CNS0FQ6V Tetraodon nigroviridis full-length cDNA
          Length = 1470

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 210 ctcgtcgtcgtcgttcttctcc 231
           ||||||||||||||||||||||
Sbjct: 617 ctcgtcgtcgtcgttcttctcc 596
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>gb|BC033353.1| Homo sapiens cDNA clone IMAGE:4828937
          Length = 2433

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 69   gaaggaggatggagaggaagga 90
            ||||||||||||||||||||||
Sbjct: 1132 gaaggaggatggagaggaagga 1153
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>emb|BX816821.1|CNS0AEK3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH6ZE12 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2748

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 312  ttttgcttctccacttgagaag 333
            ||||||||||||||||||||||
Sbjct: 2298 ttttgcttctccacttgagaag 2277
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>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 69    gaaggaggatggagaggaagga 90
             ||||||||||||||||||||||
Sbjct: 90267 gaaggaggatggagaggaagga 90246
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>gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 48872

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 312   ttttgcttctccacttgagaag 333
             ||||||||||||||||||||||
Sbjct: 35014 ttttgcttctccacttgagaag 34993
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>gb|AY391468.1| Danio rerio tubulin, alpha 2 (TUBA2) mRNA, complete cds
          Length = 1815

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1425 ggaggatggagaggaaggaga 1445
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>gb|BC067582.1| Danio rerio tubulin, alpha 8 like, mRNA (cDNA clone MGC:85698
            IMAGE:6962614), complete cds
          Length = 1843

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1430 ggaggatggagaggaaggaga 1450
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>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence
          Length = 219004

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 421    aaggcgatggggcaggaaatg 441
              |||||||||||||||||||||
Sbjct: 154226 aaggcgatggggcaggaaatg 154246
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>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence
          Length = 236164

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     gcagtgcgggggaaggaggatggag 82
              |||||| ||||||||||||||||||
Sbjct: 115648 gcagtgagggggaaggaggatggag 115624
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 308   cagtttttgcttctccacttgagaa 332
             |||||||||||||||||| ||||||
Sbjct: 75935 cagtttttgcttctccacctgagaa 75959
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>emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chromosome 10 Contains the 5'
              end of the PAX2 gene for paired box gene 2 and fifteen CpG
              islands, complete sequence
          Length = 187101

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    ccttgtccccacagagaggca 257
              |||||||||||||||||||||
Sbjct: 159691 ccttgtccccacagagaggca 159671
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>emb|CR858028.1| Pongo pygmaeus mRNA; cDNA DKFZp469L1915 (from clone DKFZp469L1915)
          Length = 4485

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1263 ggaggatggagaggaaggaga 1283
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>emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 in linkage group 8,
             complete sequence
          Length = 184723

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 72    ggaggatggagaggaaggaga 92
             |||||||||||||||||||||
Sbjct: 26961 ggaggatggagaggaaggaga 26941
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>gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, complete sequence
          Length = 126651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 72    ggaggatggagaggaaggaga 92
             |||||||||||||||||||||
Sbjct: 16676 ggaggatggagaggaaggaga 16656
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>ref|NM_212772.1| Danio rerio tubulin, alpha 8 like (tuba8l), mRNA
          Length = 1843

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1430 ggaggatggagaggaaggaga 1450
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 315     tgcttctccacttgagaagat 335
               |||||||||||||||||||||
Sbjct: 3064002 tgcttctccacttgagaagat 3064022
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>dbj|AB014577.1| Homo sapiens mRNA for KIAA0677 protein, partial cds
          Length = 4417

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1256 ggaggatggagaggaaggaga 1276
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>gb|AF169288.1|AF169288 Mus musculus beta-sarcoglycan gene, complete cds
          Length = 23497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 66   ggggaaggaggatggagagga 86
            |||||||||||||||||||||
Sbjct: 4502 ggggaaggaggatggagagga 4522
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>gb|BC002558.2| Homo sapiens jumonji domain containing 2A, mRNA (cDNA clone MGC:1972
            IMAGE:3138875), complete cds
          Length = 3454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1265 ggaggatggagaggaaggaga 1285
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>ref|NM_014663.1| Homo sapiens jumonji domain containing 2A (JMJD2A), mRNA
          Length = 4417

