>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 3 (EC
           3.6.1.-) (SMARCA3-like protein 3)
          Length = 1277

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +1

Query: 166 MGKSSKKNKVILAPPLPPDVDDEDILVSDEDVDFVEENREHVHL 297
           +GK+     +ILA P   + ++ED+LV+D + D  + NR+ +H+
Sbjct: 691 LGKTVMTIALILARPGRGNPENEDVLVADVNAD--KRNRKEIHM 732

>IF2_PARUW (Q6MD64) Translation initiation factor IF-2|
          Length = 920

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +1

Query: 82  FLLPRP*NLRGQRPLRGSSTHSRFVSYSMGKSSKKNKVILAPPLPPDVDDEDILVSDED 258
           F+ P+P   R  RPL  ++++ + VS +  +   KNK+    P     ++  +L +D+D
Sbjct: 210 FIKPKPQPERVSRPLEANNSNQKEVSEANKEKLDKNKI---KPKSKGFEEPKVLTADDD 265

>FKBP3_YARLI (Q6C4C9) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 407

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 220 DVDDEDILVSDEDVDFVEENREHVHLITGLNRKALDKVVTRVPDHDEDK 366
           D DDED    DED +   E+   +  +   N   LD+V     D D+D+
Sbjct: 71  DEDDEDEDDDDEDDEVSAEDMAQIKKLIAANEDGLDEVEGGDDDEDDDE 119

>CTN3_HUMAN (Q9UI47) Alpha-3 catenin (Alpha T-catenin) (Cadherin-associated|
           protein)
          Length = 895

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 42  RLPLPGRKDLRPPLSPTATVKLARSASASGKLNPLQICVVFHG 170
           R+  P +K L     P  T    R  SA  K++PLQ+   F G
Sbjct: 849 RMKAPAKKPLIKREKPEETCAAVRRGSAKKKIHPLQVMSEFRG 891

>Y585_ARCFU (O29670) Hypothetical protein AF0585|
          Length = 90

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/42 (26%), Positives = 27/42 (64%)
 Frame = -2

Query: 303 GDQVDVLSILLDEIHILVGDQDVLVVDIRRQRRREDDLVLLA 178
           GD  D+L+++L  I++L+G   ++ +    +R +++ L+ L+
Sbjct: 2   GDYFDILTLILTAIYLLIGGGFIIYIYDTYKRTKQEFLIYLS 43

>SYI_HALSA (Q9HN97) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 1070

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 199  LAPPLPPDVDDEDILVSDEDVDFVEENREHV 291
            LA  +  D+  +DI ++ E V+FVEE  EHV
Sbjct: 932  LAEQVAADLGRDDIELTTEMVEFVEETPEHV 962

>MSCL_XYLFT (Q87FA1) Large-conductance mechanosensitive channel|
          Length = 134

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 187 NKVILAPPLPPDVDDEDILVSDEDVDFVEE 276
           NKVI   PLPP+   ED+L+  E  D +++
Sbjct: 105 NKVINKQPLPPETPSEDVLLLREIRDSLKK 134

>MSCL_XYLFA (Q9PHA5) Large-conductance mechanosensitive channel|
          Length = 134

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 187 NKVILAPPLPPDVDDEDILVSDEDVDFVEE 276
           NKVI   PLPP+   ED+L+  E  D +++
Sbjct: 105 NKVINKQPLPPETPSEDVLLLREIRDSLKK 134

>CP19A_MOUSE (P28649) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -2

Query: 291 DVLSILLDEIHILVGDQDVLVVDIR 217
           +V + +L EIH +VGD+D+ + DI+
Sbjct: 327 EVEAAILKEIHTVVGDRDIKIEDIQ 351

>COG4_YEAST (Q06096) Conserved oligomeric Golgi complex component 4 (Complexed|
           with DOR1 protein 1) (SEC38 protein)
          Length = 861

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
 Frame = +1

Query: 124 LRGSSTHSRFVSYSMGKSSKKNKVILAPPLPPDVDDEDILVSDEDVDFVEENREHVHLIT 303
           L+  S +SRF S    + S  +  +L PP PP  D +  L   +D  F E     V ++ 
Sbjct: 382 LQNWSMYSRFYSVKWNEFSDLHPHVLQPP-PPIADGKFALKLKQDKVFDE---FQVFVLN 437

Query: 304 GLNRK-----------ALDKVVTRVPDHDEDKV 369
            L R            +L+ ++T VP +D D +
Sbjct: 438 HLQRSFRNSISLEELPSLNDLITAVPLNDHDNI 470

>Y250_AQUAE (O66611) Hypothetical protein aq_250|
          Length = 145

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 95  DRETCEVSVRFGEAQPTPDLCRIPWGR 175
           ++ T  +  R GE  P P LC IPW R
Sbjct: 79  EKGTYGICERCGEEIPEPRLCAIPWTR 105

>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 127 RGSSTHSRFVSYSMGKSSKKNKVILAP 207
           +G+S  + F SY MG+    ++V+LAP
Sbjct: 5   QGNSNETLFSSYKMGRFDLSHRVVLAP 31