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   ggaggatggagaggaaggaga 92
            |||||||||||||||||||||
Sbjct: 1256 ggaggatggagaggaaggaga 1276
to top
>gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, complete sequence
          Length = 203266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     ggggaaggaggatggagagga 86
              |||||||||||||||||||||
Sbjct: 119154 ggggaaggaggatggagagga 119134
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>gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, complete sequence
          Length = 201027

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     ttccctctcctctcatctcttgcg 39
              |||||| |||||||||||||||||
Sbjct: 101298 ttccctttcctctcatctcttgcg 101275
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>ref|NM_128557.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/
           protein serine/threonine phosphatase AT2G30020 mRNA,
           complete cds
          Length = 1375

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  ggatggagaggaaggagaag 94
           ||||||||||||||||||||
Sbjct: 156 ggatggagaggaaggagaag 137
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>ref|XM_514528.1| PREDICTED: Pan troglodytes sorting nexin 5 (LOC458110), mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ggaaatcggagtcaatggtg 288
            ||||||||||||||||||||
Sbjct: 1837 ggaaatcggagtcaatggtg 1818
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>ref|XM_513098.1| PREDICTED: Pan troglodytes similar to Jumonji domain containing
           protein 2A (LOC456512), mRNA
          Length = 765

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gaggatggagaggaaggaga 92
           ||||||||||||||||||||
Sbjct: 529 gaggatggagaggaaggaga 548
to top
>gb|AY255687.1| Falco columbarius arylalkylamine N-acetyltransferase gene, partial
           cds
          Length = 1734

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  tggagaggaaggagaagtgg 97
           ||||||||||||||||||||
Sbjct: 624 tggagaggaaggagaagtgg 605
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>gb|AY255686.1| Falco peregrinus arylalkylamine N-acetyltransferase gene, partial
           cds
          Length = 1733

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  tggagaggaaggagaagtgg 97
           ||||||||||||||||||||
Sbjct: 624 tggagaggaaggagaagtgg 605
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>gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence
          Length = 163442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aaggaggatggagaggaagg 89
              ||||||||||||||||||||
Sbjct: 102623 aaggaggatggagaggaagg 102642
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>ref|NM_001034853.1| Homo sapiens retinitis pigmentosa GTPase regulator (RPGR), transcript
            variant C, mRNA
          Length = 4718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 2933 aggaggaaggagaggaaggagaag 2956
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>gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosome 14, complete sequence
          Length = 124918

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 5      gcataagcaacttccctctcctct 28
              |||||||| |||||||||||||||
Sbjct: 124213 gcataagctacttccctctcctct 124190
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>gb|BT012471.1| Drosophila melanogaster RE24802 full insert cDNA
          Length = 4948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 3978 ctcgtcgtcgtcgttcttct 3959
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>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence
          Length = 262048

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     gaaggaggatggagaggaaggaga 92
              ||||||||| ||||||||||||||
Sbjct: 187831 gaaggaggaaggagaggaaggaga 187808
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>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence
          Length = 214085

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   gggctgaggaggtgaaagaa 125
             ||||||||||||||||||||
Sbjct: 61096 gggctgaggaggtgaaagaa 61077
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>gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome 19, complete sequence
          Length = 202504

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     aggaggatggagaggaaggagaag 94
              ||||||| ||||||||||||||||
Sbjct: 187557 aggaggagggagaggaaggagaag 187534
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>gb|BT011364.1| Drosophila melanogaster RE66627 full insert cDNA
          Length = 4523

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4399 ctcgtcgtcgtcgttcttct 4380
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>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence
          Length = 222814

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    aggaggatggagaggaaggagaag 94
             ||||||| ||||||||||||||||
Sbjct: 31666 aggaggagggagaggaaggagaag 31643
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>gb|BC063252.1| Mus musculus myelin transcription factor 1, mRNA (cDNA clone
            MGC:66675 IMAGE:6406740), complete cds
          Length = 5324

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 1020 aggaggagggagaggaaggagaag 1043
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>gb|AC134535.4| Mus musculus BAC clone RP24-371E20 from chromosome 7, complete sequence
          Length = 214571

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ggatggagaggaaggagaag 94
              ||||||||||||||||||||
Sbjct: 126092 ggatggagaggaaggagaag 126111
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>gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, complete sequence
          Length = 202612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     aggaggatggagaggaaggagaag 94
              ||||||| ||||||||||||||||
Sbjct: 154237 aggaggaaggagaggaaggagaag 154214
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>gb|AC139154.3| Mus musculus chromosome 7 clone RP24-356B8, complete sequence
          Length = 164774

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   ggatggagaggaaggagaag 94
            ||||||||||||||||||||
Sbjct: 3634 ggatggagaggaaggagaag 3653
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>emb|BX323043.5| Human DNA sequence from clone CTD-2510L9 on chromosome 1, complete
             sequence
          Length = 41309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tggatcagagagggagcaag 306
             ||||||||||||||||||||
Sbjct: 28348 tggatcagagagggagcaag 28367
to top
>emb|AL606748.9| Human DNA sequence from clone RP13-43E11 on chromosome Xp21.1-21.3
             Contains the 5' end of the SRPX gene for a chromosome X
             sushi-repeat-containing protein, a novel gene, the RPGR
             gene for retinitis pigmentosa GTPase regulator, the 5' end
             of the OTC gene for ornithine carbamoyltransferase and two
             CpG islands, complete sequence
          Length = 141577

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    aggaggatggagaggaaggagaag 94
             ||||||| ||||||||||||||||
Sbjct: 73574 aggaggaaggagaggaaggagaag 73551
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>gb|AF133280.1|AF133277S5 Mus musculus B-cell leukemia/lymphoma x (Bclx) gene, exon 8 and
            alternatively spliced transcripts
          Length = 6938

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 67   gggaaggaggatggagaggaagga 90
            |||||||||| |||||||||||||
Sbjct: 3210 gggaaggagggtggagaggaagga 3233
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>gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatiblity complex extended
             and classical class II region, partial sequence
          Length = 132445

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    gggaaggaggatggagaggaagga 90
             ||||||||||||||||| ||||||
Sbjct: 76391 gggaaggaggatggagaagaagga 76368
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>emb|AJ318463.1|HSA318463 Homo sapiens RPGR gene for retinitis pigmentosa GTPase regulator, exons
             1-19
          Length = 77581

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    aggaggatggagaggaaggagaag 94
             ||||||| ||||||||||||||||
Sbjct: 48001 aggaggaaggagaggaaggagaag 48024
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>gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, complete sequence
          Length = 165122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 66    ggggaaggaggatggagaggaaggagaa 93
             |||| ||||||| |||||||||||||||
Sbjct: 95660 gggggaggaggagggagaggaaggagaa 95633
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>gb|AY119555.1| Drosophila melanogaster GH28665 full insert cDNA
          Length = 3697

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 2711 ctcgtcgtcgtcgttcttct 2692
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>dbj|AK126916.1| Homo sapiens cDNA FLJ44968 fis, clone BRAWH2016562
          Length = 2765

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 66  ggggaaggaggatggagaggaaggagaa 93
           |||| ||||||| |||||||||||||||
Sbjct: 661 gggggaggaggagggagaggaaggagaa 634
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>ref|NM_206314.1| Drosophila melanogaster CG8177-RH, transcript variant H (CG8177),
            mRNA
          Length = 4015

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 3905 ctcgtcgtcgtcgttcttct 3886
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>ref|NM_206313.1| Drosophila melanogaster CG8177-RI, transcript variant I (CG8177),
            mRNA
          Length = 4189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4079 ctcgtcgtcgtcgttcttct 4060
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>ref|NM_206312.1| Drosophila melanogaster CG8177-RJ, transcript variant J (CG8177),
            mRNA
          Length = 3910