>NTP2_MCV1 (Q98218) Nucleoside triphosphatase II (EC 3.6.1.15) (NTPase II)|
           (Nucleoside triphosphate phosphohydrolase II) (NPH II)
          Length = 684

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -2

Query: 282 SILLDEIHILVGDQDVLVVDIRRQRRREDDLVLLAA 175
           +++LDE+H      D+++  +R  R R D +VL++A
Sbjct: 304 TVILDEVHEHDQMADIMLAVLRVHRARVDSIVLMSA 339

>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)|
            (Proliferation-related protein p80) [Contains: MAP1 light
            chain LC2]
          Length = 2805

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 199  LAPPLPPDVDDEDILVSDEDVDFV 270
            L PPLPP +DD D+  S E+V  V
Sbjct: 2453 LNPPLPPSIDDRDL--STEEVRLV 2474

>MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin)
          Length = 596

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 199 LAPPLPPDVDDEDILVSDEDVDFVEENREHVHL 297
           + PPLPPD+   DI+      DF + + + + +
Sbjct: 487 IPPPLPPDIPSFDIIADSLSFDFKDTDMKRLSM 519

>KPR1_YEAST (P32895) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 1)
          Length = 427

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 226 DDEDILVSDEDVDFVEENREHVHLITGLNRKALDKVVTRVPDHDEDKV 369
           DDE    +D+D D + E+   +H I GL+   L      V   DE+++
Sbjct: 258 DDE----ADDDEDAILESDSELHSIDGLDSHGLGGTYDAVDSEDEEEI 301

>RT13_TOBAC (P05488) Mitochondrial ribosomal protein S13|
          Length = 116

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -2

Query: 273 LDEIHILVGDQDVLVVDIRRQRRREDDLVLLAALPHGIRHKSG 145
           +D+I  ++G   V+  +++R  R + + ++  +   GIRH+ G
Sbjct: 53  IDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRHQDG 95

>PSRC_WOLSU (P31077) Polysulfide reductase chain C (Sulfur reductase chain C)|
          Length = 317

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 192 LVLLAALPHGIRHKSG 145
           +VL  ALPHGI+H SG
Sbjct: 273 VVLNVALPHGIKHSSG 288

>CP19A_RAT (P22443) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 508

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -2

Query: 291 DVLSILLDEIHILVGDQDVLVVDIR 217
           +V + +L EIH +VGD+D+ + D++
Sbjct: 327 EVETAILKEIHTVVGDRDIRIGDVQ 351

>CTN3_MOUSE (Q65CL1) Alpha-3 catenin (Alpha T-catenin) (Cadherin-associated|
           protein)
          Length = 895

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 42  RLPLPGRKDLRPPLSPTATVKLARSASASGKLNPLQICVVFHG 170
           R+  P +K L     P  T    R  SA  K++P+Q+   F G
Sbjct: 849 RMKAPAKKPLIKREKPEETWAAVRRGSAKKKIHPVQVMSEFRG 891

>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC|
           3.6.3.14) (V-ATPase 101 kDa subunit) (V-ATPase subunit
           AC115) (Similar to VPH1 protein 1)
          Length = 890

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 247 SDEDVDFVEENREHVHLITGLNRKALDKVVTRV 345
           S ED+ F+E+  +H ++ITG  R+    ++ R+
Sbjct: 223 SVEDLSFLEQGYQHRYMITGSIRRTKVDILNRI 255

>KN8R_YEAST (P53739) Probable serine/threonine-protein kinase YNR047W (EC|
           2.7.11.1)
          Length = 893

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +1

Query: 115 QRPLRG-SSTHSRFVSYSMGKSSKKNKVILAPPLPPDVDDEDILVSDE--DVDFVEENRE 285
           Q  L G S++ S  + Y    +S  N    +PPL P + + D+L + +   +D  E  RE
Sbjct: 110 QSSLEGDSASSSSKLRYVKPMTSVANASPASPPLSPTIPETDVLQTPKMVHIDQHEHERE 169

Query: 286 H 288
           H
Sbjct: 170 H 170

>RT13_OENBE (P15758) Mitochondrial ribosomal protein S13|
          Length = 114

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/64 (23%), Positives = 31/64 (48%)
 Frame = -2

Query: 273 LDEIHILVGDQDVLVVDIRRQRRREDDLVLLAALPHGIRHKSGVG*ASPKRTLTSQVSRS 94
           +D+I  + G   V+  +++R  R + +  +  +   GIRH+ G+     +    ++ SR 
Sbjct: 51  IDQIEQMRGQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRSHTNARTSRK 110

Query: 93  R*EK 82
           R  K
Sbjct: 111 RIRK 114

>HSP11_WHEAT (P12810) 16.9 kDa class I heat shock protein (Low molecular weight|
           heat shock protein) (Heat shock protein 17) (HSP 16.9)
          Length = 151

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 297 QVDVLSILLDEIHILVGDQDVLVVDIRRQRRRED 196
           +VD+  +  +E+ + V D +VLVV   R R +ED
Sbjct: 58  KVDLPGVKKEEVKVEVEDGNVLVVSGERSREKED 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,436,995
Number of Sequences: 219361
Number of extensions: 682777
Number of successful extensions: 3058
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3049
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)