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 3800 ctcgtcgtcgtcgttcttct 3781
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>ref|NM_206311.1| Drosophila melanogaster CG8177-RK, transcript variant K (CG8177),
            mRNA
          Length = 4111

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4001 ctcgtcgtcgtcgttcttct 3982
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>gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, complete sequence
          Length = 195110

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aagaggcaacgaaagcaccc 144
             ||||||||||||||||||||
Sbjct: 61054 aagaggcaacgaaagcaccc 61035
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>gb|AC007920.18| Homo sapiens 3 BAC RP11-208N14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173534

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agttgaggggctgaggaggt 118
             ||||||||||||||||||||
Sbjct: 42382 agttgaggggctgaggaggt 42363
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>ref|NM_168374.1| Drosophila melanogaster CG8177-RD, transcript variant D (CG8177),
            mRNA
          Length = 3819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 3709 ctcgtcgtcgtcgttcttct 3690
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>ref|NM_168373.1| Drosophila melanogaster CG8177-RE, transcript variant E (CG8177),
            mRNA
          Length = 4895

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 3910 ctcgtcgtcgtcgttcttct 3891
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>ref|NM_168372.1| Drosophila melanogaster CG8177-RF, transcript variant F (CG8177),
            mRNA
          Length = 4509

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4399 ctcgtcgtcgtcgttcttct 4380
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>ref|NM_168371.1| Drosophila melanogaster CG8177-RC, transcript variant C (CG8177),
            mRNA
          Length = 4235

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4125 ctcgtcgtcgtcgttcttct 4106
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>ref|NM_168370.1| Drosophila melanogaster CG8177-RB, transcript variant B (CG8177),
            mRNA
          Length = 4088

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 3978 ctcgtcgtcgtcgttcttct 3959
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>ref|NM_168369.1| Drosophila melanogaster CG8177-RG, transcript variant G (CG8177),
            mRNA
          Length = 5585

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4600 ctcgtcgtcgtcgttcttct 4581
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>gb|AC079015.8| Homo sapiens chromosome 8, clone RP11-489O18, complete sequence
          Length = 157122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gaggcaggttgggttctgga 271
             ||||||||||||||||||||
Sbjct: 42319 gaggcaggttgggttctgga 42338
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>ref|NM_140100.1| Drosophila melanogaster CG8177-RA, transcript variant A (CG8177),
            mRNA
          Length = 5164

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 4179 ctcgtcgtcgtcgttcttct 4160
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>gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map m283, complete
             sequence
          Length = 88543

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ggatggagaggaaggagaag 94
             ||||||||||||||||||||
Sbjct: 26596 ggatggagaggaaggagaag 26615
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>gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179838

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    ctcgtcgtcgtcgttcttct 229
              ||||||||||||||||||||
Sbjct: 123725 ctcgtcgtcgtcgttcttct 123706
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>gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, complete sequence
          Length = 182622

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     gaggatggagaggaaggaga 92
              ||||||||||||||||||||
Sbjct: 114765 gaggatggagaggaaggaga 114784
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>gb|AY060460.1| Drosophila melanogaster SD03289 full length cDNA
          Length = 2930

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  ctcgtcgtcgtcgttcttct 229
            ||||||||||||||||||||
Sbjct: 2804 ctcgtcgtcgtcgttcttct 2785
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>tpg|BK005711.1| TPA: TPA_exp: Homo sapiens RPGR ORF15 isoform mRNA, complete cds,
            alternatively spliced
          Length = 4606

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 2824 aggaggaaggagaggaaggagaag 2847
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>gb|AF370594.1|AF370594 Arabidopsis thaliana putative protein phosphatase 2C (At2g30020;
           F23F1.6) mRNA, complete cds
          Length = 1191

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  ggatggagaggaaggagaag 94
           ||||||||||||||||||||
Sbjct: 156 ggatggagaggaaggagaag 137
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>emb|BX819437.1|CNS0A8SK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZG02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  ggatggagaggaaggagaag 94
           ||||||||||||||||||||
Sbjct: 110 ggatggagaggaaggagaag 91
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>emb|BX819166.1|CNS0A8S1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB53ZC09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1342

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  ggatggagaggaaggagaag 94
           ||||||||||||||||||||
Sbjct: 152 ggatggagaggaaggagaag 133
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>dbj|AB093267.2| Mus musculus mRNA for mKIAA0835 protein
          Length = 5119

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  aggaggatggagaggaaggagaag 94
           ||||||| ||||||||||||||||
Sbjct: 951 aggaggagggagaggaaggagaag 974
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>gb|AC084425.1|CBRG01B5 Caenorhabditis briggsae cosmid G01B5, complete sequence
          Length = 42310

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   gaggaggtgaaagaaagagg 130
             ||||||||||||||||||||
Sbjct: 25887 gaggaggtgaaagaaagagg 25868
to top
>gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, complete sequence
          Length = 152530

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aagaggcaacgaaagcaccc 144
              ||||||||||||||||||||
Sbjct: 130335 aagaggcaacgaaagcaccc 130316
to top
>gb|AF286472.1|AF286471S2 Homo sapiens retinitis pigmentosa GTPase regulator (RPGR) gene, exon
            ORF15 partial cds
          Length = 2834

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 1012 aggaggaaggagaggaaggagaag 1035
to top
>gb|AY855163.1| Gorilla gorilla RPGR mRNA, partial cds
          Length = 1650

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  aggaggatggagaggaaggagaag 94
           ||||||| ||||||||||||||||
Sbjct: 938 aggaggaaggagaggaaggagaag 961
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>emb|AL928950.8| Mouse DNA sequence from clone RP23-70E1 on chromosome 2, complete
             sequence
          Length = 157063

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gaggatggagaggaaggaga 92
             ||||||||||||||||||||
Sbjct: 45308 gaggatggagaggaaggaga 45327
to top
>gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35 of 83 of the complete
             sequence
          Length = 304975

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctcgtcgtcgtcgttcttct 229
             ||||||||||||||||||||
Sbjct: 22507 ctcgtcgtcgtcgttcttct 22488
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>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence
          Length = 190623

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 5      gcataagcaacttccctctcctct 28
              |||||||| |||||||||||||||
Sbjct: 171926 gcataagctacttccctctcctct 171949
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>dbj|AB082378.1| Mus musculus mRNA for neural zinc finger protein NZF-2b, complete cds
          Length = 5510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 1231 aggaggagggagaggaaggagaag 1254
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>gb|AF004294.1|AF004294 Mus musculus myelin transcription factor 1 mRNA, complete cds
          Length = 5466

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 1211 aggaggagggagaggaaggagaag 1234
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>ref|NM_008665.2| Mus musculus myelin transcription factor 1 (Myt1), mRNA
          Length = 5510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   aggaggatggagaggaaggagaag 94
            ||||||| ||||||||||||||||
Sbjct: 1231 aggaggagggagaggaaggagaag 1254
to top
>dbj|AP005060.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-637N19, complete
            sequence
          Length = 107942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   ggatggagaggaaggagaag 94
            ||||||||||||||||||||
Sbjct: 4567 ggatggagaggaaggagaag 4586
to top
>emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chromosome 2, complete
             sequence
          Length = 205358

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ttgaggggctgaggaggtga 120
             ||||||||||||||||||||
Sbjct: 19619 ttgaggggctgaggaggtga 19638
to top
>emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chromosome 2, complete
              sequence
          Length = 194770

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     aggaggatggagaggaaggagaag 94
              ||||||| ||||||||||||||||
Sbjct: 106127 aggaggagggagaggaaggagaag 106150
to top
>emb|AL731857.9| Mouse DNA sequence from clone RP23-106A3 on chromosome 2, complete
              sequence
          Length = 157220

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     gggaaggaggatggagaggaagga 90
              |||||||||| |||||||||||||
Sbjct: 106465 gggaaggagggtggagaggaagga 106488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,382,751
Number of Sequences: 3902068
Number of extensions: 4382751
Number of successful extensions: 119946
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119634
Number of HSP's gapped (non-prelim): 312
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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